FFCP PHASE1:Mm9::chr12:11889198..11889223,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=627110 | |EntrezGene=627110 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=481bp_to_NR_003964,uc011yki.1_5end | |||
|cluster_id=chr12:11889198..11889223,- | |||
|description=CAGE_peak_1_at_Tubb2a-ps2_5end | |||
|id=chr12:11889198..11889223,- | |||
|ontology_enrichment_celltype=CL:0000117!5.38e-19!23;CL:0000337!5.38e-19!23;CL:0002319!4.47e-16!43;CL:0000055!1.58e-15!50;CL:0000221!1.87e-15!44;CL:0000133!1.87e-15!44;CL:0000540!1.02e-14!33;CL:0000047!1.02e-14!33;CL:0000031!1.02e-14!33;CL:0000404!1.02e-14!33;CL:0000393!3.98e-13!39;CL:0000211!3.98e-13!39;CL:0002321!3.15e-11!70;CL:0000220!3.15e-11!70;CL:0002609!1.33e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.64e-45,23;CL:0000337,2.64e-45,23;CL:0000540,1.17e-30,33;CL:0000047,1.17e-30,33;CL:0000031,1.17e-30,33;CL:0000404,1.17e-30,33;CL:0002319,8.64e-29,43;CL:0000221,4.64e-28,44;CL:0000133,4.64e-28,44;CL:0000393,1.82e-25,39;CL:0000211,1.82e-25,39;CL:0002609,1.38e-22,6;CL:0002321,1.65e-20,70;CL:0000120,9.65e-13,3;CL:0002608,7.13e-12,3;CL:0000723,8.98e-12,91;CL:0000048,8.98e-12,91;CL:0002612,1.00e-11,3;CL:0000034,7.92e-11,97;CL:0002611,5.24e-09,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.43e-12!75;UBERON:0001016!4.43e-12!75;UBERON:0002020!1.84e-11!34;UBERON:0001017!2.66e-11!73;UBERON:0005743!2.66e-11!73;UBERON:0004121!1.39e-09!102;UBERON:0000924!1.39e-09!102;UBERON:0006601!1.39e-09!102;UBERON:0001049!4.06e-09!52;UBERON:0005068!4.06e-09!52;UBERON:0006241!4.06e-09!52;UBERON:0007135!4.06e-09!52;UBERON:0002346!3.65e-08!71;UBERON:0003075!3.65e-08!71;UBERON:0007284!3.65e-08!71;UBERON:0002791!1.68e-07!29;UBERON:0003528!1.68e-07!29;UBERON:0001893!1.68e-07!29;UBERON:0002240!6.08e-07!6;UBERON:0005174!6.08e-07!6;UBERON:0001137!6.08e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.99e-25,34;UBERON:0001017,2.24e-19,73;UBERON:0001948,4.54e-19,5;UBERON:0002315,4.54e-19,5;UBERON:0001016,9.17e-19,75;UBERON:0001049,9.11e-18,52;UBERON:0005068,9.11e-18,52;UBERON:0006241,9.11e-18,52;UBERON:0007135,9.11e-18,52;UBERON:0000073,5.41e-17,54;UBERON:0002240,7.29e-16,6;UBERON:0005174,7.29e-16,6;UBERON:0001137,7.29e-16,6;UBERON:0004121,4.80e-14,95;UBERON:0000924,4.80e-14,95;UBERON:0006601,4.80e-14,95;UBERON:0002346,7.56e-14,64;UBERON:0003075,7.56e-14,64;UBERON:0007284,7.56e-14,64;UBERON:0003528,1.08e-13,29;UBERON:0002791,1.08e-13,29;UBERON:0001893,1.08e-13,29;UBERON:0010371,9.43e-12,73;UBERON:0002257,1.00e-11,3;UBERON:0003076,7.12e-11,12;UBERON:0003057,7.12e-11,12;UBERON:0000956,2.60e-10,21;UBERON:0001869,2.60e-10,21;UBERON:0000203,2.60e-10,21;UBERON:0002780,1.08e-09,39;UBERON:0001890,1.08e-09,39;UBERON:0006240,1.08e-09,39;UBERON:0002616,1.65e-09,46;UBERON:0003080,2.10e-09,40;UBERON:0000955,2.93e-09,47;UBERON:0006238,2.93e-09,47;UBERON:0002256,5.24e-09,2;UBERON:0010314,1.14e-08,92;UBERON:0000025,2.45e-07,114;UBERON:0003056,2.49e-07,49 