FFCP PHASE1:Mm9::chr11:23206428..23206472,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:23206428..23206472,+ to FFCP PHASE1:Mm9::chr11:23206428..23206472,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17847 | |EntrezGene=17847 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q6ZQ93 | |UniProt=Q6ZQ93 | ||
|association_with_transcript=-422bp_to_NM_001190401,uc007ieu.2,uc011xsc.1_5end | |||
|cluster_id=chr11:23206428..23206472,+ | |||
|description=CAGE_peak_2_at_Usp34_5end | |||
|id=chr11:23206428..23206472,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!3.79e-07!24;UBERON:0001557!3.79e-07!24;UBERON:0001042!3.79e-07!24;UBERON:0008814!3.79e-07!24;UBERON:0009145!3.79e-07!24;UBERON:0002370!9.38e-07!23;UBERON:0000974!9.38e-07!23;UBERON:0004807!9.38e-07!23;UBERON:0005058!9.38e-07!23;UBERON:0003351!9.38e-07!23;UBERON:0009113!9.38e-07!23;UBERON:0003295!9.38e-07!23;UBERON:0009722!9.38e-07!23;UBERON:0005562!9.38e-07!23;UBERON:0007690!9.38e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006562,2.46e-07,24;UBERON:0001557,2.46e-07,24;UBERON:0001042,2.46e-07,24;UBERON:0008814,2.46e-07,24;UBERON:0009145,2.46e-07,24;UBERON:0002370,6.16e-07,23;UBERON:0000974,6.16e-07,23;UBERON:0004807,6.16e-07,23;UBERON:0005058,6.16e-07,23;UBERON:0003351,6.16e-07,23;UBERON:0009113,6.16e-07,23;UBERON:0003295,6.16e-07,23;UBERON:0009722,6.16e-07,23;UBERON:0005562,6.16e-07,23;UBERON:0007690,6.16e-07,23;UBERON:0000072,7.16e-07,27 | |||
|phase1_expression=1.28119077683835,2.09385244583617,1.36499771816861,0.60492842261366,0.500895729946347,2.85394762250213,1.63528848416868,1.42035655785734,3.66050677594334,5.38348410540585,3.93801326918661,2.55270908785077,2.05440875917447,1.39872643870396,0.999329285446988,2.63217847606774,4.89693314689703,1.57731082679119,2.4680598049033,1.69755860719212,2.89147186513637,0.794327609607082,0.522399578277871,1.27993938234725,0.68822784320151,1.72269589234506,0.86152399231815,1.50829862880122,0,0.504060259519861,0.665191531965914,0,1.23012957516914,0,0.288851619751275,0.166234645358492,1.02084678131185,0.837063261473815,1.5626706890476,2.09409497589519,2.35292595212406,3.41522742479223,1.45653105909346,3.02152363141385,3.75094645512204,4.40512205188036,0.782391344348039,1.30815093828268,0.439372365468944,1.1665793944457,0.699932108126813,1.43752564364972,2.51673909086605,1.45072428402269,3.02484419228218,3.60163210450326,5.15760191889762,0.515672092277442,1.21389876515759,1.5869729378161,0.633831403506179,1.69422266034566,0,1.7997994345628,0.988866362566974,0,1.49800055259202,1.15265491596466,1.03689612308478,0.675029691658453,1.47227472945967,1.14260393761521,0.662605622854841,1.46988959057945,0.575072826109418,1.83843757322004,1.10115880999389,3.19218345212969,4.14737639791857,0.923204014111357,2.10421580285542,2.6045668527838,2.51264699101243,2.25105044012672,3.0559649555362,3.24091444021034,2.27794689278565,1.1183966749518,3.10477392666055,2.79614772395106,2.89864488701678,1.72084775396277,1.3599426674155,0.539703191637817,0,3.13618820968135,0.702222100658759,1.02258193546835,0.779358013808606,0.35333957451034,1.97180787687353,5.13305909657271,10.1922095882658,0,1.08245520505607,1.77351905832569,4.04419556011827,1.94112595522402,3.6251303710604,1.33597925158342,1.38788261412909,1.21786191324856,2.30615497256059,2.71300752994721,1.41106448562846,1.13099932196708,1.97755974187499,3.03658649531814,7.96149496754887,2.91180329905337,1.54589062922275,0.969750506270444,1.86391761218122,2.04946557908083,0.628340120440365,1.02182822083437,1.7972268675888,0,0.635351135365324,2.69623150928681,1.37250180845588,2.1361239859187,4.34560800480691,1.27857728665165,2.49345653471472,1.78465389374533,2.13862664085664,1.8661045591514,1.26361379216837,1.68353484709179,2.21204753036596,1.14951052216736,2.52086981727489,2.41127708537144,2.38127747029647,1.66