FFCP PHASE1:Mm9::chr13:40826236..40826248,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=21418 | |EntrezGene=21418 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1645 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BPN4 | |UniProt=Q8BPN4 | ||
|association_with_transcript=-424bp_to_NM_001122948,uc007qee.2_5end | |||
|cluster_id=chr13:40826236..40826248,- | |||
|description=CAGE_peak_8_at_Tfap2a_5end | |||
|id=chr13:40826236..40826248,- | |||
|ontology_enrichment_celltype=CL:0000107!3.01e-10!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,9.37e-21,9;CL:0002319,5.82e-08,43;CL:0000217,8.61e-08,2;CL:0000328,8.61e-08,2;CL:0002573,8.61e-08,2;CL:0002376,8.61e-08,2;CL:0000218,8.61e-08,2;CL:0000692,8.61e-08,2;CL:0002377,8.61e-08,2;CL:0002375,8.61e-08,2;CL:0000221,9.97e-08,44;CL:0000133,9.97e-08,44;CL:0000540,2.33e-07,33;CL:0000047,2.33e-07,33;CL:0000031,2.33e-07,33;CL:0000404,2.33e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!1.76e-12!11;UBERON:0002410!3.01e-10!9;UBERON:0001444!4.00e-10!11;UBERON:0000970!8.16e-09!9;UBERON:0000019!8.16e-09!9;UBERON:0000047!8.16e-09!9;UBERON:0004088!8.16e-09!9;UBERON:0002104!8.16e-09!9;UBERON:0001456!8.16e-09!9;UBERON:0003072!8.16e-09!9;UBERON:0003071!8.16e-09!9;UBERON:0004128!8.16e-09!9;UBERON:0000020!2.06e-08!12;UBERON:0001032!2.06e-08!12;UBERON:0004456!2.06e-08!12;UBERON:0005085!1.05e-07!13;UBERON:0003102!1.15e-07!23;UBERON:0000014!8.90e-07!5;UBERON:0001003!8.90e-07!5;UBERON:0002097!8.90e-07!5;UBERON:0002199!8.90e-07!5;UBERON:0007029!8.90e-07!5;UBERON:0007376!8.90e-07!5;UBERON:0002416!8.90e-07!5;UBERON:0007383!8.90e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,7.45e-27,11;UBERON:0002410,9.37e-21,9;UBERON:0000014,4.35e-16,5;UBERON:0001003,4.35e-16,5;UBERON:0002097,4.35e-16,5;UBERON:0002199,4.35e-16,5;UBERON:0007029,4.35e-16,5;UBERON:0007376,4.35e-16,5;UBERON:0002416,4.35e-16,5;UBERON:0007383,4.35e-16,5;UBERON:0003102,2.01e-14,22;UBERON:0004121,1.83e-11,95;UBERON:0000924,1.83e-11,95;UBERON:0006601,1.83e-11,95;UBERON:0002102,7.09e-10,7;UBERON:0004710,7.09e-10,7;UBERON:0005419,7.09e-10,7;UBERON:0005417,7.09e-10,7;UBERON:0005729,7.09e-10,7;UBERON:0000013,1.48e-09,3;UBERON:0010313,2.07e-09,3;UBERON:0002342,2.07e-09,3;UBERON:0002005,2.07e-09,3;UBERON:0005428,2.07e-09,3;UBERON:0005062,2.07e-09,3;UBERON:0010708,1.30e-08,8;UBERON:0001444,6.79e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0.809265843438391,1.05798195854407,1.26766280701236,0,0.889294796111139,0,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0.284743361598206,0.186399445825301,3.48340489332647,3.17400552448499,0,0,0.679971333707751,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0,0,0.346970653532272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,1.26361379216837,0.631325567659422,0.390361328888111,0.229902104433473,0.900310649026746,2.41127708537144,1.56483948048054,2.69038812598185,2.71735001223214,0.776110112217047,0.431135985865684,0.756424320671277,1.40760899331159,1.09597866213787,1.11218899690239,1.0447564995665,1.4404749548556,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.114248512609729,0,0,0.581857461502877,0.49095073923223,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551873492609465,0.160550589987792,0,1.47541450839008,0,1.26203287766503,1.95219372148319,1.29254038639679,0.955875191810208,4.45597348164788,2.83076530788832,2.42886421004937,1.46127928955656,1.18586333383957,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0,0,0.469343416127421,0.42366414172764,0,2.4732937941222,3.22928853391811,2.5934557719107,2.02932984805332,2.1338316966858,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,1.24267862617385,0,0,0,0,0,0,0,0.5208175393758,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0.0897138566094757,0.335769232728157,0,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,1.03787347584177,0.399024873401031,0.341467211508268,0.243106717068294,0.838452650511929,0,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0.188626341386076,0.187283014939765,0.128050304809739,0.17230640686684,0.476293691283074,0,0.192909220463705,0,0,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0,0,0.789209134313529,0.135804113845862