FFCP PHASE1:Mm9::chr16:20619899..20619944,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr16:20619899..20619944,- to FFCP PHASE1:Mm9::chr16:20619899..20619944,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=596 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:20619899..20619944,- | |||
|description=CAGE_peak_at_chr16:20619899..20619944,- | |||
|id=chr16:20619899..20619944,- | |||
|ontology_enrichment_celltype=CL:0000117!2.63e-17!23;CL:0000337!2.63e-17!23;CL:0000221!6.02e-14!44;CL:0000133!6.02e-14!44;CL:0002319!7.87e-14!43;CL:0000540!8.54e-12!33;CL:0000047!8.54e-12!33;CL:0000031!8.54e-12!33;CL:0000404!8.54e-12!33;CL:0000055!6.34e-11!50;CL:0000393!2.77e-09!39;CL:0000211!2.77e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.47e-24,23;CL:0000337,3.47e-24,23;CL:0000540,1.70e-15,33;CL:0000047,1.70e-15,33;CL:0000031,1.70e-15,33;CL:0000404,1.70e-15,33;CL:0002319,4.73e-14,43;CL:0000221,1.28e-13,44;CL:0000133,1.28e-13,44;CL:0000393,1.95e-12,39;CL:0000211,1.95e-12,39;CL:0002612,5.95e-08,3;CL:0002610,1.46e-07,3;CL:0000120,6.79e-07,3;CL:0002321,8.10e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.35e-32!73;UBERON:0005743!7.35e-32!73;UBERON:0000073!4.44e-31!75;UBERON:0001016!4.44e-31!75;UBERON:0002346!1.98e-30!71;UBERON:0003075!1.98e-30!71;UBERON:0007284!1.98e-30!71;UBERON:0001049!2.42e-30!52;UBERON:0005068!2.42e-30!52;UBERON:0006241!2.42e-30!52;UBERON:0007135!2.42e-30!52;UBERON:0004121!1.15e-29!102;UBERON:0000924!1.15e-29!102;UBERON:0006601!1.15e-29!102;UBERON:0000955!4.19e-28!50;UBERON:0006238!4.19e-28!50;UBERON:0002616!1.89e-27!49;UBERON:0000033!1.30e-26!63;UBERON:0002020!1.99e-21!34;UBERON:0003080!4.23e-20!40;UBERON:0002780!2.44e-19!39;UBERON:0001890!2.44e-19!39;UBERON:0006240!2.44e-19!39;UBERON:0003056!1.08e-18!49;UBERON:0002791!6.11e-17!29;UBERON:0003528!6.11e-17!29;UBERON:0001893!6.11e-17!29;UBERON:0007811!2.19e-16!86;UBERON:0000153!2.31e-14!94;UBERON:0000956!1.29e-11!21;UBERON:0001869!1.29e-11!21;UBERON:0000203!1.29e-11!21;UBERON:0003076!7.16e-11!12;UBERON:0003057!7.16e-11!12;UBERON:0002619!6.48e-10!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.22e-40,54;UBERON:0001017,1.88e-38,73;UBERON:0001016,3.43e-37,75;UBERON:0001049,9.08e-37,52;UBERON:0005068,9.08e-37,52;UBERON:0006241,9.08e-37,52;UBERON:0007135,9.08e-37,52;UBERON:0002346,2.26e-28,64;UBERON:0003075,2.26e-28,64;UBERON:0007284,2.26e-28,64;UBERON:0004121,1.71e-27,95;UBERON:0000924,1.71e-27,95;UBERON:0006601,1.71e-27,95;UBERON:0002616,5.92e-26,46;UBERON:0000955,2.94e-25,47;UBERON:0006238,2.94e-25,47;UBERON:0002020,1.57e-24,34;UBERON:0010371,6.90e-24,73;UBERON:0003076,2.83e-21,12;UBERON:0003057,2.83e-21,12;UBERON:0003080,8.17e-19,40;UBERON:0002780,1.93e-17,39;UBERON:0001890,1.93e-17,39;UBERON:0006240,1.93e-17,39;UBERON:0010314,2.64e-17,92;UBERON:0003528,6.31e-16,29;UBERON:0002791,6.31e-16,29;UBERON:0001893,6.31e-16,29;UBERON:0003056,2.32e-14,49;UBERON:0002240,7.39e-14,6;UBERON:0005174,7.39e-14,6;UBERON:0001137,7.39e-14,6;UBERON:0000025,1.95e-12,114;UBERON:0001948,4.95e-12,5;UBERON:0002315,4.95e-12,5;UBERON:0004111,4.17e-11,122;UBERON:0002619,1.13e-09,17;UBERON:0004733,3.49e-09,6;UBERON:0004732,3.49e-09,6;UBERON:0002028,3.49e-09,6;UBERON:0007277,3.49e-09,6;UBERON:0000956,4.18e-09,21;UBERON:0001869,4.18e-09,21;UBERON:0000203,4.18e-09,21;UBERON:0011216,7.43e-09,194;UBERON:0002420,9.20e-09,8;UBERON:0007245,9.20e-09,8;UBERON:0010009,9.20e-09,8;UBERON:0010011,9.20e-09,8;UBERON:0000454,9.20e-09,8;UBERON:0002021,1.30e-08,10;UBERON:0000411,1.30e-08,10;UBERON:0001950,1.30e-08,10;UBERON:0002257,5.95e-08,3;UBERON:0004684,1.46e-07,3;UBERON:0002275,1.46e-07,3 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506884656097573,0,3.9119567217402,0.436050312760893,0.439372365468944,0.777719596297134,0.139986421625363,0,0,0,0,0,0,0,3.43937983461316,1.05798195854407,2.53532561402472,0.338844532069132,0,0,0,0,0.898800331555214,1.53687322128622,0.725827286159344,0.135005938331691,0.841299845405528,4.57041575046086,2.65042249141936,2.57230678351403,0.862609239164127,1.83843757322004,5.50579404996943,2.93680877595932,1.84327839907492,2.1101806036831,1.37231465403614,0.52091337055676,2.51264699101243,0.56276261003168,1.83357897332172,5.89257170947335,4.6982654663704,3.16879057903011,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,1.06001872353102,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.346970653532272,0.304465478312141,0.691846491768175,0.301445281105245,0.470354828542819,0.251333182659351,0,0,0,0,0,0,0,1.75668478206928,14.6612694769419,0,0,0,0,1.79748767285787,1.37250180845588,2.26177833803156,1.56441888173049,1.79000820131231,2.90903262383384,1.29793010454206,0.101839363