FFCP PHASE1:Mm9::chr10:60394738..60394752,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr10:60394738..60394752,+ to FFCP PHASE1:Mm9::chr10:60394738..60394752,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1899 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc007ffh.1_5end | |||
|cluster_id=chr10:60394738..60394752,+ | |||
|description=CAGE_peak_1_at_uc007ffh.1_5end | |||
|id=chr10:60394738..60394752,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,7.13e-12,2;CL:0002320,2.83e-08,46;CL:0000134,2.83e-08,46;CL:0002092,5.01e-08,3;CL:0002540,5.01e-08,3;CL:0000219,7.19e-07,54;CL:0000213,8.36e-07,1;CL:0002078,8.36e-07,1;CL:0000115,8.36e-07,1;CL:0002262,8.36e-07,1;CL:1000398,8.36e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.83e-08,46;UBERON:0002394,8.36e-07,1;UBERON:0001281,8.36e-07,1;UBERON:0000353,8.36e-07,1;UBERON:0003497,8.36e-07,1;UBERON:0003909,8.36e-07,1;UBERON:0003928,8.36e-07,1;UBERON:0003835,8.36e-07,1;UBERON:0003513,8.36e-07,1;UBERON:0001280,8.36e-07,1;UBERON:0004647,8.36e-07,1;UBERON:0002294,8.36e-07,1;UBERON:0001173,8.36e-07,1;UBERON:0004912,8.36e-07,1;UBERON:0005171,8.36e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0.630924330716475,0.548457734422955,0.42438965179803,0.17008658030214,9.73051321768676,5.48519557191764,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6996991518442,1.97773272513395,0.7104801149461,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0.075726193333184,0,2.89864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.33044095282455,0.593768556259299,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0,0.510914110417183,1.07833612055328,1.19980546198682,0.635351135365324,0,0,0,0.869121600961382,0.511430914660661,0.41557608911912,0,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.2562274405697,0,0,0,0,0,0,0,0.348252166522167,1.23469281844766,0,0,0,0.284163499395593,0,0,0.180062061461015,0,0,0,0.465067889500816,0.804820204198858,0.467061369468678,0.658239399653922,1.31333971263276,0.648550476366846,1.02339991197733,1.09775057645525,1.8788898626452,0.210289948564127,0,0.330418782983798,0,0,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0.379419222745544,0.147610147979602,0.156998727841375,0,0.592905254174298,0.166845105716094,0,0.449724224769707,0,0.241177159752417,0.50925170356284,0,0.324270453550071,0,2.87536413054709,0.372140947668503,0.936113019343682,0,0.538192240565737,0,0.554259570499814,0,0.162964976442026,0,0,0.502518772325447,0,0,0.315270288212382,0,0,0.163863314715738,0.345369963731791,0.289298117163023,7.53956419696361,2.17562273527484,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0.242780636154981,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0.220528398054962,0.98931751764888,0.322928853391811,0.241251699712623,0.238744688006273,0,0,0.18542530201051,0,0.619160603889667,0.555583582109135,0.188368457004691,0.410082683163076,0.457556346413045,0,0.419854356970974,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0,0,0.241584120826006,0,0.948033361884535,0,0.924398614483445,1.42912905275575,0.716106782669926,0.198681354781265,0.480781798079875,0.147689527174577,0.100966449948148,0.15241361331,0,0.0974578807397524,0.288635524920988,0.116876902181569,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,0.36630324853453,0,0,0,0.460325236507177,0,0.343706364687375,0,0.755393897389701,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0.44449345560323,0.206035057238894,0,0.252697211763798,0.50695859978048,0.188626341386076,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.347652977834566,0,0.412085900803307,0,0,0,0.476872379894642,0.145346416632329,0.0941093804153306,0.169229215783353,0.365855945745545,0.263069711437843,0,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0,0,0,0.644613162144895,0.382576664137687,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0.630924330716475,0.548457734422