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FFCP PHASE1:Mm9::chr11:118063929..118063943,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr11:118063929..118063943,-
|DHSsupport=NA
|short_description=p9@Cyth1
|DPIdataset=NA
|description=CAGE_peak_9_at_Cyth1_5end
|association_with_transcript=-145bp_to_uc007mos.1_5end
|EntrezGene=19157
|EntrezGene=19157
|HGNC=
|HGNC=
|MCL_coexpression_id=121
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-145bp_to_uc007mos.1_5end
|cluster_id=chr11:118063929..118063943,-
|description=CAGE_peak_9_at_Cyth1_5end
|id=chr11:118063929..118063943,-
|ontology_enrichment_celltype=CL:0000540!5.28e-19!33;CL:0000047!5.28e-19!33;CL:0000031!5.28e-19!33;CL:0000404!5.28e-19!33;CL:0000393!1.60e-14!39;CL:0000211!1.60e-14!39;CL:0002319!1.36e-13!43;CL:0000117!3.46e-13!23;CL:0000337!3.46e-13!23;CL:0000221!6.24e-13!44;CL:0000133!6.24e-13!44;CL:0000055!3.21e-10!50
|ontology_enrichment_celltype_v019_2=CL:0000540,3.19e-21,33;CL:0000047,3.19e-21,33;CL:0000031,3.19e-21,33;CL:0000404,3.19e-21,33;CL:0000393,3.56e-17,39;CL:0000211,3.56e-17,39;CL:0002319,4.14e-15,43;CL:0000221,1.19e-14,44;CL:0000133,1.19e-14,44;CL:0000117,1.52e-13,23;CL:0000337,1.52e-13,23;CL:0000107,6.47e-10,9;CL:0002610,6.07e-08,3;CL:0002321,2.00e-07,70;CL:0002614,2.59e-07,3;CL:0002613,8.54e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.57e-30!73;UBERON:0005743!3.57e-30!73;UBERON:0000073!3.21e-29!75;UBERON:0001016!3.21e-29!75;UBERON:0004121!7.41e-25!102;UBERON:0000924!7.41e-25!102;UBERON:0006601!7.41e-25!102;UBERON:0002346!7.25e-23!71;UBERON:0003075!7.25e-23!71;UBERON:0007284!7.25e-23!71;UBERON:0000033!1.27e-20!63;UBERON:0001049!1.37e-20!52;UBERON:0005068!1.37e-20!52;UBERON:0006241!1.37e-20!52;UBERON:0007135!1.37e-20!52;UBERON:0000955!8.49e-20!50;UBERON:0006238!8.49e-20!50;UBERON:0002616!3.90e-19!49;UBERON:0003056!9.77e-18!49;UBERON:0002020!2.72e-17!34;UBERON:0003080!2.96e-15!40;UBERON:0002780!1.12e-14!39;UBERON:0001890!1.12e-14!39;UBERON:0006240!1.12e-14!39;UBERON:0002791!2.39e-14!29;UBERON:0003528!2.39e-14!29;UBERON:0001893!2.39e-14!29;UBERON:0007811!3.58e-13!86;UBERON:0000153!6.81e-12!94;UBERON:0000956!2.91e-09!21;UBERON:0001869!2.91e-09!21;UBERON:0000203!2.91e-09!21;UBERON:0002619!1.11e-07!17;UBERON:0002021!2.16e-07!10;UBERON:0000411!2.16e-07!10;UBERON:0001950!2.16e-07!10;UBERON:0000025!9.80e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.39e-39,73;UBERON:0001016,2.69e-38,75;UBERON:0004121,1.64e-33,95;UBERON:0000924,1.64e-33,95;UBERON:0006601,1.64e-33,95;UBERON:0002346,6.45e-29,64;UBERON:0003075,6.45e-29,64;UBERON:0007284,6.45e-29,64;UBERON:0000073,1.61e-27,54;UBERON:0010371,2.21e-24,73;UBERON:0001049,3.53e-24,52;UBERON:0005068,3.53e-24,52;UBERON:0006241,3.53e-24,52;UBERON:0007135,3.53e-24,52;UBERON:0000955,1.12e-22,47;UBERON:0006238,1.12e-22,47;UBERON:0002616,2.67e-21,46;UBERON:0010314,1.00e-17,92;UBERON:0003056,1.07e-16,49;UBERON:0003080,3.41e-16,40;UBERON:0002020,6.20e-16,34;UBERON:0002780,5.01e-15,39;UBERON:0001890,5.01e-15,39;UBERON:0006240,5.01e-15,39;UBERON:0003528,6.79e-15,29;UBERON:0002791,6.79e-15,29;UBERON:0001893,6.79e-15,29;UBERON:0002420,1.45e-12,8;UBERON:0007245,1.45e-12,8;UBERON:0010009,1.45e-12,8;UBERON:0010011,1.45e-12,8;UBERON:0000454,1.45e-12,8;UBERON:0002410,6.47e-10,9;UBERON:0002021,1.56e-09,10;UBERON:0000411,1.56e-09,10;UBERON:0001950,1.56e-09,10;UBERON:0011216,2.13e-09,194;UBERON:0003076,8.21e-09,12;UBERON:0003057,8.21e-09,12;UBERON:0002950,9.50e-09,4;UBERON:0001891,9.50e-09,4;UBERON:0009616,9.50e-09,4;UBERON:0010286,9.50e-09,4;UBERON:0004684,6.07e-08,3;UBERON:0002275,6.07e-08,3;UBERON:0000010,6.26e-08,11;UBERON:0000025,1.93e-07,114;UBERON:0002038,2.59e-07,3;UBERON:0009663,2.59e-07,3;UBERON:0009661,2.59e-07,3;UBERON:0000125,2.59e-07,3;UBERON:0002308,2.59e-07,3;UBERON:0000369,4.90e-07,5;UBERON:0002435,4.90e-07,5;UBERON:0000204,4.90e-07,5;UBERON:0010082,4.90e-07,5
