FFCP PHASE1:Hg19::chrX:70316101..70316112,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:70316101..70316112,+ to FFCP PHASE1:Hg19::chrX:70316101..70316112,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4303 | |EntrezGene=4303 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7139 | |HGNC=7139 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000466874_5end | |||
|cluster_id=chrX:70316101..70316112,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_5_at_FOXO4_5end | |||
|id=chrX:70316101..70316112,+ | |||
|ontology_enrichment_celltype=CL:0000037!7.86e-16!172;CL:0000566!7.86e-16!172;CL:0002032!1.68e-14!165;CL:0000837!1.68e-14!165;CL:0000988!2.55e-14!182;CL:0000738!5.25e-14!140;CL:0002031!2.84e-10!124;CL:0000084!4.01e-09!25;CL:0000827!4.01e-09!25;CL:0000763!1.09e-08!112;CL:0000049!1.09e-08!112;CL:0000791!4.95e-08!18;CL:0000789!4.95e-08!18;CL:0002420!4.95e-08!18;CL:0002419!4.95e-08!18;CL:0000790!4.95e-08!18;CL:0002087!1.46e-07!119;CL:0000094!2.69e-07!8;CL:0000624!4.15e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002541;5.47e-16;3!CL:0000623;1.78e-14;3!CL:0000084;9.53e-11;25!CL:0000764;5.07e-10;2!CL:0000558;5.07e-10;2!CL:0000094;1.59e-09;8!CL:0000791;8.00e-09;18!CL:0000789;8.00e-09;18!CL:0002419;8.00e-09;18!CL:0000775;2.32e-07;3!CL:0000624;2.51e-07;6!CL:0000081;6.06e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.36e-16,3;CL:0000623,1.01e-14,3;CL:0000825,1.01e-14,3;CL:0000084,8.61e-11,25;CL:0000827,8.61e-11,25;CL:0000838,1.52e-10,52;CL:0000542,2.67e-10,53;CL:0000051,2.67e-10,53;CL:0000764,8.83e-10,2;CL:0000765,8.83e-10,2;CL:0000050,8.83e-10,2;CL:0000038,8.83e-10,2;CL:0000558,8.83e-10,2;CL:0000547,8.83e-10,2;CL:0000549,8.83e-10,2;CL:0000550,8.83e-10,2;CL:0000552,8.83e-10,2;CL:0000094,1.33e-09,8;CL:0000791,6.03e-09,18;CL:0000789,6.03e-09,18;CL:0002420,6.03e-09,18;CL:0002419,6.03e-09,18;CL:0000790,6.03e-09,18;CL:0000037,2.92e-08,168;CL:0000988,1.32e-07,177;CL:0000624,1.60e-07,6;CL:0000775,2.25e-07,3;CL:0000081,5.34e-07,11;CL:0000738,5.54e-07,136;CL:0002032,5.56e-07,161;CL:0000837,5.56e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;8.00e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;5.47e-16;3!UBERON:0000920;5.47e-16;3!UBERON:0005631;2.94e-08;10!UBERON:0000158;2.94e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,5.36e-16,3;UBERON:0003124,6.45e-12,7;UBERON:0005631,7.28e-09,14;UBERON:0000158,7.28e-09,14 | |||
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| ||
|short_description=p5@FOXO4 | |||
}} | }} |
Latest revision as of 06:37, 16 September 2015
Short description: | p5@FOXO4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FOXO4_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000466874_5end |
EntrezGene: | FOXO4 |
HGNC: | 7139 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.36e-16 | 3 |
natural killer cell | 1.01e-14 | 3 |
pro-NK cell | 1.01e-14 | 3 |
T cell | 8.61e-11 | 25 |
pro-T cell | 8.61e-11 | 25 |
lymphoid lineage restricted progenitor cell | 1.52e-10 | 52 |
lymphocyte | 2.67e-10 | 53 |
common lymphoid progenitor | 2.67e-10 | 53 |
erythroid lineage cell | 8.83e-10 | 2 |
erythroblast | 8.83e-10 | 2 |
megakaryocyte-erythroid progenitor cell | 8.83e-10 | 2 |
erythroid progenitor cell | 8.83e-10 | 2 |
reticulocyte | 8.83e-10 | 2 |
proerythroblast | 8.83e-10 | 2 |
basophilic erythroblast | 8.83e-10 | 2 |
polychromatophilic erythroblast | 8.83e-10 | 2 |
orthochromatic erythroblast | 8.83e-10 | 2 |
granulocyte | 1.33e-09 | 8 |
mature alpha-beta T cell | 6.03e-09 | 18 |
alpha-beta T cell | 6.03e-09 | 18 |
immature T cell | 6.03e-09 | 18 |
mature T cell | 6.03e-09 | 18 |
immature alpha-beta T cell | 6.03e-09 | 18 |
hematopoietic stem cell | 2.92e-08 | 168 |
hematopoietic cell | 1.32e-07 | 177 |
CD4-positive, alpha-beta T cell | 1.60e-07 | 6 |
neutrophil | 2.25e-07 | 3 |
blood cell | 5.34e-07 | 11 |
leukocyte | 5.54e-07 | 136 |
hematopoietic oligopotent progenitor cell | 5.56e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.56e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 5.36e-16 | 3 |
chorion | 6.45e-12 | 7 |
extraembryonic membrane | 7.28e-09 | 14 |
membranous layer | 7.28e-09 | 14 |