FFCP PHASE1:Mm9::chr10:66998080..66998098,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=9 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:66998080..66998098,- | |||
|description=CAGE_peak_at_chr10:66998080..66998098,- | |||
|id=chr10:66998080..66998098,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,1.29e-07,6;CL:0002489,1.29e-07,6;CL:0000898,1.29e-07,6;CL:0000809,1.29e-07,6;CL:0000810,1.29e-07,6;CL:0000895,1.29e-07,6;CL:0000808,1.29e-07,6;CL:0000894,1.29e-07,6;CL:0000806,1.29e-07,6;CL:0000807,1.29e-07,6;CL:0000805,1.29e-07,6;CL:0002425,1.29e-07,6;CL:0002436,1.29e-07,6;CL:0002427,1.29e-07,6;CL:0002428,1.29e-07,6;CL:0002429,1.29e-07,6;CL:0002433,1.29e-07,6;CL:0002431,1.29e-07,6;CL:0002432,1.29e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!3.49e-08!5;UBERON:0001003!3.49e-08!5;UBERON:0002097!3.49e-08!5;UBERON:0002199!3.49e-08!5;UBERON:0007029!3.49e-08!5;UBERON:0007376!3.49e-08!5;UBERON:0002416!3.49e-08!5;UBERON:0007383!3.49e-08!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.12e-25,5;UBERON:0001003,1.12e-25,5;UBERON:0002097,1.12e-25,5;UBERON:0002199,1.12e-25,5;UBERON:0007029,1.12e-25,5;UBERON:0007376,1.12e-25,5;UBERON:0002416,1.12e-25,5;UBERON:0007383,1.12e-25,5;UBERON:0000011,1.82e-15,3;UBERON:0001301,4.50e-08,3;UBERON:0006555,4.50e-08,3;UBERON:0005103,4.50e-08,3;UBERON:0000083,4.50e-08,3;UBERON:0009201,4.50e-08,3;UBERON:0004819,4.50e-08,3;UBERON:0006553,4.50e-08,3;UBERON:0003074,4.50e-08,3;UBERON:0003060,4.50e-08,3;UBERON:0003102,5.92e-08,22 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,1.267098499365,1.63845168425395,0.513653904676515,1.51567102091139,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.47997726838022,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662605622854841,0,0,0,0,0,0,0,0,0,0,0,0,0.883885756421003,0.996601765593721,0.186399445825301,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0,12.6895110022295,53.577224787939,0,0,0,0,0.30140963567143,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,2.05782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403367049246685,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91175038362042,3.11918143715352,1.69845918473299,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0.177340233642274,1.60531935841864,2.46823530903181,0.913394847343798,0,0,0,10.5527201882547,2.9063596805263,2.23157822234177,4.29740438411291,8.042904087508,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.798049746802062,0,0.243106717068294,0,0,0.44449345560323,0.206035057238894,0,0,0.50695859978048,0.377252682772152,0.187283014939765,0.320125762024346,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0.685738504770831,0.354951612318675,0.238436189947321,0.145346416632329,0.188218760830661,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.29551344712669,0.409231043169689,0,0.578719832943424,0.499621155875892,0.233931608445408,0.214871054048298,0,1.32354851471709,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,1.267098499365,1.63845168425395,0.513653904676515,1.51567102091139,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.47997726838022,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662605622854841,0,0,0,0,0,0,0,0,0,0,0,0,0.883885756421003,0.996601765593721,0.186399445825301,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0,12.6895110022295,53.577224787939,0,0,0,0,0.30140963567143,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,2.05782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403367049246685,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91175038362042,3.11918143715352,1.69845918473299,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0.177340233642274,1.60531935841864,2.46823530903181,0.913394847343798,0,0,0,10.5527201882547,2.9063596805263,2.23157822234177,4.29740438411291,8.042904087508,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.798049746802062,0,0.243106717068294,0,0,0.44449345560323,0.206035057238894,0,0,0.50695859978048,0.377252682772152,0.187283014939765,0.320125762024346,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0.685738504770831,0.354951612318675,0.238436189947321,0.145346416632329,0.188218760830661,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.29551344712669,0.409231043169689,0,0.578719832943424,0.499621155875892,0.233931608445408,0.214871054048298,0,1.32354851471709,0 | ||
|short_description=p@chr10:66998080..66998098,- | |||
}} | }} |
Latest revision as of 14:51, 4 August 2015
Short description: | p@chr10:66998080..66998098, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:66998080..66998098, - |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymocyte | 1.29e-07 | 6 |
double negative thymocyte | 1.29e-07 | 6 |
naive T cell | 1.29e-07 | 6 |
double-positive, alpha-beta thymocyte | 1.29e-07 | 6 |
CD4-positive, alpha-beta thymocyte | 1.29e-07 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.29e-07 | 6 |
DN4 thymocyte | 1.29e-07 | 6 |
DN1 thymic pro-T cell | 1.29e-07 | 6 |
DN2 thymocyte | 1.29e-07 | 6 |
DN3 thymocyte | 1.29e-07 | 6 |
immature single positive thymocyte | 1.29e-07 | 6 |
early T lineage precursor | 1.29e-07 | 6 |
mature CD4 single-positive thymocyte | 1.29e-07 | 6 |
resting double-positive thymocyte | 1.29e-07 | 6 |
double-positive blast | 1.29e-07 | 6 |
CD69-positive double-positive thymocyte | 1.29e-07 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 1.29e-07 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.29e-07 | 6 |
CD24-positive, CD4 single-positive thymocyte | 1.29e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 1.12e-25 | 5 |
skin epidermis | 1.12e-25 | 5 |
skin of body | 1.12e-25 | 5 |
integument | 1.12e-25 | 5 |
surface | 1.12e-25 | 5 |
outer epithelium | 1.12e-25 | 5 |
integumental system | 1.12e-25 | 5 |
enveloping layer of ectoderm | 1.12e-25 | 5 |
parasympathetic nervous system | 1.82e-15 | 3 |
epididymis | 4.50e-08 | 3 |
excretory tube | 4.50e-08 | 3 |
mesonephric epithelium | 4.50e-08 | 3 |
mesonephric tubule | 4.50e-08 | 3 |
nephric duct | 4.50e-08 | 3 |
kidney epithelium | 4.50e-08 | 3 |
renal duct | 4.50e-08 | 3 |
mesonephric duct | 4.50e-08 | 3 |
pronephric duct | 4.50e-08 | 3 |
surface structure | 5.92e-08 | 22 |