,0.561142271657738,0.474540072496697,0.29551344712669,0.409231043169689,0,0.964533054905707,0.499621155875892,0.467863216890817,0.644613162144895,0.191288332068843,0.661774257358546,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0.809265843438391,1.05798195854407,1.26766280701236,0,0.889294796111139,0,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0.284743361598206,0.186399445825301,3.48340489332647,3.17400552448499,0,0,0.679971333707751,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0,0,0.346970653532272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,1.26361379216837,0.631325567659422,0.390361328888111,0.229902104433473,0.900310649026746,2.41127708537144,1.56483948048054,2.69038812598185,2.71735001223214,0.776110112217047,0.431135985865684,0.756424320671277,1.40760899331159,1.09597866213787,1.11218899690239,1.0447564995665,1.4404749548556,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.114248512609729,0,0,0.581857461502877,0.49095073923223,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551873492609465,0.160550589987792,0,1.47541450839008,0,1.26203287766503,1.95219372148319,1.29254038639679,0.955875191810208,4.45597348164788,2.83076530788832,2.42886421004937,1.46127928955656,1.18586333383957,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0,0,0.469343416127421,0.42366414172764,0,2.4732937941222,3.22928853391811,2.5934557719107,2.02932984805332,2.1338316966858,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,1.24267862617385,0,0,0,0,0,0,0,0.5208175393758,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0.221985953374065,0.0897138566094757,0.335769232728157,0,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,1.03787347584177,0.399024873401031,0.341467211508268,0.243106717068294,0.838452650511929,0,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0.188626341386076,0.187283014939765,0.128050304809739,0.17230640686684,0.476293691283074,0,0.192909220463705,0,0,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0,0,0.789209134313529,0.135804113845862,0.561142271657738,0.474540072496697,0.29551344712669,0.409231043169689,0,0.964533054905707,0.499621155875892,0.467863216890817,0.644613162144895,0.191288332068843,0.661774257358546,0 | ||
|short_description=p8@Tfap2a | |||
}} | }} |
Latest revision as of 14:18, 1 October 2015
Short description: | p8@Tfap2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Tfap2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1645 |
Association with transcript: | -424bp_to_NM_001122948, uc007qee.2_5end |
EntrezGene: | Tfap2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 9.37e-21 | 9 |
neural cell | 5.82e-08 | 43 |
insulating cell | 8.61e-08 | 2 |
myelin accumulating cell | 8.61e-08 | 2 |
Schwann cell | 8.61e-08 | 2 |
non-myelinating Schwann cell | 8.61e-08 | 2 |
myelinating Schwann cell;;Schwann cell | 8.61e-08 | 2 |
terminal Schwann cell | 8.61e-08 | 2 |
immature Schwann cell | 8.61e-08 | 2 |
Schwann cell precursor | 8.61e-08 | 2 |
ectodermal cell | 9.97e-08 | 44 |
neurectodermal cell | 9.97e-08 | 44 |
neuron | 2.33e-07 | 33 |
neuronal stem cell | 2.33e-07 | 33 |
neuroblast | 2.33e-07 | 33 |
electrically signaling cell | 2.33e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 7.45e-27 | 11 |
autonomic nervous system | 9.37e-21 | 9 |
zone of skin | 4.35e-16 | 5 |
skin epidermis | 4.35e-16 | 5 |
skin of body | 4.35e-16 | 5 |
integument | 4.35e-16 | 5 |
surface | 4.35e-16 | 5 |
outer epithelium | 4.35e-16 | 5 |
integumental system | 4.35e-16 | 5 |
enveloping layer of ectoderm | 4.35e-16 | 5 |
surface structure | 2.01e-14 | 22 |
ectoderm-derived structure | 1.83e-11 | 95 |
ectoderm | 1.83e-11 | 95 |
presumptive ectoderm | 1.83e-11 | 95 |
forelimb | 7.09e-10 | 7 |
pectoral appendage | 7.09e-10 | 7 |
pectoral appendage bud | 7.09e-10 | 7 |
forelimb bud | 7.09e-10 | 7 |
forelimb/pectoral fin field | 7.09e-10 | 7 |
sympathetic nervous system | 1.48e-09 | 3 |
neural crest-derived structure | 2.07e-09 | 3 |
neural crest | 2.07e-09 | 3 |
enteric nervous system | 2.07e-09 | 3 |
vagal neural crest | 2.07e-09 | 3 |
neural fold | 2.07e-09 | 3 |
pectoral complex | 1.30e-08 | 8 |
subdivision of head | 6.79e-07 | 11 |