FFCP PHASE1:Mm9::chr10:61573724..61573808,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr10:61573724..61573808,- to FFCP PHASE1:Mm9::chr10:61573724..61573808,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=69894 | |EntrezGene=69894 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D882 | |UniProt=Q9D882 | ||
|association_with_transcript=0bp_to_ENSMUST00000125704,ENSMUST00000142796,NM_027251,uc007fgs.1,uc007fgt.1_5end | |||
|cluster_id=chr10:61573724..61573808,- | |||
|description=CAGE_peak_1_at_2010107G23Rik_5end | |||
|id=chr10:61573724..61573808,- | |||
|ontology_enrichment_celltype=CL:0000117!1.45e-15!23;CL:0000337!1.45e-15!23;CL:0000540!1.48e-12!33;CL:0000047!1.48e-12!33;CL:0000031!1.48e-12!33;CL:0000404!1.48e-12!33;CL:0000221!8.19e-12!44;CL:0000133!8.19e-12!44;CL:0002319!1.50e-11!43;CL:0002321!5.42e-09!70;CL:0000220!5.42e-09!70;CL:0000393!1.21e-08!39;CL:0000211!1.21e-08!39;CL:0000055!1.07e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.65e-16,23;CL:0000337,7.65e-16,23;CL:0000540,8.97e-13,33;CL:0000047,8.97e-13,33;CL:0000031,8.97e-13,33;CL:0000404,8.97e-13,33;CL:0000221,5.65e-12,44;CL:0000133,5.65e-12,44;CL:0002319,1.05e-11,43;CL:0002321,5.53e-09,70;CL:0000393,2.06e-08,39;CL:0000211,2.06e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.66e-25!73;UBERON:0005743!1.66e-25!73;UBERON:0000073!4.97e-24!75;UBERON:0001016!4.97e-24!75;UBERON:0000033!1.63e-23!63;UBERON:0001049!5.06e-23!52;UBERON:0005068!5.06e-23!52;UBERON:0006241!5.06e-23!52;UBERON:0007135!5.06e-23!52;UBERON:0004121!1.45e-22!102;UBERON:0000924!1.45e-22!102;UBERON:0006601!1.45e-22!102;UBERON:0000955!2.01e-21!50;UBERON:0006238!2.01e-21!50;UBERON:0002616!5.55e-21!49;UBERON:0002346!2.39e-20!71;UBERON:0003075!2.39e-20!71;UBERON:0007284!2.39e-20!71;UBERON:0002020!4.61e-20!34;UBERON:0003056!8.69e-19!49;UBERON:0003080!1.91e-17!40;UBERON:0002780!6.22e-17!39;UBERON:0001890!6.22e-17!39;UBERON:0006240!6.22e-17!39;UBERON:0002791!7.68e-17!29;UBERON:0003528!7.68e-17!29;UBERON:0001893!7.68e-17!29;UBERON:0000956!9.96e-12!21;UBERON:0001869!9.96e-12!21;UBERON:0000203!9.96e-12!21;UBERON:0000160!6.77e-10!43;UBERON:0007811!1.56e-09!86;UBERON:0002619!2.64e-09!17;UBERON:0000153!4.35e-08!94;UBERON:0005409!5.48e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.52e-26,73;UBERON:0004121,1.46e-25,95;UBERON:0000924,1.46e-25,95;UBERON:0006601,1.46e-25,95;UBERON:0000073,8.73e-25,54;UBERON:0001016,1.99e-24,75;UBERON:0002346,2.01e-24,64;UBERON:0003075,2.01e-24,64;UBERON:0007284,2.01e-24,64;UBERON:0001049,1.89e-23,52;UBERON:0005068,1.89e-23,52;UBERON:0006241,1.89e-23,52;UBERON:0007135,1.89e-23,52;UBERON:0010371,2.39e-23,73;UBERON:0002020,1.97e-20,34;UBERON:0000955,3.27e-20,47;UBERON:0006238,3.27e-20,47;UBERON:0002616,9.06e-20,46;UBERON:0003056,3.94e-19,49;UBERON:0003080,9.24e-18,40;UBERON:0002780,3.07e-17,39;UBERON:0001890,3.07e-17,39;UBERON:0006240,3.07e-17,39;UBERON:0003528,3.81e-17,29;UBERON:0002791,3.81e-17,29;UBERON:0001893,3.81e-17,29;UBERON:0000956,6.25e-12,21;UBERON:0001869,6.25e-12,21;UBERON:0000203,6.25e-12,21;UBERON:0010314,4.30e-10,92;UBERON:0011216,1.44e-09,194;UBERON:0002619,1.85e-09,17;UBERON:0000160,9.97e-09,31;UBERON:0000344,8.09e-07,15 | |||
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| ||
|short_description=p1@2010107G23Rik | |||
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Latest revision as of 04:14, 26 September 2015
Short description: | p1@2010107G23Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_2010107G23Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000125704, ENSMUST00000142796, NM_027251, uc007fgs.1, uc007fgt.1_5end |
EntrezGene: | 2010107G23Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.65e-16 | 23 |
neuroblast (sensu Vertebrata) | 7.65e-16 | 23 |
neuron | 8.97e-13 | 33 |
neuronal stem cell | 8.97e-13 | 33 |
neuroblast | 8.97e-13 | 33 |
electrically signaling cell | 8.97e-13 | 33 |
ectodermal cell | 5.65e-12 | 44 |
neurectodermal cell | 5.65e-12 | 44 |
neural cell | 1.05e-11 | 43 |
embryonic cell | 5.53e-09 | 70 |
electrically responsive cell | 2.06e-08 | 39 |
electrically active cell | 2.06e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.52e-26 | 73 |
ectoderm-derived structure | 1.46e-25 | 95 |
ectoderm | 1.46e-25 | 95 |
presumptive ectoderm | 1.46e-25 | 95 |
regional part of nervous system | 8.73e-25 | 54 |
nervous system | 1.99e-24 | 75 |
neurectoderm | 2.01e-24 | 64 |
neural plate | 2.01e-24 | 64 |
presumptive neural plate | 2.01e-24 | 64 |
neural tube | 1.89e-23 | 52 |
neural rod | 1.89e-23 | 52 |
future spinal cord | 1.89e-23 | 52 |
neural keel | 1.89e-23 | 52 |
ecto-epithelium | 2.39e-23 | 73 |
gray matter | 1.97e-20 | 34 |
brain | 3.27e-20 | 47 |
future brain | 3.27e-20 | 47 |
regional part of brain | 9.06e-20 | 46 |
pre-chordal neural plate | 3.94e-19 | 49 |
anterior neural tube | 9.24e-18 | 40 |
regional part of forebrain | 3.07e-17 | 39 |
forebrain | 3.07e-17 | 39 |
future forebrain | 3.07e-17 | 39 |
brain grey matter | 3.81e-17 | 29 |
regional part of telencephalon | 3.81e-17 | 29 |
telencephalon | 3.81e-17 | 29 |
cerebral cortex | 6.25e-12 | 21 |
cerebral hemisphere | 6.25e-12 | 21 |
pallium | 6.25e-12 | 21 |
structure with developmental contribution from neural crest | 4.30e-10 | 92 |
organ system subdivision | 1.44e-09 | 194 |
regional part of cerebral cortex | 1.85e-09 | 17 |
intestine | 9.97e-09 | 31 |
mucosa | 8.09e-07 | 15 |