FFCP PHASE1:Mm9::chr15:101004527..101004579,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr15:101004527..101004579,+ to FFCP PHASE1:Mm9::chr15:101004527..101004579,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=11479 | |EntrezGene=11479 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q61271,Q3TZF1 | |UniProt=Q61271,Q3TZF1 | ||
|association_with_transcript=0bp_to_ENSMUST00000000544,NM_007395,uc007xsr.1_5end | |||
|cluster_id=chr15:101004527..101004579,+ | |||
|description=CAGE_peak_1_at_Acvr1b_5end | |||
|id=chr15:101004527..101004579,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.34e-13!23;CL:0000337!6.34e-13!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.34e-13,23;CL:0000337,6.34e-13,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!8.28e-18!34;UBERON:0001049!1.15e-17!52;UBERON:0005068!1.15e-17!52;UBERON:0006241!1.15e-17!52;UBERON:0007135!1.15e-17!52;UBERON:0000955!6.30e-17!50;UBERON:0006238!6.30e-17!50;UBERON:0002616!1.60e-16!49;UBERON:0000033!2.14e-15!63;UBERON:0002791!4.34e-15!29;UBERON:0003528!4.34e-15!29;UBERON:0001893!4.34e-15!29;UBERON:0003080!1.19e-14!40;UBERON:0002780!2.42e-14!39;UBERON:0001890!2.42e-14!39;UBERON:0006240!2.42e-14!39;UBERON:0003056!9.90e-14!49;UBERON:0001017!1.83e-12!73;UBERON:0005743!1.83e-12!73;UBERON:0000956!3.86e-11!21;UBERON:0001869!3.86e-11!21;UBERON:0000203!3.86e-11!21;UBERON:0000073!4.08e-11!75;UBERON:0001016!4.08e-11!75;UBERON:0004121!5.78e-10!102;UBERON:0000924!5.78e-10!102;UBERON:0006601!5.78e-10!102;UBERON:0002346!6.93e-10!71;UBERON:0003075!6.93e-10!71;UBERON:0007284!6.93e-10!71;UBERON:0002619!4.03e-09!17;UBERON:0000160!5.60e-09!43;UBERON:0000064!1.38e-08!99;UBERON:0002021!5.84e-08!10;UBERON:0000411!5.84e-08!10;UBERON:0001950!5.84e-08!10;UBERON:0007811!2.00e-07!86;UBERON:0000153!3.10e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.81e-19,54;UBERON:0002020,8.28e-18,34;UBERON:0001049,1.15e-17,52;UBERON:0005068,1.15e-17,52;UBERON:0006241,1.15e-17,52;UBERON:0007135,1.15e-17,52;UBERON:0010371,9.96e-16,73;UBERON:0000955,1.91e-15,47;UBERON:0006238,1.91e-15,47;UBERON:0003528,4.34e-15,29;UBERON:0002791,4.34e-15,29;UBERON:0001893,4.34e-15,29;UBERON:0002616,4.76e-15,46;UBERON:0003080,1.19e-14,40;UBERON:0002346,2.04e-14,64;UBERON:0003075,2.04e-14,64;UBERON:0007284,2.04e-14,64;UBERON:0002780,2.42e-14,39;UBERON:0001890,2.42e-14,39;UBERON:0006240,2.42e-14,39;UBERON:0003056,9.90e-14,49;UBERON:0004121,1.36e-13,95;UBERON:0000924,1.36e-13,95;UBERON:0006601,1.36e-13,95;UBERON:0001017,1.83e-12,73;UBERON:0000956,3.86e-11,21;UBERON:0001869,3.86e-11,21;UBERON:0000203,3.86e-11,21;UBERON:0001016,4.08e-11,75;UBERON:0000160,1.87e-09,31;UBERON:0002619,4.03e-09,17;UBERON:0002021,5.84e-08,10;UBERON:0000411,5.84e-08,10;UBERON:0001950,5.84e-08,10 | |||
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| ||
|short_description=p1@Acvr1b | |||
}} | }} |
Latest revision as of 12:42, 26 September 2015
Short description: | p1@Acvr1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Acvr1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000000544, NM_007395, uc007xsr.1_5end |
EntrezGene: | Acvr1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.34e-13 | 23 |
neuroblast (sensu Vertebrata) | 6.34e-13 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.81e-19 | 54 |
gray matter | 8.28e-18 | 34 |
neural tube | 1.15e-17 | 52 |
neural rod | 1.15e-17 | 52 |
future spinal cord | 1.15e-17 | 52 |
neural keel | 1.15e-17 | 52 |
ecto-epithelium | 9.96e-16 | 73 |
brain | 1.91e-15 | 47 |
future brain | 1.91e-15 | 47 |
brain grey matter | 4.34e-15 | 29 |
regional part of telencephalon | 4.34e-15 | 29 |
telencephalon | 4.34e-15 | 29 |
regional part of brain | 4.76e-15 | 46 |
anterior neural tube | 1.19e-14 | 40 |
neurectoderm | 2.04e-14 | 64 |
neural plate | 2.04e-14 | 64 |
presumptive neural plate | 2.04e-14 | 64 |
regional part of forebrain | 2.42e-14 | 39 |
forebrain | 2.42e-14 | 39 |
future forebrain | 2.42e-14 | 39 |
pre-chordal neural plate | 9.90e-14 | 49 |
ectoderm-derived structure | 1.36e-13 | 95 |
ectoderm | 1.36e-13 | 95 |
presumptive ectoderm | 1.36e-13 | 95 |
central nervous system | 1.83e-12 | 73 |
cerebral cortex | 3.86e-11 | 21 |
cerebral hemisphere | 3.86e-11 | 21 |
pallium | 3.86e-11 | 21 |
nervous system | 4.08e-11 | 75 |
intestine | 1.87e-09 | 31 |
regional part of cerebral cortex | 4.03e-09 | 17 |
occipital lobe | 5.84e-08 | 10 |
visual cortex | 5.84e-08 | 10 |
neocortex | 5.84e-08 | 10 |