FFCP PHASE1:Mm9::chr13:78339705..78339720,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr13:78339705..78339720,- to FFCP PHASE1:Mm9::chr13:78339705..78339720,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:78339705..78339720,- | |||
|description=CAGE_peak_at_chr13:78339705..78339720,- | |||
|id=chr13:78339705..78339720,- | |||
|ontology_enrichment_celltype=CL:0000221!3.52e-17!44;CL:0000133!3.52e-17!44;CL:0002319!1.77e-16!43;CL:0000540!2.78e-15!33;CL:0000047!2.78e-15!33;CL:0000031!2.78e-15!33;CL:0000404!2.78e-15!33;CL:0000055!8.87e-15!50;CL:0000393!5.28e-14!39;CL:0000211!5.28e-14!39;CL:0000117!3.31e-11!23;CL:0000337!3.31e-11!23;CL:0002321!4.89e-07!70;CL:0000220!4.89e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,8.11e-20,44;CL:0000133,8.11e-20,44;CL:0000540,2.59e-19,33;CL:0000047,2.59e-19,33;CL:0000031,2.59e-19,33;CL:0000404,2.59e-19,33;CL:0002319,9.68e-19,43;CL:0000117,7.21e-16,23;CL:0000337,7.21e-16,23;CL:0000393,4.45e-15,39;CL:0000211,4.45e-15,39;CL:0002321,9.51e-10,70;CL:0002609,6.90e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.02e-24!102;UBERON:0000924!2.02e-24!102;UBERON:0006601!2.02e-24!102;UBERON:0000073!6.43e-23!75;UBERON:0001016!6.43e-23!75;UBERON:0001017!1.76e-21!73;UBERON:0005743!1.76e-21!73;UBERON:0002346!1.59e-19!71;UBERON:0003075!1.59e-19!71;UBERON:0007284!1.59e-19!71;UBERON:0000033!1.54e-18!63;UBERON:0003056!1.27e-14!49;UBERON:0001049!1.54e-14!52;UBERON:0005068!1.54e-14!52;UBERON:0006241!1.54e-14!52;UBERON:0007135!1.54e-14!52;UBERON:0000955!2.99e-12!50;UBERON:0006238!2.99e-12!50;UBERON:0007811!1.04e-11!86;UBERON:0002616!1.06e-11!49;UBERON:0000153!1.18e-10!94;UBERON:0003080!3.98e-10!40;UBERON:0002020!6.11e-10!34;UBERON:0002780!7.49e-10!39;UBERON:0001890!7.49e-10!39;UBERON:0006240!7.49e-10!39;UBERON:0002791!2.05e-07!29;UBERON:0003528!2.05e-07!29;UBERON:0001893!2.05e-07!29;UBERON:0000020!2.90e-07!12;UBERON:0001032!2.90e-07!12;UBERON:0004456!2.90e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.07e-18,95;UBERON:0000924,1.07e-18,95;UBERON:0006601,1.07e-18,95;UBERON:0001016,2.02e-15,75;UBERON:0001017,9.80e-14,73;UBERON:0002346,9.26e-12,64;UBERON:0003075,9.26e-12,64;UBERON:0007284,9.26e-12,64;UBERON:0010371,4.07e-11,73;UBERON:0000020,3.56e-09,12;UBERON:0001032,3.56e-09,12;UBERON:0004456,3.56e-09,12;UBERON:0003056,5.09e-09,49;UBERON:0000033,2.87e-08,13;UBERON:0005085,2.87e-08,13;UBERON:0002020,3.47e-08,34;UBERON:0000970,4.97e-08,9;UBERON:0000019,4.97e-08,9;UBERON:0000047,4.97e-08,9;UBERON:0010312,4.97e-08,9;UBERON:0004088,4.97e-08,9;UBERON:0002104,4.97e-08,9;UBERON:0001456,4.97e-08,9;UBERON:0003072,4.97e-08,9;UBERON:0004128,4.97e-08,9;UBERON:0003071,4.97e-08,9;UBERON:0000073,7.57e-08,54;UBERON:0001049,1.06e-07,52;UBERON:0005068,1.06e-07,52;UBERON:0006241,1.06e-07,52;UBERON:0007135,1.06e-07,52;UBERON:0010314,1.74e-07,92 | |||
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|phase1_expression=3.68342348341026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.811015449756117,0.734187008646726,1.56478268869608,0.218025156380447,0.659058548203415,0.194429899074283,0.279972843250725,0,0,0,0,0.257259436035947,0,0,7.28339259094552,12.1667925232568,7.60597684207415,1.0165335962074,0,0,0,0,0.299600110518405,1.53687322128622,6.947204024668,6.34527910158946,4.41682418837902,1.71390590642282,2.65042249141936,7.7169203505421,5.65488279007595,11.9498442259303,0,1.0214987046815,0.614426133024974,22.1568963386726,14.1805847583735,15.6274011167028,0.558365998002762,0,0.45839474333043,1.47314292736834,3.27454865837937,2.23679334990361,5.14938114665652,5.44115232768856,1.15945795480671,0,0,0,0,0,0,0,0,0,5.49289337129054,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.445326417194474,1.21439728736295,0,0.230615497256059,0.150722640552623,0.117588707135705,0.251333182659351,0,0.144599356919912,0,0,0,0,0,1.17112318804619,1.04723353406728,0,0,0,0,0.898743836428936,0,1.13088916901578,0.521472960576829,0.511430914660661,1.24672826735736,1.46017136760982,0.509196819251581,0,0,1.05220927943237,11.7108398666433,4.13823787980251,4.86167750474443,2.56198190320716,1.36072998302656,3.45907044769094,1.87403449119458,0.517406741478031,0.215567992932842,1.13463648100692,0.351902248327898,0,0,0,0,1.39323986772945,0,0,0,