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,2.64495489636016,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0.518448061542388,0.270011876663381,0.841299845405528,2.57085885963423,2.87129103237098,0.367472397644862,0.862609239164127,0.919218786610021,4.40463523997555,3.83062014255563,5.68344173048101,1.84640802822271,2.01272815925301,3.12548022334056,3.35019598801657,2.25105044012672,3.97275444219706,0.589257170947335,0.854230084794618,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.23517741427141,0.251333182659351,0,0,0,0,0,0,0,9.07620470735796,4.39838084308256,0,0.11981512450592,0,0.254140454146129,1.3481157546434,3.66000482254901,0.376963056338593,1.39059456153821,1.27857728665165,2.28566849015516,4.70499662896497,0.203678727700633,0.124406970610093,0,1.05220927943237,0.130120442962704,0.229902104433473,0,0.60281927134286,1.08858398642125,0.640568601424249,0.843315521037559,1.81092359517311,0,0.189106080167819,0,0,0,0.696504333044333,0.205782136407943,0,0.702213187313235,0.257347907114715,0,0,0,0.540186184383045,0.473489471170421,0,0.154267112887378,0,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.0810688095458557,0.584799949701329,0.439100230582101,0.134206418760372,1.26173969138476,0.720332286654991,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0,0,0,0,0,0,0,0,3.37156238974363,7.3843362553088,0,0,1.89304931649754,1.95219372148319,2.36965737506079,0.955875191810208,0.445597348164788,1.41538265394416,2.42886421004937,1.16902343164525,1.97643888973262,1.92792789853084,0,0.712262414669021,0,0,0,0,0,0.565815239267694,0,0,0,0,0,0,0,0,1.70219802876894,0.18006109403131,0.388076051348264,0.214337035031592,0,0,0,0.608929898229199,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,4.63563255026274,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0.205421914329655,0.389762468933385,0.358053391334963,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0.179427713218951,0.167884616364078,0,0,0.183151624267265,0,0,3.3885110557024,2.76195141904306,2.29158205375759,1.71853182343688,0.685082519770642,4.5323633843382,1.35004500046361,0.900642406448441,2.26571204492102,0.51776031175182,0.415149390336707,0.399024873401031,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.704276676453562,0.34461281373368,0,0.347652977834566,0.192909220463705,0.824171801606613,0.294397840268795,0.342869252385415,0,0.715308569841963,0.436039249896986,0.188218760830661,0.338458431566706,0,0,0.271608227691724,0.561142271657738,0.711810108745045,0.197008964751127,0,0.464810523557898,0.192906610981141,0,0.467863216890817,0,0.191288332068843,0.441182838239031,0.231867835620421
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,2.64495489636016,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0.518448061542388,0.270011876663381,0.841299845405528,2.57085885963423,2.87129103237098,0.367472397644862,0.862609239164127,0.919218786610021,4.40463523997555,3.83062014255563,5.68344173048101,1.84640802822271,2.01272815925301,3.12548022334056,3.35019598801657,2.25105044012672,3.97275444219706,0.589257170947335,0.854230084794618,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.23517741427141,0.251333182659351,0,0,0,0,0,0,0,9.07620470735796,4.39838084308256,0,0.11981512450592,0,0.254140454146129,1.3481157546434,3.66000482254901,0.376963056338593,1.39059456153821,1.27857728665165,2.28566849015516,4.70499662896497,0.203678727700633,0.124406970610093,0,1.05220927943237,0.130120442962704,0.229902104433473,0,0.60281927134286,1.08858398642125,0.640568601424249,0.843315521037559,1.81092359517311,0,0.189106080167819,0,0,0,0.696504333044333,0.205782136407943,0,0.702213187313235,0.257347907114715,0,0,0,0.540186184383045,0.473489471170421,0,0.154267112887378,0,