FFCP PHASE1:Hg19::chrX:47479381..47479395,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:47479381..47479395,- to FFCP PHASE1:Hg19::chrX:47479381..47479395,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6853 | |EntrezGene=6853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11494 | |HGNC=11494 | ||
|TSSclassifier=strong | |||
|UniProt=P17600 | |UniProt=P17600 | ||
|association_with_transcript=-125bp_to_NM_006950,NM_133499,uc004did.2,uc004die.2_5end | |||
|cluster_id=chrX:47479381..47479395,- | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_5_at_SYN1_5end | |||
|id=chrX:47479381..47479395,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.48e-20;2!UBERON:0006215;1.60e-13;3!UBERON:0006222;3.57e-11;1!UBERON:0006601;3.40e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.51e-55!82;UBERON:0000955!1.21e-54!69;UBERON:0006238!1.21e-54!69;UBERON:0002616!1.73e-52!59;UBERON:0005743!4.20e-52!86;UBERON:0001049!4.48e-52!57;UBERON:0005068!4.48e-52!57;UBERON:0006241!4.48e-52!57;UBERON:0007135!4.48e-52!57;UBERON:0001869!1.33e-48!32;UBERON:0002020!2.21e-48!34;UBERON:0003528!2.21e-48!34;UBERON:0001893!2.50e-48!34;UBERON:0000073!7.17e-48!94;UBERON:0001016!7.17e-48!94;UBERON:0002791!2.70e-46!33;UBERON:0002780!5.69e-45!41;UBERON:0001890!5.69e-45!41;UBERON:0006240!5.69e-45!41;UBERON:0003080!1.09e-43!42;UBERON:0002346!3.93e-41!90;UBERON:0003075!9.70e-40!86;UBERON:0007284!9.70e-40!86;UBERON:0002619!1.48e-39!22;UBERON:0001950!1.43e-35!20;UBERON:0000956!3.32e-34!25;UBERON:0000203!3.32e-34!25;UBERON:0000033!4.68e-32!123;UBERON:0000153!6.69e-30!129;UBERON:0007811!6.69e-30!129;UBERON:0007023!1.87e-29!115;UBERON:0003056!4.20e-29!61;UBERON:0000924!2.02e-28!173;UBERON:0006601!2.02e-28!173;UBERON:0004121!4.71e-27!169;UBERON:0002420!6.46e-16!9;UBERON:0007245!6.46e-16!9;UBERON:0010009!6.46e-16!9;UBERON:0010011!6.46e-16!9;UBERON:0000454!6.46e-16!9;UBERON:0002308!1.75e-15!9;UBERON:0000125!1.75e-15!9;UBERON:0001871!1.66e-13!7;UBERON:0000025!9.09e-13!194;UBERON:0009663!4.65e-12!7;UBERON:0002021!6.85e-12!5;UBERON:0000349!9.52e-12!5;UBERON:0001872!1.60e-11!5;UBERON:0000369!1.72e-10!4;UBERON:0002435!1.72e-10!4;UBERON:0000204!1.72e-10!4;UBERON:0010082!1.72e-10!4;UBERON:0004111!3.00e-10!241;UBERON:0004733!3.78e-10!12;UBERON:0002028!3.78e-10!12;UBERON:0007277!3.78e-10!12;UBERON:0000064!8.29e-10!219;UBERON:0003076!8.70e-10!15;UBERON:0003057!8.70e-10!15;UBERON:0000200!8.97e-10!6;UBERON:0004732!3.00e-09!13;UBERON:0000477!9.76e-09!286;UBERON:0002680!2.51e-08!9;UBERON:0001895!2.51e-08!9;UBERON:0010092!2.51e-08