FFCP PHASE1:Mm9::chr13:29043308..29043321,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=667 | |||
|TSSclassifier=NA | |||
|UniProt=E9PXI2 | |UniProt=E9PXI2 | ||
|association_with_transcript=-297bp_to_ENSMUST00000099654_5end | |||
|cluster_id=chr13:29043308..29043321,- | |||
|description=CAGE_peak_1_at_ENSMUST00000099654_5end | |||
|id=chr13:29043308..29043321,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.43e-13,23;CL:0000337,9.43e-13,23;CL:0002609,1.39e-12,6;CL:0000540,9.59e-10,33;CL:0000047,9.59e-10,33;CL:0000031,9.59e-10,33;CL:0000404,9.59e-10,33;CL:0000393,2.01e-09,39;CL:0000211,2.01e-09,39;CL:0002613,1.19e-08,3;CL:0002319,6.60e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,6.59e-09,5;UBERON:0002435,6.59e-09,5;UBERON:0000204,6.59e-09,5;UBERON:0010082,6.59e-09,5;UBERON:0003528,4.07e-08,29;UBERON:0002791,4.07e-08,29;UBERON:0001893,4.07e-08,29;UBERON:0002780,5.04e-08,39;UBERON:0001890,5.04e-08,39;UBERON:0006240,5.04e-08,39;UBERON:0002020,5.07e-08,34;UBERON:0003080,9.22e-08,40;UBERON:0003056,4.26e-07,49 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0.468129052643987,0,0,0,0.0874204024189974,0.333109761815663,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0.261199789138935,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,1.83546752161682,0,0.436050312760893,0,0,0.139986421625363,0,0,0.725362142011344,0,0.257259436035947,0.286533439938757,0,1.21389876515759,1.5869729378161,0.633831403506179,0,0,0,0,0,0.299600110518405,0,4.14758449233911,5.26523159493594,1.68259969081106,0,0,0.979926393719632,3.06705507258356,7.35375029288017,0,0,0,1.31886287730194,1.9212405156506,1.04182674111352,0,0,0,0.294628585473668,0.142371680799103,1.1183966749518,0.605809546665472,0.529000920747499,0,0,0,0,0,0,0.140444420131752,0,0.519572009205738,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.445326417194474,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,0.11981512450592,0,0.127070227073065,0,0,1.63350657746724,0.173824320192276,0,0,0.162241263067758,0.81471491080253,0,0,0,0.650602214813519,0.229902104433473,0.540186389416048,0.90422890701429,0.544291993210623,2.17793324484245,0.937017245597288,0,0.862271971731369,0.756424320671277,0.703804496655795,0.43839146485515,1.11218899690239,1.74126083261083,0,1.19420560091096,0,0,0,0.621377317606506,0.469052119962192,0.900310307305074,0.710234206755631,0,0.462801338662135,0.697601834251224,0.268273401399619,0.583826711835847,0.493679549740441,1.80584210487005,0.162137619091711,0.146199987425332,0,0.268412837520744,0,1.85228302282712,0,0,1.49301775374664,0.232236671860439,0,0.201683524623343,0,0,0,0.329397909448022,0.502670417600539,0,0.38992817423824,0,0.432276099749388,0,0.948339504765408,0.114248512609729,0,1.01825663922657,0.775809948670503,0,0.252946148497029,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.189491411770485,1.30371981153621,0.339490171550376,0.704070744865506,0.335012514883631,0.238043640886014,0.195133647857799,1.10344600874334,0.8858587585951,0,0.327726629431476,0.345369963731791,0.433947175744535,0,0,0,0.275936746304732,0,0.117211686592203,0.491804836130026,0,0.631016438832513,0,1.07711698866399,0.238968797952552,0.445597348164788,0,0,0.584511715822624,0.395287777946524,0.321321316421807,0.709700426041343,0.534196811001766,0.651547837414304,0.329940245945071,0,1.21390318077491,0,0.377210159511796,0,0.307435147943927,0,0.727067458955011,0.712994756769443,0.316036757935816,0,0,0.340439605753788,1.08