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0,0,1.30815093828268,0,0.388859798148567,0,0,0,0,0,0.257259436035947,0,0,2.22548106945558,5.81890077199236,3.80298842103708,0,0,0,0,0,0.299600110518405,1.53687322128622,2.48855069540346,6.34527910158946,1.47227472945967,3.71346279724945,2.87129103237098,1.71487118900936,1.91690942036473,1.83843757322004,0,0.510749352340751,0.153606533256243,1.45074916503213,4.48289453651807,0,0.837548997004143,1.12552522006336,0.30559649555362,1.17851434189467,2.13557521198654,1.86399445825301,0.227178579999552,0.0755715601067855,0,0.860423876981386,0,1.07940638327563,0,0,0,0.170430322578058,0,0.35333957451034,0,0,2.54805239706646,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502617408451458,0,0,0,0.162241263067758,0.101839363850316,0,0,0,0,0.229902104433473,0.180062129805349,0.30140963567143,0.0680364991513279,0,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.720332286654991,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0,0.15241361331,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,1.03111909406213,0,0,0,1.35096360967266,0,0.51776031175182,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0,0,0.64183841918363,0,0,0,0.0936415074698824,0.384150914429216,0,0,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.29551344712669,0,0,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0,0,1.30815093828268,0,0.388859798148567,0,0,0,0,0,0.257259436035947,0,0,2.22548106945558,5.81890077199236,3.80298842103708,0,0,0,0,0,0.299600110518405,1.53687322128622,2.48855069540346,6.34527910158946,1.47227472945967,3.71346279724945,2.87129103237098,1.71487118900936,1.91690942036473,1.83843757322004,0,0.510749352340751,0.153606533256243,1.45074916503213,4.48289453651807,0,0.837548997004143,1.12552522006336,0.30559649555362,1.17851434189467,2.13557521198654,1.86399445825301,0.227178579999552,0.0755715601067855,0,0.860423876981386,0,1.07940638327563,0,0,0,0.170430322578058,0,0.35333957451034,0,0,2.54805239706646,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502617408451458,0,0,0,0.162241263067758,0.101839363850316,0,0,0,0,0.229902104433473,0.180062129805349,0.30140963567143,0.0680364991513279,0,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.720332286654991,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0,0.15241361331,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,1.03111909406213,0,0,0,1.35096360967266,0,0.51776031175182,0.103787347584177,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0,0,0.64183841918363,0,0,0,0.0936415074698824,0.384150914429216,0,0,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0.29551344712669,0,0,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p1@Tubb2a-ps2 | |||
}} | }} |
Latest revision as of 10:44, 26 September 2015
Short description: | p1@Tubb2a-ps2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tubb2a-ps2_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 481bp_to_NR_003964, uc011yki.1_5end |
EntrezGene: | Tubb2a-ps2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.64e-45 | 23 |
neuroblast (sensu Vertebrata) | 2.64e-45 | 23 |
neuron | 1.17e-30 | 33 |
neuronal stem cell | 1.17e-30 | 33 |
neuroblast | 1.17e-30 | 33 |
electrically signaling cell | 1.17e-30 | 33 |
neural cell | 8.64e-29 | 43 |
ectodermal cell | 4.64e-28 | 44 |
neurectodermal cell | 4.64e-28 | 44 |
electrically responsive cell | 1.82e-25 | 39 |
electrically active cell | 1.82e-25 | 39 |
neuron of cerebral cortex | 1.38e-22 | 6 |
embryonic cell | 1.65e-20 | 70 |
granule cell | 9.65e-13 | 3 |
hippocampal neuron | 7.13e-12 | 3 |
somatic stem cell | 8.98e-12 | 91 |
multi fate stem cell | 8.98e-12 | 91 |
neuron of the ventral spinal cord | 1.00e-11 | 3 |
stem cell | 7.92e-11 | 97 |
neuron of the dorsal spinal cord | 5.24e-09 | 2 |