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FFCP PHASE1:Mm9::chr16:31428843..31428848,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr16:31428843..31428848,+
|DHSsupport=NA
|short_description=p6@Bdh1
|DPIdataset=NA
|description=CAGE_peak_6_at_Bdh1_5end
|association_with_transcript=4bp_to_NM_001122683,uc007yxj.2,uc007yxk.2_5end
|EntrezGene=71911
|EntrezGene=71911
|HGNC=
|HGNC=
|MCL_coexpression_id=12
|TSSclassifier=NA
|UniProt=Q80XN0
|UniProt=Q80XN0
|association_with_transcript=4bp_to_NM_001122683,uc007yxj.2,uc007yxk.2_5end
|cluster_id=chr16:31428843..31428848,+
|description=CAGE_peak_6_at_Bdh1_5end
|id=chr16:31428843..31428848,+
|ontology_enrichment_celltype=CL:0002563!6.24e-07!9;CL:0002251!6.24e-07!9
|ontology_enrichment_celltype_v019_2=CL:0002563,3.14e-12,9;CL:0002251,3.14e-12,9;CL:0000239,3.02e-09,6;CL:0000677,3.02e-09,6;CL:0000584,3.02e-09,6;CL:0000075,9.32e-08,7
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!7.90e-16!52;UBERON:0005068!7.90e-16!52;UBERON:0006241!7.90e-16!52;UBERON:0007135!7.90e-16!52;UBERON:0002020!7.28e-15!34;UBERON:0001017!6.36e-14!73;UBERON:0005743!6.36e-14!73;UBERON:0000073!1.57e-13!75;UBERON:0001016!1.57e-13!75;UBERON:0000033!5.24e-13!63;UBERON:0000955!6.37e-13!50;UBERON:0006238!6.37e-13!50;UBERON:0002616!1.42e-12!49;UBERON:0002791!3.10e-12!29;UBERON:0003528!3.10e-12!29;UBERON:0001893!3.10e-12!29;UBERON:0002346!1.25e-11!71;UBERON:0003075!1.25e-11!71;UBERON:0007284!1.25e-11!71;UBERON:0004121!2.27e-11!102;UBERON:0000924!2.27e-11!102;UBERON:0006601!2.27e-11!102;UBERON:0000160!3.56e-11!43;UBERON:0003080!4.88e-10!40;UBERON:0002780!1.26e-09!39;UBERON:0001890!1.26e-09!39;UBERON:0006240!1.26e-09!39;UBERON:0000956!2.04e-09!21;UBERON:0001869!2.04e-09!21;UBERON:0000203!2.04e-09!21;UBERON:0003056!2.64e-09!49;UBERON:0005409!3.63e-09!59;UBERON:0000064!1.41e-08!99;UBERON:0000344!4.41e-08!15;UBERON:0002619!7.10e-08!17;UBERON:0001242!2.00e-07!13;UBERON:0000060!2.00e-07!13;UBERON:0001262!2.00e-07!13;UBERON:0004786!2.00e-07!13;UBERON:0003076!3.77e-07!12;UBERON:0003057!3.77e-07!12;UBERON:0003350!6.24e-07!9;UBERON:0004808!6.24e-07!9;UBERON:0001277!6.24e-07!9;UBERON:0007811!8.74e-07!86;UBERON:0002021!9.25e-07!10;UBERON:0000411!9.25e-07!10;UBERON:0001950!9.25e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.91e-16,52;UBERON:0005068,1.91e-16,52;UBERON:0006241,1.91e-16,52;UBERON:0007135,1.91e-16,52;UBERON:0002020,4.22e-15,34;UBERON:0000073,2.96e-14,54;UBERON:0002346,6.73e-14,64;UBERON:0003075,6.73e-14,64;UBERON:0007284,6.73e-14,64;UBERON:0000160,4.14e-13,31;UBERON:0002616,1.69e-12,46;UBERON:0003350,3.14e-12,9;UBERON:0004808,3.14e-12,9;UBERON:0001277,3.14e-12,9;UBERON:0010371,3.92e-12,73;UBERON:0001017,4.42e-12,73;UBERON:0000955,4.44e-12,47;UBERON:0006238,4.44e-12,47;UBERON:0003528,7.64e-12,29;UBERON:0002791,7.64e-12,29;UBERON:0001893,7.64e-12,29;UBERON:0001016,1.64e-11,75;UBERON:0000956,4.58e-11,21;UBERON:0001869,4.58e-11,21;UBERON:0000203,4.58e-11,21;UBERON:0004121,2.85e-10,95;UBERON:0000924,2.85e-10,95;UBERON:0006601,2.85e-10,95;UBERON:0011216,3.48e-10,194;UBERON:0000485,1.37e-09,11;UBERON:0005409,1.75e-09,47;UBERON:0003076,2.06e-09,12;UBERON:0003057,2.06e-09,12;UBERON:0002619,3.20e-09,17;UBERON:0003080,3.80e-09,40;UBERON:0002780,1.62e-08,39;UBERON:0001890,1.62e-08,39;UBERON:0006240,1.62e-08,39;UBERON:0003056,2.97e-08,49;UBERON:0001242,8.93e-08,13;UBERON:0001262,8.93e-08,13;UBERON:0004786,8.93e-08,13;UBERON:0000344,9.35e-08,15;UBERON:0010314,1.10e-07,92;UBERON:0002021,5.61e-07,10;UBERON:0000411,5.61e-07,10;UBERON:0001950,5.61e-07,10