547836370305,1.87403449119458,1.03481348295606,1.72454394346274,2.45837904218165,3.69497360744293,1.97276159184817,0.834141747676794,2.089512999133,1.4404749548556,3.58261680273288,0,1.02939162845886,0.568326998791185,2.27838349789052,2.11073453982987,2.88099298337624,2.60419209143731,1.96764231747404,2.77680803197281,1.39520366850245,1.87791380979733,1.05088808130453,1.81015834904829,1.80584210487005,1.54030738137126,0.877199924551994,0.658650345873152,1.20785776884335,2.73376933133365,1.13195073617213,0.660837565967596,1.05780226665418,1.91959425481711,3.0190767341857,2.06187938115349,2.01683524623343,0.667134131534611,0.760902504450237,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,0.974820435595601,0,0.432276099749388,0.796565093017469,1.13800740571849,2.85621281524322,7.88954149711563,1.62921062276251,2.13347735884388,1.26244475802573,0.885311519739602,2.50937251565324,2.04098346193787,1.48076596706161,1.1858105083486,4.00428253718626,2.55526693647164,3.59779379815766,2.43432145666204,2.65294875727659,1.52775511068852,1.72617682470486,1.78348749452539,0.549122826376163,2.87536413054709,0.372140947668503,0.312037673114561,0.757736633841335,1.25578189465339,0.482443521363367,1.66277871149944,2.65287976478679,3.25929952884052,1.69745085775188,1.17345124144251,2.34508760418542,2.14239276797412,1.75620283072019,1.7339865851681,2.6575762757853,2.55127629851979,2.62181303545181,1.38147985492716,2.4590339958857,0,1.08781136763742,0.983528546038072,1.10374698521893,2.72936002979246,2.69586879162067,1.47541450839008,2.27223834483936,2.52406575533005,1.95219372148319,2.80050417052639,4.54040716109849,2.45078541490634,5.66153061577665,3.64329631507405,2.04579100537918,2.37172666767914,2.57057053137446,4.68402281187286,0.890328018336276,1.79175655288934,2.63952196756057,2.65490276679926,1.94224508923985,0.906970670894253,0.565815239267694,0.295301892880773,1.84461088766356,1.03371317267288,0.727067458955011,2.85197902707777,0.632073515871632,2.10837217149998,0,2.04263763452273,2.70091641046965,1.16422815404479,1.71469628025274,2.6601035046341,2.14042581122485,1.48094118541909,0.304464949114599,4.69343416127421,3.81297727554876,0.441056796109924,4.61681508236144,1.93757312035087,2.0506394475573,0.477489376012546,0.492422699235184,1.1659233465194,3.52308073819968,2.73393409276564,1.857481811669,1.66675074632741,1.50694765603753,2.1871076435364,1.14389086603261,1.86976272993241,0.559805809294632,0.829199842826543,0,2.21435195506795,2.84647253977588,1.72808545314882,0.836353184057875,1.74690050996942,2.02296519577231,1.1571483801547,0.523511883968059,1.16653475962614,1.86401793926078,7.32800820289447,4.33597983527538,2.81279433777066,2.33341426012857,1.03327858782185,2.36538575687089,3.28600268208111,4.81756223922615,6.60613869881978,3.14059357073808,3.45636007509439,8.21628913633263,1.82452693761148,1.74608627180206,1.81889152168913,3.22248052201467,5.36439657909415,4.08664528367894,4.13530676088816,4.03865799792591,3.35309949281999,4.7388307014315,7.60171469770069,6.5424052315424,6.19447581562315,3.62768613784338,6.65957860122194,12.2010844988887,10.2409615982088,0.965947970160952,2.81523713176773,2.38097111547445,1.71494703263253,0.501572104035363,1.12950368523413,2.76195141904306,2.86447756719698,1.89038500578056,4.11049511862385,6.0431511791176,5.40018000185445,3.15224842256954,4.53142408984205,4.65984280576638,2.28332164685189,5.1873233542134,2.21953687480374,3.8897074730927,1.88651846365184,3.12533964365024,2.00022055021454,2.67845574410562,1.92551525755089,1.26348605881899,2.78827229879264,2.26351609663291,2.71560371662659,2.24088033417042,4.07791829584854,5.71552429539688,2.43357084484197,2.31491064556446,3.29668720642645,2.79677948255355,1.37147700954166,2.66213709239006,3.33810665926249,2.0348498328526,1.97629698872194,1.09998990259179,2.37806364734604,3.15683653725411,1.90125759384206,1.68342681497322,2.25406534435931,2.85662998889134,2.45538625901814,2.32405261778949,1.92906610981141,0,1.40358965067245,1.93383948643468,1.91288332068843,1.32354851471709,2.31867835620421 | |phase1_expression=1.28119077683835,2.09385244583617,1.36499771816861,0.60492842261366,0.500895729946347,2.85394762250213,1.63528848416868,1.42035655785734,3.66050677594334,5.38348410540585,3.93801326918661,2.55270908785077,2.05440875917447,1.39872643870396,0.999329285446988,2.63217847606774,4.89693314689703,1.57731082679119,2.4680598049033,1.69755860719212,2.89147186513637,0.794327609607082,0.522399578277871,1.27993938234725,0.68822784320151,1.72269589234506,0.86152399231815,1.50829862880122,0,0.504060259519861,0.665191531965914,0,1.23012957516914,0,0.288851619751275,0.166234645358492,1.02084678131185,0.837063261473815,1.5626706890476,2.09409497589519,2.35292595212406,3.41522742479223,1.45653105909346,3.02152363141385,3.75094645512204,4.40512205188036,0.782391344348039,1.30815093828268,0.439372365468944,1.1665793944457,0.699932108126813,1.43752564364972,2.51673909086605,1.45072428402269,3.02484419228218,3.60163210450326,5.15760191889762,0.515672092277442,1.21389876515759,1.5869729378161,0.633831403506179,1.69422266034566,0,1.7997994345628,0.988866362566974,0,1.49800055259202,1.15265491596466,1.03689612308478,0.675029691658453,1.47227472945967,1.14260393761521,0.662605622854841,1.46988959057945,0.575072826109418,1.83843757322004,1.10115880999389,3.19218345212969,4.14737639791857,0.923204014111357,2.10421580285542,2.6045668527838,2.51264699101243,2.25105044012672,3.0559649555362,3.24091444021034,2.27794689278565,1.1183966749518,3.10477392666055,2.79614772395106,2.89864488701678,1.72084775396277,1.3599426674155,0.539703191637817,0,3.13618820968135,0.702222100658759,1.02258193546835,0.779358013808606,0.35333957451034,1.97180787687353,5.13305909657271,10.1922095882658,0,1.08245520505607,1.77351905832569,4.04419556011827,1.94112595522402,3.6251303710604,1.33597925158342,1.38788261412909,1.21786191324856,2.30615497256059,2.71300752994721,1.41106448562846,1.13099932196708,1.97755974187499,3.03658649531814,7.96149496754887,2.91180329905337,1.54589062922275,0.969750506270444,1.86391761218122,2.04946557908083,0.628340120440365,1.02182822083437,1.7972268675888,0,0.635351135365324,2.69623150928681,1.37250180845588,2.1361239859187,4.34560800480691,1.27857728665165,2.49345653471472,1.78465389374533,2.13862664085664,1.8661045591514,1.26361379216837,1.68353484709179,2.21204753036596,1.14951052216736,2.52086981727489,2.41127708537144,2.38127747029647,1.66547836370305,1.87403449119458,1.03481348295606,1.72454394346274,2.45837904218165,3.69497360744293,1.97276159184817,0.834141747676794,2.089512999133,1.4404749548556,3.58261680273288,0,1.02939162845886,0.568326998791185,2.27838349789052,2.11073453982987,2.88099298337624,2.60419209143731,1.96764231747404,2.77680803197281,1.39520366850245,1.87791380979733,1.05088808130453,1.81015834904829,1.80584210487005,1.54030738137126,0.877199924551994,0.658650345873152,1.20785776884335,2.73376933133365,1.13195073617213,0.660837565967596,1.05780226665418,1.91959425481711,3.0190767341857,2.06187938115349,2.01683524623343,0.667134131534611,0.760902504450237,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,0.974820435595601,0,0.432276099749388,0.796565093017469,1.13800740571849,2.85621281524322,7.88954149711563,1.62921062276251,2.13347735884388,1.26244475802573,0.885311519739602,2.50937251565324,2.04098346193787,1.48076596706161,1.1858105083486,4.00428253718626,2.55526693647164,3.59779379815766,2.43432145666204,2.65294875727659,1.52775511068852,1.72617682470486,1.78348749452539,0.549122826376163,2.87536413054709,0.372140947668503,0.312037673114561,0.757736633841335,1.25578189465339,0.482443521363367,1.66277871149944