850316,0,0,0,0.130120442962704,0,0,0.150704817835715,0.748401490664606,0.12811372028485,0.0937017245597288,0.258703370739016,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,1.13195073617213,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,1.60550589987792,2.57865710502847,0.491804836130026,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0.292255857911312,0,0.963963949265421,0.283880170416537,0,0,0,0,0.485561272309963,0,0,0,0,0,0.363533729477506,0,0,1.05418608574999,0,0.680879211507576,0.18006109403131,0.258717367565509,0,0,1.07021290561242,0.658196082408484,1.522324745573,0.23467170806371,0,0,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0.129614973291793,0.621339313086926,0,0.299033092087958,0,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0.564751842617067,1.84130094602871,1.71868654031819,1.3748254587495,1.37016503954128,2.2661816921691,1.35004500046361,0.45032120322422,0,1.03552062350364,0,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0,0,0,0.0936415074698824,0,0.17230640686684,0.476293691283074,0,0.38581844092741,0,0,0.342869252385415,0.532427418478012,0,0.145346416632329,0,0,0.182927972872773,0.526139422875686,0,0.561142271657738,0,0.197008964751127,0,0.154936841185966,0.578719832943424,0.749431733813838,0,1.28922632428979,0.956441660344217,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506884656097573,0,3.9119567217402,0.436050312760893,0.439372365468944,0.777719596297134,0.139986421625363,0,0,0,0,0,0,0,3.43937983461316,1.05798195854407,2.53532561402472,0.338844532069132,0,0,0,0,0.898800331555214,1.53687322128622,0.725827286159344,0.135005938331691,0.841299845405528,4.57041575046086,2.65042249141936,2.57230678351403,0.862609239164127,1.83843757322004,5.50579404996943,2.93680877595932,1.84327839907492,2.1101806036831,1.37231465403614,0.52091337055676,2.51264699101243,0.56276261003168,1.83357897332172,5.89257170947335,4.6982654663704,3.16879057903011,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,1.06001872353102,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.346970653532272,0.304465478312141,0.691846491768175,0.301445281105245,0.470354828542819,0.251333182659351,0,0,0,0,0,0,0,1.75668478206928,14.6612694769419,0,0,0,0,1.79748767285787,1.37250180845588,2.26177833803156,1.56441888173049,1.79000820131231,2.90903262383384,1.29793010454206,0.101839363850316,0,0,0,0.130120442962704,0,0,0.150704817835715,0.748401490664606,0.12811372028485,0.0937017245597288,0.258703370739016,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,1.13195073617213,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0.493588655687202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,1.60550589987792,2.57865710502847,0.491804836130026,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0.292255857911312,0,0.963963949265421,0.283880170416537,0,0,0,0,0.485561272309963,0,0,0,0,0,0.363533729477506,0,0,1.05418608574999,0,0.680879211507576,0.18006109403131,0.258717367565509,0,0,1.07021290561242,0.658196082408484,1.522324745573,0.23467170806371,0,0,0,0,0,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0,0,0.129614973291793,0.621339313086926,0,0.299033092087958,0,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0.564751842617067,1.84130094602871,1.71868654031819,1.3748254587495,1.37016503954128,2.2661816921691,1.35004500046361,0.45032120322422,0,1.03552062350364,0,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0,0,0,0.0936415074698824,0,0.17230640686684,0.476293691283074,0,0.38581844092741,0,0,0.342869252385415,0.532427418478012,0,0.145346416632329,0,0,0.182927972872773,0.526139422875686,0,0.561142271657738,0,0.197008964751127,0,0.154936841185966,0.578719832943424,0.749431733813838,0,1.28922632428979,0.956441660344217,0.220591419119515,0 | ||
|short_description=p@chr16:20619899..20619944,- | |||
}} | }} |
Latest revision as of 04:03, 6 August 2015
Short description: | p@chr16:20619899..20619944, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:20619899..20619944, - |
Coexpression cluster: | MCL_coexpression_mm9:596 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.47e-24 | 23 |
neuroblast (sensu Vertebrata) | 3.47e-24 | 23 |
neuron | 1.70e-15 | 33 |
neuronal stem cell | 1.70e-15 | 33 |
neuroblast | 1.70e-15 | 33 |
electrically signaling cell | 1.70e-15 | 33 |
neural cell | 4.73e-14 | 43 |
ectodermal cell | 1.28e-13 | 44 |
neurectodermal cell | 1.28e-13 | 44 |
electrically responsive cell | 1.95e-12 | 39 |
electrically active cell | 1.95e-12 | 39 |
neuron of the ventral spinal cord | 5.95e-08 | 3 |
raphe nuclei neuron | 1.46e-07 | 3 |
granule cell | 6.79e-07 | 3 |
embryonic cell | 8.10e-07 | 70 |