036656418786,1.29358683782755,0.643011105094777,0.177340233642274,0.713475270408282,0.164549020602121,0,0,0.42366414172764,0,0,0.161464426695906,0.301564624640779,0.119372344003136,0.164140899745061,0.291480836629851,0.18542530201051,0,0.619160603889667,0.185194527369712,0.188368457004691,0,0,0,0.419854356970974,0.276399947608848,0,0.949007980743406,0.203319467126849,0.324016022465404,0.627264888043406,0.436725127492355,0,0.330613822901344,0,0.129614973291793,0,0,0.299033092087958,0.496375471371293,0.194451188344048,0.904118764344118,0.506868376472335,0.352071715937262,0.39061315453185,0.104859344425711,0,0,0.948033361884535,1.01362607645082,0.718976700153791,0.51968329191118,0.716106782669926,0.993406773906324,1.08175904567972,0.738447635872886,0.706765149637033,0.762068066549998,1.00826185136841,0.779663045918019,0.769694733122636,1.05189211963412,0,0,0,0,0,0.187682475451182,0.549454872801795,0.428736758158132,0,0,0,0,0,0,0,0.675022500231806,0,0,0,1.3492355185943,0.798049746802062,0.512200817262403,0.486213434136588,0.209613162627982,0.367687016900028,0.44449345560323,0.412070114477788,0,0,0.25347929989024,0.377252682772152,0.280924522409647,0.384150914429216,0.402048282689293,0.476293691283074,0,0.192909220463705,0,0.883193520806384,0.685738504770831,0.887379030796687,0.476872379894642,0.581385666529314,0.282328141245992,0.0846146078916765,0.365855945745545,0.789209134313529,0.407412341537585,1.68342681497322,0.593175090620871,0.197008964751127,0.409231043169689,0,0.192906610981141,1.24905288968973,0.467863216890817,0.214871054048298,0,0.220591419119515,0.463735671240843 | |phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0.468129052643987,0,0,0,0.0874204024189974,0.333109761815663,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0.261199789138935,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,1.83546752161682,0,0.436050312760893,0,0,0.139986421625363,0,0,0.725362142011344,0,0.257259436035947,0.286533439938757,0,1.21389876515759,1.5869729378161,0.633831403506179,0,0,0,0,0,0.299600110518405,0,4.14758449233911,5.26523159493594,1.68259969081106,0,0,0.979926393719632,3.06705507258356,7.35375029288017,0,0,0,1.31886287730194,1.9212405156506,1.04182674111352,0,0,0,0.294628585473668,0.142371680799103,1.1183966749518,0.605809546665472,0.529000920747499,0,0,0,0,0,0,0.140444420131752,0,0.519572009205738,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.445326417194474,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,0.11981512450592,0,0.127070227073065,0,0,1.63350657746724,0.173824320192276,0,0,0.162241263067758,0.81471491080253,0,0,0,0.650602214813519,0.229902104433473,0.540186389416048,0.90422890701429,0.544291993210623,2.17793324484245,0.937017245597288,0,0.862271971731369,0.756424320671277,0.703804496655795,0.43839146485515,1.11218899690239,1.74126083261083,0,1.19420560091096,0,0,0,0.621377317606506,0.469052119962192,0.900310307305074,0.710234206755631,0,0.462801338662135,0.697601834251224,0.268273401399619,0.583826711835847,0.493679549740441,1.80584210487005,0.162137619091711,0.146199987425332,0,0.268412837520744,0,1.85228302282712,0,0,1.49301775374664,0.232236671860439,0,0.201683524623343,0,0,0,0.329397909448022,0.502670417600539,0,0.38992817423824,0,0.432276099749388,0,0.948339504765408,0.114248512609729,0,1.01825663922657,0.775809948670503,0,0.252946148497029,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.189491411770485,1.30371981153621,0.339490171550376,0.