,2.65287976478679,3.25929952884052,1.69745085775188,1.17345124144251,2.34508760418542,2.14239276797412,1.75620283072019,1.7339865851681,2.6575762757853,2.55127629851979,2.62181303545181,1.38147985492716,2.4590339958857,0,1.08781136763742,0.983528546038072,1.10374698521893,2.72936002979246,2.69586879162067,1.47541450839008,2.27223834483936,2.52406575533005,1.95219372148319,2.80050417052639,4.54040716109849,2.45078541490634,5.66153061577665,3.64329631507405,2.04579100537918,2.37172666767914,2.57057053137446,4.68402281187286,0.890328018336276,1.79175655288934,2.63952196756057,2.65490276679926,1.94224508923985,0.906970670894253,0.565815239267694,0.295301892880773,1.84461088766356,1.03371317267288,0.727067458955011,2.85197902707777,0.632073515871632,2.10837217149998,0,2.04263763452273,2.70091641046965,1.16422815404479,1.71469628025274,2.6601035046341,2.14042581122485,1.48094118541909,0.304464949114599,4.69343416127421,3.81297727554876,0.441056796109924,4.61681508236144,1.93757312035087,2.0506394475573,0.477489376012546,0.492422699235184,1.1659233465194,3.52308073819968,2.73393409276564,1.857481811669,1.66675074632741,1.50694765603753,2.1871076435364,1.14389086603261,1.86976272993241,0.559805809294632,0.829199842826543,0,2.21435195506795,2.84647253977588,1.72808545314882,0.836353184057875,1.74690050996942,2.02296519577231,1.1571483801547,0.523511883968059,1.16653475962614,1.86401793926078,7.32800820289447,4.33597983527538,2.81279433777066,2.33341426012857,1.03327858782185,2.36538575687089,3.28600268208111,4.81756223922615,6.60613869881978,3.14059357073808,3.45636007509439,8.21628913633263,1.82452693761148,1.74608627180206,1.81889152168913,3.22248052201467,5.36439657909415,4.08664528367894,4.13530676088816,4.03865799792591,3.35309949281999,4.7388307014315,7.60171469770069,6.5424052315424,6.19447581562315,3.62768613784338,6.65957860122194,12.2010844988887,10.2409615982088,0.965947970160952,2.81523713176773,2.38097111547445,1.71494703263253,0.501572104035363,1.12950368523413,2.76195141904306,2.86447756719698,1.89038500578056,4.11049511862385,6.0431511791176,5.40018000185445,3.15224842256954,4.53142408984205,4.65984280576638,2.28332164685189,5.1873233542134,2.21953687480374,3.8897074730927,1.88651846365184,3.12533964365024,2.00022055021454,2.67845574410562,1.92551525755089,1.26348605881899,2.78827229879264,2.26351609663291,2.71560371662659,2.24088033417042,4.07791829584854,5.71552429539688,2.43357084484197,2.31491064556446,3.29668720642645,2.79677948255355,1.37147700954166,2.66213709239006,3.33810665926249,2.0348498328526,1.97629698872194,1.09998990259179,2.37806364734604,3.15683653725411,1.90125759384206,1.68342681497322,2.25406534435931,2.85662998889134,2.45538625901814,2.32405261778949,1.92906610981141,0,1.40358965067245,1.93383948643468,1.91288332068843,1.32354851471709,2.31867835620421 | ||
|short_description=p2@Usp34 | |||
}} | }} |
Latest revision as of 05:34, 27 September 2015
Short description: | p2@Usp34 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Usp34_5end |
Coexpression cluster: | NA |
Association with transcript: | -422bp_to_NM_001190401, uc007ieu.2, uc011xsc.1_5end |
EntrezGene: | Usp34 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pharynx | 2.46e-07 | 24 |
upper respiratory tract | 2.46e-07 | 24 |
chordate pharynx | 2.46e-07 | 24 |
pharyngeal arch system | 2.46e-07 | 24 |
pharyngeal region of foregut | 2.46e-07 | 24 |
thymus | 6.16e-07 | 23 |
neck | 6.16e-07 | 23 |
respiratory system epithelium | 6.16e-07 | 23 |
hemolymphoid system gland | 6.16e-07 | 23 |
pharyngeal epithelium | 6.16e-07 | 23 |
thymic region | 6.16e-07 | 23 |
pharyngeal gland | 6.16e-07 | 23 |
entire pharyngeal arch endoderm | 6.16e-07 | 23 |
thymus primordium | 6.16e-07 | 23 |
early pharyngeal endoderm | 6.16e-07 | 23 |
segment of respiratory tract | 7.16e-07 | 27 |