|phase1_expression=0.320297694209588,4.88565570695105,3.18499467572675,2.72217790176147,2.50447864973174,1.34303417529512,1.86890112476421,0,0.140788722151667,0.468129052643987,0.171217968225505,0.0797721589953364,0,0.174840804837995,0,0,0,0,0.137114433605739,0.42438965179803,0.425216450755349,0.198581902401771,0.261199789138935,1.11994695955385,0.91763712426868,2.29692785646008,2.58457197695445,1.939241094173,0.950117097281869,0.252030129759931,0.665191531965914,0,0,0,1.1554064790051,1.49611180822643,2.24586291888606,0,0,0,0,0,0,0.125896817975577,0,0,0.782391344348039,1.96222640742402,1.09843091367236,1.1665793944457,1.67983705950435,0,0,0,0.336093799142464,0,0,0,1.01158230429799,0,0.633831403506179,1.0165335962074,0,0,0,0,0.898800331555214,4.2264013585371,1.34796496001021,1.89008313664367,1.05162480675691,0.856952953211411,2.20868540951614,0.61245399607477,1.15014565221884,0,0,0.766124028511126,0.614426133024974,0.659431438650969,0.731901148819277,1.04182674111352,0.837548997004143,2.25105044012672,0.61119299110724,1.76777151284201,1.70846016958924,1.4911955666024,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0.884610551949874,0,0,0,0,1.17112318804619,1.04723353406728,1.53274233125155,0,0,0,1.19832511523858,1.83000241127451,1.00523481690292,0.521472960576829,0.255715457330331,1.45451631191692,0.811206315338788,0,0.124406970610093,0.252722758433675,1.47309299120532,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0.2562274405697,0.281105173679186,1.55222022443409,0.215567992932842,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0,0.219550115291051,0.536825675041487,1.26173969138476,1.3377599609307,0.991256348951394,1.58670339998127,0,0.232236671860439,0.515469845288373,1.4117846723634,1.77902435075896,1.71203063501303,0.949058123089023,1.31759163779209,2.26201687920243,1.79060824837036,1.75467678407208,0.898819408654221,1.29682829924817,1.1948476395262,0,0,0,0.407302655690628,0.193952487167626,0.210407459670956,0.316182685621286,0.295220295959204,1.41298855057237,0.493588655687202,0,0,0.196558995113203,0,0,0.241177159752417,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,1.96705709207614,0,1.44495530989013,2.10981035865966,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0,0.963963949265421,0,0,0,0,0,0.242780636154981,0.604647113929502,0.377210159511796,0.295301892880773,0.307435147943927,0.775284879504663,0.727067458955011,1.78248689192361,0.316036757935816,0,0,0.340439605753788,0,0.129358683782755,0,0,0.356737635204141,0.164549020602121,0,0.23467170806371,0,0,0,0.322928853391811,0.241251699712623,0.119372344003136,0.328281799490123,0.582961673259701,1.48340241608408,0,0,0.185194527369712,0,0.27338845544205,0,0,0,0.138199973804424,0,0,0,0.540026704109006,1.04544148007234,0.436725127492355,0.809186078308924,0.247960367176008,1.04702376793612,2.59229946583586,0.621339313086926,0,0.299033092087958,0,0.194451188344048,0,0,0,0.13020438484395,0.524296722128554,0,