FFCP PHASE1:Mm9::chr19:5637708..5637730,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr19:5637708..5637730,+ to FFCP PHASE1:Mm9::chr19:5637708..5637730,+: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=19697 | |EntrezGene=19697 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q4U113 | |UniProt=Q4U113 | ||
|association_with_transcript=-28bp_to_ENSMUST00000096317_5end | |||
|cluster_id=chr19:5637708..5637730,+ | |||
|description=CAGE_peak_3_at_Rela_5end | |||
|id=chr19:5637708..5637730,+ | |||
|ontology_enrichment_celltype=CL:0002031!1.84e-07!25;CL:0000219!2.65e-07!54;CL:0002320!5.82e-07!46;CL:0000134!5.82e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.84e-07,25;CL:0000219,2.65e-07,54;CL:0002320,5.82e-07,46;CL:0000134,5.82e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.92e-11!48;UBERON:0002390!1.66e-10!45;UBERON:0003061!1.66e-10!45;UBERON:0002405!7.32e-10!70;UBERON:0000063!5.58e-08!35;UBERON:0007023!1.06e-07!51;UBERON:0004177!1.64e-07!29;UBERON:0006562!4.61e-07!24;UBERON:0001557!4.61e-07!24;UBERON:0001042!4.61e-07!24;UBERON:0008814!4.61e-07!24;UBERON:0009145!4.61e-07!24;UBERON:0002384!5.82e-07!46;UBERON:0003408!7.41e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.92e-11,48;UBERON:0002405,8.92e-11,48;UBERON:0002390,1.66e-10,45;UBERON:0003061,1.66e-10,45;UBERON:0000077,5.59e-09,35;UBERON:0007023,1.06e-07,51;UBERON:0004177,1.64e-07,29;UBERON:0005057,1.64e-07,29;UBERON:0004119,2.88e-07,118;UBERON:0000925,2.88e-07,118;UBERON:0006595,2.88e-07,118;UBERON:0006562,4.61e-07,24;UBERON:0001557,4.61e-07,24;UBERON:0001042,4.61e-07,24;UBERON:0008814,4.61e-07,24;UBERON:0009145,4.61e-07,24;UBERON:0002384,5.82e-07,46;UBERON:0004921,6.33e-07,114;UBERON:0001007,6.95e-07,116;UBERON:0001555,6.95e-07,116;UBERON:0007026,6.95e-07,116;UBERON:0003408,7.41e-07,24 | |||
|phase1_expression=4.00372117761985,7.67745896806594,10.9199817453489,7.86406949397758,7.01254021924886,6.71517087647559,5.84031601488814,15.3656754895476,11.9670413828917,9.83071010552373,10.1018601253048,6.38177271962691,20.5440875917447,19.4073293370174,11.9919514253639,16.4004966585759,15.3903613188192,16.4040325986284,16.5908464662944,10.6097412949508,11.7359740408476,7.84398514486994,5.74639536105658,9.11956809922418,7.57050627521661,3.44539178469012,6.8921919385452,6.89507944594845,12.5415456841207,8.56902441183765,5.09980174507201,6.35030673459631,12.916360539276,31.6963362030877,4.91047753577167,3.15845826181135,3.06254034393554,16.7412652294763,11.720030167857,11.5175223674236,14.1175557127443,12.294818729252,16.5073520030592,9.19046771221714,10.8473316404881,6.24058957349717,33.6428278069657,9.59310688073965,10.1055644057857,13.9989527333484,10.2190087786515,5.75010257459886,19.2949996966397,27.5637613964311,33.9454737133889,9.77585856936598,12.6074713573053,12.8918023069361,6.47412674750713,6.34789175126439,10.775133859605,16.2645375393183,14.2287167377782,25.6471419425199,25.7105254267413,26.9982443679518,17.3768064100675,14.2160772968975,5.18448061542388,5.40023753326763,5.67877395648731,6.85562362569129,6.84692476950002,4.65465037016825,5.17565543498476,7.35375029288017,6.60695285996332,6.63974158042976,4.76180253094355,5.40733779693795,4.48289453651807,4.16730696445408,7.53794097303729,5.6276261003168,4.73674568108111,5.30331453852602,5.97961059356232,5.21918448310