FFCP PHASE1:Mm9::chr18:82754540..82754546,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr18:82754540..82754546,+ to FFCP PHASE1:Mm9::chr18:82754540..82754546,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=304 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:82754540..82754546,+ | |||
|description=CAGE_peak_at_chr18:82754540..82754546,+ | |||
|id=chr18:82754540..82754546,+ | |||
|ontology_enrichment_celltype=CL:0002614!2.95e-11!3;CL:0000630!1.55e-09!3;CL:0000221!1.33e-08!44;CL:0000133!1.33e-08!44;CL:0000117!2.02e-08!23;CL:0000337!2.02e-08!23;CL:0002611!3.56e-08!2;CL:0002319!2.05e-07!43;CL:0000325!7.34e-07!2;CL:0000217!7.34e-07!2;CL:0000328!7.34e-07!2;CL:0002573!7.34e-07!2;CL:0002376!7.34e-07!2;CL:0000218!7.34e-07!2;CL:0000692!7.34e-07!2;CL:0002377!7.34e-07!2;CL:0002375!7.34e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002611,1.09e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.32e-22!75;UBERON:0001016!8.32e-22!75;UBERON:0002298!1.56e-20!6;UBERON:0001049!2.79e-20!52;UBERON:0005068!2.79e-20!52;UBERON:0006241!2.79e-20!52;UBERON:0007135!2.79e-20!52;UBERON:0001017!1.17e-18!73;UBERON:0005743!1.17e-18!73;UBERON:0004121!5.65e-18!102;UBERON:0000924!5.65e-18!102;UBERON:0006601!5.65e-18!102;UBERON:0002616!1.03e-16!49;UBERON:0000955!2.59e-16!50;UBERON:0006238!2.59e-16!50;UBERON:0000033!1.28e-15!63;UBERON:0002346!1.60e-15!71;UBERON:0003075!1.60e-15!71;UBERON:0007284!1.60e-15!71;UBERON:0002950!6.25e-14!4;UBERON:0001891!6.25e-14!4;UBERON:0009616!6.25e-14!4;UBERON:0003076!1.17e-13!12;UBERON:0003057!1.17e-13!12;UBERON:0002020!3.31e-12!34;UBERON:0002038!2.95e-11!3;UBERON:0002308!2.95e-11!3;UBERON:0009663!2.95e-11!3;UBERON:0009661!2.95e-11!3;UBERON:0006331!2.95e-11!3;UBERON:0000125!2.95e-11!3;UBERON:0007811!1.96e-10!86;UBERON:0003080!5.98e-10!40;UBERON:0002240!1.15e-09!6;UBERON:0005174!1.15e-09!6;UBERON:0001137!1.15e-09!6;UBERON:0000153!3.17e-09!94;UBERON:0003056!3.90e-09!49;UBERON:0002780!1.30e-08!39;UBERON:0001890!1.30e-08!39;UBERON:0006240!1.30e-08!39;UBERON:0001896!3.04e-08!2;UBERON:0005290!3.04e-08!2;UBERON:0010096!3.04e-08!2;UBERON:0002256!3.56e-08!2;UBERON:0002791!4.84e-08!29;UBERON:0003528!4.84e-08!29;UBERON:0001893!4.84e-08!29;UBERON:0004111!2.42e-07!122;UBERON:0002420!2.55e-07!8;UBERON:0007245!2.55e-07!8;UBERON:0010009!2.55e-07!8;UBERON:0010011!2.55e-07!8;UBERON:0000454!2.55e-07!8;UBERON:0000025!3.52e-07!114;UBERON:0001948!8.99e-07!5;UBERON:0002315!8.99e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.55e-29,2;UBERON:0002298,2.55e-29,2;UBERON:0005290,2.55e-29,2;UBERON:0010096,2.55e-29,2;UBERON:0003076,6.55e-20,12;UBERON:0003057,6.55e-20,12;UBERON:0002240,6.82e-11,6;UBERON:0005174,6.82e-11,6;UBERON:0001137,6.82e-11,6;UBERON:0004733,1.66e-10,6;UBERON:0004732,1.66e-10,6;UBERON:0002028,1.66e-10,6;UBERON:0007277,1.66e-10,6;UBERON:0001049,1.77e-10,52;UBERON:0005068,1.77e-10,52;UBERON:0006241,1.77e-10,52;UBERON:0007135,1.77e-10,52;UBERON:0002256,1.09e-08,2;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0002420,2.89e-08,8;UBERON:0007245,2.89e-08,8;UBERON:0010009,2.89e-08,8;UBERON:0010011,2.89e-08,8;UBERON:0000454,2.89e-08,8;UBERON:0010371,1.48e-07,73;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75;UBERON:0000073,4.03e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.571301968807607,1.76694832761291,0,0,0,0,0.383062014255563,0.307213066512487,0,0,0,0.558365998002762,1.68828783009504,0.61119299110724,0,0.284743361598206,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.149790639404823,1.37250180845588,0,0.173824320192276,0.511430914660661,0.62336413367868,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.93360966433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.571301968807607,1.76694832761291,0,0,0,0,0.383062014255563,0.307213066512487,0,0,0,0.558365998002762,1.68828783009504,0.61119299110724,0,0.284743361598206,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.149790639404823,1.37250180845588,0,0.173824320192276,0.511430914660661,0.62336413367868,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.93360966433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:82754540..82754546,+ | |||
}} | }} |
Latest revision as of 04:54, 6 August 2015
Short description: | p@chr18:82754540..82754546, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:82754540..82754546, + |
Coexpression cluster: | MCL_coexpression_mm9:304 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 1.09e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 2.55e-29 | 2 |
brainstem | 2.55e-29 | 2 |
myelencephalon | 2.55e-29 | 2 |
future myelencephalon | 2.55e-29 | 2 |
posterior neural tube | 6.55e-20 | 12 |
chordal neural plate | 6.55e-20 | 12 |
spinal cord | 6.82e-11 | 6 |
dorsal region element | 6.82e-11 | 6 |
dorsum | 6.82e-11 | 6 |
segmental subdivision of hindbrain | 1.66e-10 | 6 |
segmental subdivision of nervous system | 1.66e-10 | 6 |
hindbrain | 1.66e-10 | 6 |
presumptive hindbrain | 1.66e-10 | 6 |
neural tube | 1.77e-10 | 52 |
neural rod | 1.77e-10 | 52 |
future spinal cord | 1.77e-10 | 52 |
neural keel | 1.77e-10 | 52 |
dorsal horn of spinal cord | 1.09e-08 | 2 |
neurectoderm | 1.41e-08 | 64 |
neural plate | 1.41e-08 | 64 |
presumptive neural plate | 1.41e-08 | 64 |
basal ganglion | 2.89e-08 | 8 |
nuclear complex of neuraxis | 2.89e-08 | 8 |
aggregate regional part of brain | 2.89e-08 | 8 |
collection of basal ganglia | 2.89e-08 | 8 |
cerebral subcortex | 2.89e-08 | 8 |
ecto-epithelium | 1.48e-07 | 73 |
central nervous system | 1.48e-07 | 73 |
nervous system | 2.31e-07 | 75 |
regional part of nervous system | 4.03e-07 | 54 |