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,1.36038230169127,0.221985953374065,0.0897138566094757,0.167884616364078,0,0,0,1.50057865355346,0,1.12950368523413,4.14292712856459,4.58316410751517,2.92150409984269,2.74033007908257,0.755393897389701,2.70009000092722,0.900642406448441,0.906284817968409,2.07104124700728,0.207574695168353,0.399024873401031,0,0.243106717068294,0.209613162627982,0.735374033800057,0,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.468207537349412,0.320125762024346,0.0574354689556133,1.42888107384922,0.695305955669133,0,0,0,0,0.70990322463735,0,0.436039249896986,0.564656282491984,0.423073039458382,0.182927972872773,0.526139422875686,0.271608227691724,1.12228454331548,0.355905054372522,0.29551344712669,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0,0,0,0,0
|phase1_expression=0.320297694209588,4.88565570695105,3.18499467572675,2.72217790176147,2.50447864973174,1.34303417529512,1.86890112476421,0,0.140788722151667,0.468129052643987,0.171217968225505,0.0797721589953364,0,0.174840804837995,0,0,0,0,0.137114433605739,0.42438965179803,0.425216450755349,0.198581902401771,0.261199789138935,1.11994695955385,0.91763712426868,2.29692785646008,2.58457197695445,1.939241094173,0.950117097281869,0.252030129759931,0.665191531965914,0,0,0,1.1554064790051,1.49611180822643,2.24586291888606,0,0,0,0,0,0,0.125896817975577,0,0,0.782391344348039,1.96222640742402,1.09843091367236,1.1665793944457,1.67983705950435,0,0,0,0.336093799142464,0,0,0,1.01158230429799,0,0.633831403506179,1.0165335962074,0,0,0,0,0.898800331555214,4.2264013585371,1.34796496001021,1.89008313664367,1.05162480675691,0.856952953211411,2.20868540951614,0.61245399607477,1.15014565221884,0,0,0.766124028511126,0.614426133024974,0.659431438650969,0.731901148819277,1.04182674111352,0.837548997004143,2.25105044012672,0.61119299110724,1.76777151284201,1.70846016958924,1.4911955666024,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0.884610551949874,0,0,0,0,1.17112318804619,1.04723353406728,1.53274233125155,0,0,0,1.19832511523858,1.83000241127451,1.00523481690292,0.521472960576829,0.255715457330331,1.45451631191692,0.811206315338788,0,0.124406970610093,0.252722758433675,1.47309299120532,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0.2562274405697,0.281105173679186,1.55222022443409,0.215567992932842,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0,0.219550115291051,0.536825675041487,1.26173969138476,1.3377599609307,0.991256348951394,1.58670339998127,0,0.232236671860439,0.515469845288373,1.4117846723634,1.77902435075896,1.71203063501303,0.949058123089023,1.31759163779209,2.26201687920243,1.79060824837036,1.75467678407208,0.898819408654221,1.29682829924817,1.1948476395262,0,0,0,0.407302655690628,0.193952487167626,0.210407459670956,0.316182685621286,0.295220295959204,1.41298855057237,0.493588655687202,0,0,0.196558995113203,0,0,0.241177159752417,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,1.96705709207614,0,1.44495530989013,2.10981035865966,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0,0.963963949265421,0,0,0,0,0,0.242780636154981,0.604647113929502,0.377210159511796,0.295301892880773,0.307435147943927,0.775284879504663,0.727067458955011,1.78248689192361,0.316036757935816,0,0,0.340439605753788,0,0.129