842,8.32988126665025,7.78387069099891,12.4641730141721,7.74381489283248,8.83962733820076,10.2543606411185,10.3964226791627,13.8888335000174,10.5333315098814,16.0204503223374,14.8078022623635,14.1335829804136,4.50698943285378,24.3820307087204,12.7402619853323,14.2213340630666,10.6080610095495,10.8944742154292,5.05524445014783,9.1347103775248,31.0725460376606,11.4300447079915,6.59244241711316,7.61163695780353,8.99400439298628,5.42601505989441,6.70255630673517,8.92232798440696,19.7755974187499,9.9773556274739,16.8076004870476,8.41187619726528,10.3795513676385,9.69750506270444,26.0948465705371,14.0534782565543,9.63454851341893,15.8383374229327,5.63131085177825,7.7987355029143,5.20987930999565,5.69204429738326,4.57500602818627,7.53926112677186,7.47444576826789,3.83573185995496,8.51930982694196,5.84068547043927,6.92507674182151,10.2013715900276,14.6579199891531,15.7831391914855,4.55421550369463,2.5289231487682,4.68161537493908,6.48030716693575,4.69451844144162,5.38077625196369,6.09061209638237,10.8655415710387,4.31135985865684,5.8622884852024,8.97350733236139,7.01426343768239,8.89751197521913,10.447564995665,10.906453229621,7.76233640592123,3.51106593656617,4.11756651383544,3.9782889915383,6.21377317606506,5.15957331958412,3.96136535214233,6.8655973319711,5.1158700254325,5.86215028972037,6.74348439776183,5.09719462659276,4.2035523252181,5.75959474697182,4.43252153013557,7.70153690685629,8.04099930839328,6.36695334344047,5.77087600669599,5.67782861123144,5.76265829323993,19.8251269790279,13.4869788998408,5.11891801284562,6.73486348395272,7.98978260196979,9.07575860805041,10.4517680607089,9.13083005340284,8.54152310780121,15.152303834609,9.55073793441024,11.7384318504279,10.7230247915516,5.39291645192533,9.29393614461185,12.5459002150251,5.69003702859245,5.1411830674378,10.1436962105772,3.86937522906097,6.20647958936402,5.75113723100612,6.82954600941979,10.3327103585722,8.32093257559286,7.03363834354263,10.3758419480502,7.50802975722423,8.84515478009414,8.7696223830093,11.3601667977562,12.7823894668781,6.11102044275408,8.34318798607351,5.67473293712624,7.4131581560782,4.31304619582064,10.4199465347181,11.2333562321242,8.08252409430758,10.4050499842709,8.68398338454061,18.4753190166605,4.73728529426212,6.19266910479698,4.92260748748046,6.57132695207806,10.3853879613926,9.75978927632656,10.3420833364633,10.8768249433272,7.75126413770712,11.4807433433391,11.1427054006702,13.296743603674,13.5970115066621,16.5870412333199,17.4049818821987,9.83528546038072,11.313406598494,8.83028244932856,7.14991288212439,6.06559297893699,4.54447668967871,5.99465616890888,5.46614242015294,8.61693590931196,6.21318874676635,7.5751549188014,3.96307143104365,6.47697122679831,7.89090816360542,7.90575555893047,6.10510501201433,9.9358059645788,8.01295216502649,6.51547837414304,11.8778488540226,10.619611067197,7.04063844849446,4.53485335447127,5.28094223316515,10.0402643579463,11.6825356218692,8.78656196771952,7.63420831902762,5.70395805415554,8.21695570633122,5.27093042874994,3.09406629744561,10.2131881726136,4.68158844481407,7.63216234318252,6.21577401591618,6.7389288784064,8.38333442729732,5.59466670047211,11.2652031172402,12.2029288193129,11.0152676849186,15.2164594657924,25.8871417118124,14.0474051225438,13.6910339586914,15.2796600324015,16.4140899745061,12.8251568117134,7.78786268