704070744865506,0.335012514883631,0.238043640886014,0.195133647857799,1.10344600874334,0.8858587585951,0,0.327726629431476,0.345369963731791,0.433947175744535,0,0,0,0.275936746304732,0,0.117211686592203,0.491804836130026,0,0.631016438832513,0,1.07711698866399,0.238968797952552,0.445597348164788,0,0,0.584511715822624,0.395287777946524,0.321321316421807,0.709700426041343,0.534196811001766,0.651547837414304,0.329940245945071,0,1.21390318077491,0,0.377210159511796,0,0.307435147943927,0,0.727067458955011,0.712994756769443,0.316036757935816,0,0,0.340439605753788,1.08036656418786,1.29358683782755,0.643011105094777,0.177340233642274,0.713475270408282,0.164549020602121,0,0,0.42366414172764,0,0,0.161464426695906,0.301564624640779,0.119372344003136,0.164140899745061,0.291480836629851,0.18542530201051,0,0.619160603889667,0.185194527369712,0.188368457004691,0,0,0,0.419854356970974,0.276399947608848,0,0.949007980743406,0.203319467126849,0.324016022465404,0.627264888043406,0.436725127492355,0,0.330613822901344,0,0.129614973291793,0,0,0.299033092087958,0.496375471371293,0.194451188344048,0.904118764344118,0.506868376472335,0.352071715937262,0.39061315453185,0.104859344425711,0,0,0.948033361884535,1.01362607645082,0.718976700153791,0.51968329191118,0.716106782669926,0.993406773906324,1.08175904567972,0.738447635872886,0.706765149637033,0.762068066549998,1.00826185136841,0.779663045918019,0.769694733122636,1.05189211963412,0,0,0,0,0,0.187682475451182,0.549454872801795,0.428736758158132,0,0,0,0,0,0,0,0.675022500231806,0,0,0,1.3492355185943,0.798049746802062,0.512200817262403,0.486213434136588,0.209613162627982,0.367687016900028,0.44449345560323,0.412070114477788,0,0,0.25347929989024,0.377252682772152,0.280924522409647,0.384150914429216,0.402048282689293,0.476293691283074,0,0.192909220463705,0,0.883193520806384,0.685738504770831,0.887379030796687,0.476872379894642,0.581385666529314,0.282328141245992,0.0846146078916765,0.365855945745545,0.789209134313529,0.407412341537585,1.68342681497322,0.593175090620871,0.197008964751127,0.409231043169689,0,0.192906610981141,1.24905288968973,0.467863216890817,0.214871054048298,0,0.220591419119515,0.463735671240843 | ||
|short_description=p1@ENSMUST00000099654 | |||
}} | }} |
Latest revision as of 11:38, 1 October 2015
Short description: | p1@ENSMUST00000099654 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000099654_5end |
Coexpression cluster: | MCL_coexpression_mm9:667 |
Association with transcript: | -297bp_to_ENSMUST00000099654_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.43e-13 | 23 |
neuroblast (sensu Vertebrata) | 9.43e-13 | 23 |
neuron of cerebral cortex | 1.39e-12 | 6 |
neuron | 9.59e-10 | 33 |
neuronal stem cell | 9.59e-10 | 33 |
neuroblast | 9.59e-10 | 33 |
electrically signaling cell | 9.59e-10 | 33 |
electrically responsive cell | 2.01e-09 | 39 |
electrically active cell | 2.01e-09 | 39 |
striatum neuron | 1.19e-08 | 3 |
neural cell | 6.60e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 6.59e-09 | 5 |
striatum | 6.59e-09 | 5 |
ventral part of telencephalon | 6.59e-09 | 5 |
future corpus striatum | 6.59e-09 | 5 |
brain grey matter | 4.07e-08 | 29 |
regional part of telencephalon | 4.07e-08 | 29 |
telencephalon | 4.07e-08 | 29 |
regional part of forebrain | 5.04e-08 | 39 |
forebrain | 5.04e-08 | 39 |
future forebrain | 5.04e-08 | 39 |
gray matter | 5.07e-08 | 34 |
anterior neural tube | 9.22e-08 | 40 |
pre-chordal neural plate | 4.26e-07 | 49 |