358683782755,0,0,0.356737635204141,0.164549020602121,0,0.23467170806371,0,0,0,0.322928853391811,0.241251699712623,0.119372344003136,0.328281799490123,0.582961673259701,1.48340241608408,0,0,0.185194527369712,0,0.27338845544205,0,0,0,0.138199973804424,0,0,0,0.540026704109006,1.04544148007234,0.436725127492355,0.809186078308924,0.247960367176008,1.04702376793612,2.59229946583586,0.621339313086926,0,0.299033092087958,0,0.194451188344048,0,0,0,0.13020438484395,0.524296722128554,0,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,1.36038230169127,0.221985953374065,0.0897138566094757,0.167884616364078,0,0,0,1.50057865355346,0,1.12950368523413,4.14292712856459,4.58316410751517,2.92150409984269,2.74033007908257,0.755393897389701,2.70009000092722,0.900642406448441,0.906284817968409,2.07104124700728,0.207574695168353,0.399024873401031,0,0.243106717068294,0.209613162627982,0.735374033800057,0,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.468207537349412,0.320125762024346,0.0574354689556133,1.42888107384922,0.695305955669133,0,0,0,0,0.70990322463735,0,0.436039249896986,0.564656282491984,0.423073039458382,0.182927972872773,0.526139422875686,0.271608227691724,1.12228454331548,0.355905054372522,0.29551344712669,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0,0,0,0,0
|short_description=p6@Bdh1
}}
}}

Latest revision as of 21:01, 1 October 2015

Short description:p6@Bdh1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Bdh1_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: 4bp_to_NM_001122683, uc007yxj.2, uc007yxk.2_5end
EntrezGene:Bdh1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Bdh1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A32.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I12.59
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neural tube1.91e-1652
neural rod1.91e-1652
future spinal cord1.91e-1652
neural keel1.91e-1652
gray matter4.22e-1534
regional part of nervous system2.96e-1454
neurectoderm6.73e-1464
neural plate6.73e-1464
presumptive neural plate6.73e-1464
intestine4.14e-1331
regional part of brain1.69e-1246
epithelium of mucosa3.14e-129
gastrointestinal system epithelium3.14e-129
intestinal epithelium3.14e-129
ecto-epithelium3.92e-1273
central nervous system4.42e-1273
brain4.44e-1247
future brain4.44e-1247
brain grey matter7.64e-1229
regional part of telencephalon7.64e-1229
telencephalon7.64e-1229
nervous system1.64e-1175
cerebral cortex4.58e-1121
cerebral hemisphere4.58e-1121
pallium4.58e-1121
ectoderm-derived structure2.85e-1095
ectoderm2.85e-1095
presumptive ectoderm2.85e-1095
organ system subdivision3.48e-10194
simple columnar epithelium1.37e-0911
gastrointestinal system1.75e-0947
posterior neural tube2.06e-0912
chordal neural plate2.06e-0912
regional part of cerebral cortex3.20e-0917
anterior neural tube3.80e-0940
regional part of forebrain1.62e-0839
forebrain1.62e-0839
future forebrain1.62e-0839
pre-chordal neural plate2.97e-0849
intestinal mucosa8.93e-0813
wall of intestine8.93e-0813
gastrointestinal system mucosa8.93e-0813
mucosa9.35e-0815
structure with developmental contribution from neural crest1.10e-0792
occipital lobe5.61e-0710
visual cortex5.61e-0710
neocortex5.61e-0710
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