444141,15.3783792718067,7.84270098260245,10.7412825874433,13.3741604473331,13.1226458612184,10.066239621087,5.09935289981566,7.69732987780119,6.08079884739465,22.9120948323627,5.535879887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| |phase1_expression=4.00372117761985,7.67745896806594,10.9199817453489,7.86406949397758,7.01254021924886,6.71517087647559,5.84031601488814,15.3656754895476,11.9670413828917,9.83071010552373,10.1018601253048,6.38177271962691,20.5440875917447,19.4073293370174,11.9919514253639,16.4004966585759,15.3903613188192,16.4040325986284,16.5908464662944,10.6097412949508,11.7359740408476,7.84398514486994,5.74639536105658,9.11956809922418,7.57050627521661,3.44539178469012,6.8921919385452,6.89507944594845,12.5415456841207,8.56902441183765,5.09980174507201,6.35030673459631,12.916360539276,31.6963362030877,4.91047753577167,3.15845826181135,3.06254034393554,16.7412652294763,11.720030167857,11.5175223674236,14.1175557127443,12.294818729252,16.5073520030592,9.19046771221714,10.8473316404881,6.24058957349717,33.6428278069657,9.59310688073965,10.1055644057857,13.9989527333484,10.2190087786515,5.75010257459886,19.2949996966397,27.5637613964311,33.9454737133889,9.77585856936598,12.6074713573053,12.8918023069361,6.47412674750713,6.34789175126439,10.775133859605,16.2645375393183,14.2287167377782,25.6471419425199,25.7105254267413,26.9982443679518,17.3768064100675,14.2160772968975,5.18448061542388,5.40023753326763,5.67877395648731,6.85562362569129,6.84692476950002,4.65465037016825,5.17565543498476,7.35375029288017,6.60695285996332,6.63974158042976,4.76180253094355,5.40733779693795,4.48289453651807,4.16730696445408,7.53794097303729,5.6276261003168,4.73674568108111,5.30331453852602,5.97961059356232,5.21918448310842,8.32988126665025,7.78387069099891,12.4641730141721,7.74381489283248,8.83962733820076,10.2543606411185,10.3964226791627,13.8888335000174,10.5333315098814,16.0204503223374,14.8078022623635,14.1335829804136,4.50698943285378,24.3820307087204,12.7402619853323,14.2213340630666,10.6080610095495,10.8944742154292,5.05524445014783,9.1347103775248,31.0725460376606,11.4300447079915,6.59244241711316,7.61163695780353,8.99400439298628,5.42601505989441,6.70255630673517,8.92232798440696,19.7755974187499,9.9773556274739,16.8076004870476,8.41187619726528,10.3795513676385,9.69750506270444,26.0948465705371,14.0534782565543,9.63454851341893,15.8383374229327,5.63131085177825,7.7987355029143,5.20987930999565,5.69204429738326,4.57500602818627,7.53926112677186,7.47444576826789,3.83573185995496,8.51930982694196,5.84068547043927,6.92507674182151,10.2013715900276,14.6579199891531,15.7831391914855,4.55421550369463,2.5289231487682,4.68161537493908,6.48030716693575,4.69451844144162,5.38077625196369,6.09061209638237,10.8655415710387,4.31135985865684,5.8622884852024,8.97350733236139,7.01426343768239,8.89751197521913,10.447564995665,10.906453229621,7.76233640592123,3.51106593656617,4.11756651383544,3.9782889915383,6.21377317606506,5.15957331958412,3.96136535214233,6.8655973319711,5.1158700254325,5.86215028972037,6.74348439776183,5.09719462659276,4.2035523252181,5.75959474697182,4.43252153013557,7.70153690685629,8.04099930839328,6.36695334344047,5.77087600669599,5.67782861123144,5.76265829323993,19.8251269790279,13.4869788998408,5.11891801284562,6.73486348395272,7.98