955,0.42438965179803,0.17008658030214,9.73051321768676,5.48519557191764,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6996991518442,1.97773272513395,0.7104801149461,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0.075726193333184,0,2.89864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.33044095282455,0.593768556259299,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0,0.510914110417183,1.07833612055328,1.19980546198682,0.635351135365324,0,0,0,0.869121600961382,0.511430914660661,0.41557608911912,0,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.2562274405697,0,0,0,0,0,0,0,0.348252166522167,1.23469281844766,0,0,0,0.284163499395593,0,0,0.180062061461015,0,0,0,0.465067889500816,0.804820204198858,0.467061369468678,0.658239399653922,1.31333971263276,0.648550476366846,1.02339991197733,1.09775057645525,1.8788898626452,0.210289948564127,0,0.330418782983798,0,0,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0.379419222745544,0.147610147979602,0.156998727841375,0,0.592905254174298,0.166845105716094,0,0.449724224769707,0,0.241177159752417,0.50925170356284,0,0.324270453550071,0,2.87536413054709,0.372140947668503,0.936113019343682,0,0.538192240565737,0,0.554259570499814,0,0.162964976442026,0,0,0.502518772325447,0,0,0.315270288212382,0,0,0.163863314715738,0.345369963731791,0.289298117163023,7.53956419696361,2.17562273527484,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0.242780636154981,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0.220528398054962,0.98931751764888,0.322928853391811,0.241251699712623,0.238744688006273,0,0,0.18542530201051,0,0.619160603889667,0.555583582109135,0.188368457004691,0.410082683163076,0.457556346413045,0,0.419854356970974,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0,0,0.241584120826006,0,0.948033361884535,0,0.924398614483445,1.42912905275575,0.716106782669926,0.198681354781265,0.480781798079875,0.147689527174577,0.100966449948148,0.15241361331,0,0.0974578807397524,0.288635524920988,0.116876902181569,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,0.36630324853453,0,0,0,0.460325236507177,0,0.343706364687375,0,0.755393897389701,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0.44449345560323,0.206035057238894,0,0.252697211763798,0.50695859978048,0.188626341386076,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.347652977834566,0,0.412085900803307,0,0,0,0.476872379894642,0.145346416632329,0.0941093804153306,0.169229215783353,0.365855945745545,0.263069711437843,0,0,0.118635018124174,0.197008964751127,0,0.309873682371932,0,0,0,0.644613162144895,0.382576664137687,0,0 | ||
|short_description=p1@uc007ffh.1 | |||
}} | }} |
Latest revision as of 13:11, 4 August 2015
Short description: | p1@uc007ffh.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc007ffh.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1899 |
Association with transcript: | 0bp_to_uc007ffh.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 7.13e-12 | 2 |
connective tissue cell | 2.83e-08 | 46 |
mesenchymal cell | 2.83e-08 | 46 |
bone marrow cell | 5.01e-08 | 3 |
mesenchymal stem cell of the bone marrow | 5.01e-08 | 3 |
motile cell | 7.19e-07 | 54 |
lining cell | 8.36e-07 | 1 |
meso-epithelial cell | 8.36e-07 | 1 |
endothelial cell | 8.36e-07 | 1 |
endothelial cell of sinusoid | 8.36e-07 | 1 |
endothelial cell of hepatic sinusoid | 8.36e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.83e-08 | 46 |
bile duct | 8.36e-07 | 1 |
hepatic sinusoid | 8.36e-07 | 1 |
parenchyma | 8.36e-07 | 1 |
abdomen blood vessel | 8.36e-07 | 1 |
sinusoid | 8.36e-07 | 1 |
digestive system duct | 8.36e-07 | 1 |
abdominal segment blood vessel | 8.36e-07 | 1 |
trunk blood vessel | 8.36e-07 | 1 |
liver parenchyma | 8.36e-07 | 1 |
liver lobule | 8.36e-07 | 1 |
biliary system | 8.36e-07 | 1 |
biliary tree | 8.36e-07 | 1 |
biliary bud | 8.36e-07 | 1 |
hepatic duct | 8.36e-07 | 1 |