0.621377317606506,0.703578179943289,0.36012412292203,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,0.420579897128254,3.08713837137853,0,0,0.639864751605702,0.696710015581316,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,1.70701110857774,1.82797620175566,0,0.814605311381257,0.969762435838129,0.140271639780637,0,0.147610147979602,0,0,0,0.333690211432188,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0,0,0,0,0,0,0,0,0.318909537314974,0,0,0,0,0,0,0,0.642202359951168,0.937693492737625,0.163934945376675,0,0.94652465824877,0.390438744296638,0.646270193198397,1.19484398976276,2.22798674082394,1.98153571552183,2.42886421004937,1.16902343164525,1.18586333383957,2.57057053137446,0,0.35613120733451,0.325773918707152,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,3.24109969256358,0.388076051348264,0.643011105094777,0.709360934569094,0.535106452806212,0.493647061806363,0.913394847343798,0.23467170806371,0,0.220528398054962,0.16488625294148,0,0,0,0,0,0.370850604021019,0,0.412773735926445,0,0,0,0,0,0,0,0,2.68885594543965,1.01659733563424,0.324016022465404,0.418176592028937,0.436725127492355,0.404593039154462,0.165306911450672,0,0,0.621339313086926,0,0.299033092087958,0,0.194451188344048,0.258319646955462,0,0,0.2604087696879,0,0,0,0.632022241256357,1.01362607645082,0.616265742988964,0.51968329191118,0.358053391334963,0,0.120195449519969,0.147689527174577,0.201932899896295,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,0,0.187682475451182,0,0,0,1.12950368523413,0.460325236507177,1.14579102687879,0.68741272937475,0,0.755393897389701,0,0.45032120322422,0.906284817968409,0.51776031175182,15.9832515279632,7.98049746802062,4.78054096111576,1.94485373654635,2.51535795153579,2.02227859295016,1.11123363900808,0.618105171716683,0.64183841918363,2.02157769411038,0.760437899670719,0.188626341386076,1.12369808963859,0.89635213366817,1.09127391015665,0.476293691283074,0.927074607558844,1.54327376370964,1.23625770240992,0.441596760403192,1.02860775715625,1.4198064492747,1.1921809497366,0.726732083161643,1.03520318456864,1.26921911837515,1.46342378298218,0.526139422875686,0.950628796921032,0.561142271657738,0.830445126869219,0.29551344712669,0.409231043169689,1.08455788830176,1.92906610981141,1.74867404556562,1.16965804222704,0.214871054048298,0.191288332068843,0.220591419119515,0 | ||
|short_description=p@chr13:78339705..78339720,- | |||
}} | }} |
Latest revision as of 08:36, 6 August 2015
Short description: | p@chr13:78339705..78339720, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:78339705..78339720, - |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 8.11e-20 | 44 |
neurectodermal cell | 8.11e-20 | 44 |
neuron | 2.59e-19 | 33 |
neuronal stem cell | 2.59e-19 | 33 |
neuroblast | 2.59e-19 | 33 |
electrically signaling cell | 2.59e-19 | 33 |
neural cell | 9.68e-19 | 43 |
CNS neuron (sensu Vertebrata) | 7.21e-16 | 23 |
neuroblast (sensu Vertebrata) | 7.21e-16 | 23 |
electrically responsive cell | 4.45e-15 | 39 |
electrically active cell | 4.45e-15 | 39 |
embryonic cell | 9.51e-10 | 70 |
neuron of cerebral cortex | 6.90e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.07e-18 | 95 |
ectoderm | 1.07e-18 | 95 |
presumptive ectoderm | 1.07e-18 | 95 |
nervous system | 2.02e-15 | 75 |
central nervous system | 9.80e-14 | 73 |
neurectoderm | 9.26e-12 | 64 |
neural plate | 9.26e-12 | 64 |
presumptive neural plate | 9.26e-12 | 64 |
ecto-epithelium | 4.07e-11 | 73 |
sense organ | 3.56e-09 | 12 |
sensory system | 3.56e-09 | 12 |
entire sense organ system | 3.56e-09 | 12 |
pre-chordal neural plate | 5.09e-09 | 49 |
head | 2.87e-08 | 13 |
ectodermal placode | 2.87e-08 | 13 |
gray matter | 3.47e-08 | 34 |
eye | 4.97e-08 | 9 |
camera-type eye | 4.97e-08 | 9 |
simple eye | 4.97e-08 | 9 |
immature eye | 4.97e-08 | 9 |
ocular region | 4.97e-08 | 9 |
visual system | 4.97e-08 | 9 |
face | 4.97e-08 | 9 |
optic cup | 4.97e-08 | 9 |
optic vesicle | 4.97e-08 | 9 |
eye primordium | 4.97e-08 | 9 |
regional part of nervous system | 7.57e-08 | 54 |
neural tube | 1.06e-07 | 52 |
neural rod | 1.06e-07 | 52 |
future spinal cord | 1.06e-07 | 52 |
neural keel | 1.06e-07 | 52 |
structure with developmental contribution from neural crest | 1.74e-07 | 92 |