978260196979,9.07575860805041,10.4517680607089,9.13083005340284,8.54152310780121,15.152303834609,9.55073793441024,11.7384318504279,10.7230247915516,5.39291645192533,9.29393614461185,12.5459002150251,5.69003702859245,5.1411830674378,10.1436962105772,3.86937522906097,6.20647958936402,5.75113723100612,6.82954600941979,10.3327103585722,8.32093257559286,7.03363834354263,10.3758419480502,7.50802975722423,8.84515478009414,8.7696223830093,11.3601667977562,12.7823894668781,6.11102044275408,8.34318798607351,5.67473293712624,7.4131581560782,4.31304619582064,10.4199465347181,11.2333562321242,8.08252409430758,10.4050499842709,8.68398338454061,18.4753190166605,4.73728529426212,6.19266910479698,4.92260748748046,6.57132695207806,10.3853879613926,9.75978927632656,10.3420833364633,10.8768249433272,7.75126413770712,11.4807433433391,11.1427054006702,13.296743603674,13.5970115066621,16.5870412333199,17.4049818821987,9.83528546038072,11.313406598494,8.83028244932856,7.14991288212439,6.06559297893699,4.54447668967871,5.99465616890888,5.46614242015294,8.61693590931196,6.21318874676635,7.5751549188014,3.96307143104365,6.47697122679831,7.89090816360542,7.90575555893047,6.10510501201433,9.9358059645788,8.01295216502649,6.51547837414304,11.8778488540226,10.619611067197,7.04063844849446,4.53485335447127,5.28094223316515,10.0402643579463,11.6825356218692,8.78656196771952,7.63420831902762,5.70395805415554,8.21695570633122,5.27093042874994,3.09406629744561,10.2131881726136,4.68158844481407,7.63216234318252,6.21577401591618,6.7389288784064,8.38333442729732,5.59466670047211,11.2652031172402,12.2029288193129,11.0152676849186,15.2164594657924,25.8871417118124,14.0474051225438,13.6910339586914,15.2796600324015,16.4140899745061,12.8251568117134,7.78786268444141,15.3783792718067,7.84270098260245,10.7412825874433,13.3741604473331,13.1226458612184,10.066239621087,5.09935289981566,7.69732987780119,6.08079884739465,22.9120948323627,5.535879887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| ||
|short_description=p3@Rela | |||
}} | }} |
Latest revision as of 00:06, 26 September 2015
Short description: | p3@Rela |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rela_5end |
Coexpression cluster: | NA |
Association with transcript: | -28bp_to_ENSMUST00000096317_5end |
EntrezGene: | Rela |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.84e-07 | 25 |
motile cell | 2.65e-07 | 54 |
connective tissue cell | 5.82e-07 | 46 |
mesenchymal cell | 5.82e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.92e-11 | 48 |
immune system | 8.92e-11 | 48 |
hematopoietic system | 1.66e-10 | 45 |
blood island | 1.66e-10 | 45 |
mixed endoderm/mesoderm-derived structure | 5.59e-09 | 35 |
adult organism | 1.06e-07 | 51 |
hemopoietic organ | 1.64e-07 | 29 |
immune organ | 1.64e-07 | 29 |
endoderm-derived structure | 2.88e-07 | 118 |
endoderm | 2.88e-07 | 118 |
presumptive endoderm | 2.88e-07 | 118 |
pharynx | 4.61e-07 | 24 |
upper respiratory tract | 4.61e-07 | 24 |
chordate pharynx | 4.61e-07 | 24 |
pharyngeal arch system | 4.61e-07 | 24 |
pharyngeal region of foregut | 4.61e-07 | 24 |
connective tissue | 5.82e-07 | 46 |
subdivision of digestive tract | 6.33e-07 | 114 |
digestive system | 6.95e-07 | 116 |
digestive tract | 6.95e-07 | 116 |
primitive gut | 6.95e-07 | 116 |
gland of gut | 7.41e-07 | 24 |