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.0810688095458557,0.584799949701329,0.439100230582101,0.134206418760372,1.26173969138476,0.720332286654991,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0,0,0,0,0,0,0,0,3.37156238974363,7.3843362553088,0,0,1.89304931649754,1.95219372148319,2.36965737506079,0.955875191810208,0.445597348164788,1.41538265394416,2.42886421004937,1.16902343164525,1.97643888973262,1.92792789853084,0,0.712262414669021,0,0,0,0,0,0.565815239267694,0,0,0,0,0,0,0,0,1.70219802876894,0.18006109403131,0.388076051348264,0.214337035031592,0,0,0,0.608929898229199,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,4.63563255026274,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0.205421914329655,0.389762468933385,0.358053391334963,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0.179427713218951,0.167884616364078,0,0,0.183151624267265,0,0,3.3885110557024,2.76195141904306,2.29158205375759,1.71853182343688,0.685082519770642,4.5323633843382,1.35004500046361,0.900642406448441,2.26571204492102,0.51776031175182,0.415149390336707,0.399024873401031,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.704276676453562,0.34461281373368,0,0.347652977834566,0.192909220463705,0.824171801606613,0.294397840268795,0.342869252385415,0,0.715308569841963,0.436039249896986,0.188218760830661,0.338458431566706,0,0,0.271608227691724,0.561142271657738,0.711810108745045,0.197008964751127,0,0.464810523557898,0.192906610981141,0,0.467863216890817,0,0.191288332068843,0.441182838239031,0.231867835620421
|short_description=p9@Cyth1
}}
}}

Latest revision as of 01:31, 27 September 2015

Short description:p9@Cyth1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Cyth1_5end
Coexpression cluster:MCL_coexpression_mm9:121
Association with transcript: -145bp_to_uc007mos.1_5end
EntrezGene:Cyth1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Cyth1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B29.08
cerebellum, neonate N30.CNhs11135.1395-42I24.40
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A37.38
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.64
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.39e-3973
nervous system2.69e-3875
ectoderm-derived structure1.64e-3395
ectoderm1.64e-3395
presumptive ectoderm1.64e-3395
neurectoderm6.45e-2964
neural plate6.45e-2964
presumptive neural plate6.45e-2964
regional part of nervous system1.61e-2754
ecto-epithelium2.21e-2473
neural tube3.53e-2452
neural rod3.53e-2452
future spinal cord3.53e-2452
neural keel3.53e-2452
brain1.12e-2247
future brain1.12e-2247
regional part of brain2.67e-2146
structure with developmental contribution from neural crest1.00e-1792
pre-chordal neural plate1.07e-1649
anterior neural tube3.41e-1640
gray matter6.20e-1634
regional part of forebrain5.01e-1539
forebrain5.01e-1539
future forebrain5.01e-1539
brain grey matter6.79e-1529
regional part of telencephalon6.79e-1529
telencephalon6.79e-1529
basal ganglion1.45e-128
nuclear complex of neuraxis1.45e-128
aggregate regional part of brain1.45e-128
collection of basal ganglia1.45e-128
cerebral subcortex1.45e-128
autonomic nervous system6.47e-109
occipital lobe1.56e-0910
visual cortex1.56e-0910
neocortex1.56e-0910
organ system subdivision2.13e-09194
posterior neural tube8.21e-0912
chordal neural plate8.21e-0912
regional part of midbrain9.50e-094
midbrain9.50e-094
presumptive midbrain9.50e-094
midbrain neural tube9.50e-094
raphe nuclei6.07e-083
reticular formation6.07e-083
peripheral nervous system6.26e-0811
tube1.93e-07114
substantia nigra2.59e-073
telencephalic nucleus2.59e-073
midbrain nucleus2.59e-073
neural nucleus2.59e-073
nucleus of brain2.59e-073
corpus striatum4.90e-075
striatum4.90e-075
ventral part of telencephalon4.90e-075
future corpus striatum4.90e-075
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