!9;UBERON:0005383!2.89e-08!3;UBERON:0005382!2.89e-08!3;UBERON:0000475!5.97e-08!365;UBERON:0002771!1.16e-07!3;UBERON:0000988!4.79e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.90e-49;32!UBERON:0001893;1.14e-44;34!UBERON:0002791;1.46e-44;32!UBERON:0000369;3.51e-39;4!UBERON:0002435;3.51e-39;4!UBERON:0000204;3.51e-39;4!UBERON:0003528;7.43e-39;34!UBERON:0002020;7.43e-39;34!UBERON:0001950;4.55e-35;20!UBERON:0002780;2.90e-34;41!UBERON:0001890;2.90e-34;41!UBERON:0002619;6.33e-32;22!UBERON:0005383;1.05e-29;3!UBERON:0005382;1.05e-29;3!UBERON:0000956;4.09e-28;25!UBERON:0000203;4.09e-28;25!UBERON:0000073;4.96e-23;53!UBERON:0002616;4.96e-23;53!UBERON:0009663;1.52e-22;7!UBERON:0001873;3.48e-20;2!UBERON:0000955;6.69e-20;68!UBERON:0001017;3.51e-19;75!UBERON:0002021;9.07e-18;5!UBERON:0002420;1.35e-17;9!UBERON:0000125;1.35e-17;9!UBERON:0007245;1.35e-17;9!UBERON:0002308;1.35e-17;9!UBERON:0010009;1.35e-17;9!UBERON:0010011;1.35e-17;9!UBERON:0000454;1.35e-17;9!UBERON:0000200;1.03e-14;6!UBERON:0001016;1.30e-12;83!UBERON:0001874;2.53e-11;1!UBERON:0001882;2.79e-11;1!UBERON:0005403;2.79e-11;1!UBERON:0002581;9.04e-11;1!UBERON:0002022;9.04e-11;1!UBERON:0007190;9.04e-11;1!UBERON:0007023;1.21e-10;114!UBERON:0001872;1.79e-08;5!UBERON:0002037;3.35e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,4.81e-54,32;UBERON:0001893,7.70e-51,34;UBERON:0002780,1.71e-48,41;UBERON:0001890,1.71e-48,41;UBERON:0003080,1.71e-48,41;UBERON:0006240,1.71e-48,41;UBERON:0000073,4.29e-48,53;UBERON:0002616,4.29e-48,53;UBERON:0002791,1.25e-46,32;UBERON:0001049,1.96e-45,56;UBERON:0005068,1.96e-45,56;UBERON:0006241,1.96e-45,56;UBERON:0007135,1.96e-45,56;UBERON:0003528,7.42e-44,34;UBERON:0002020,7.42e-44,34;UBERON:0000955,2.84e-41,68;UBERON:0006238,2.84e-41,68;UBERON:0000369,1.87e-39,4;UBERON:0002435,1.87e-39,4;UBERON:0000204,1.87e-39,4;UBERON:0010082,1.87e-39,4;UBERON:0001950,4.86e-35,20;UBERON:0001017,2.08e-34,81;UBERON:0003056,3.95e-32,61;UBERON:0002619,6.72e-32,22;UBERON:0001016,8.67e-31,89;UBERON:0003075,2.00e-30,82;UBERON:0007284,2.00e-30,82;UBERON:0005383,5.59e-30,3;UBERON:0005382,5.59e-30,3;UBERON:0002346,6.53e-29,86;UBERON:0000956,4.31e-28,25;UBERON:0000203,4.31e-28,25;UBERON:0010371,1.62e-23,104;UBERON:0009663,1.07e-22,7;UBERON:0007023,1.44e-21,114;UBERON:0001873,1.86e-20,2;UBERON:0010122,1.86e-20,2;UBERON:0010314,5.12e-18,132;UBERON:0002420,1.02e-17,9;UBERON:0000125,1.02e-17,9;UBERON:0007245,1.02e-17,9;UBERON:0002308,1.02e-17,9;UBERON:0010009,1.02e-17,9;UBERON:0010011,1.02e-17,9;UBERON:0000454,1.02e-17,9;UBERON:0002021,1.65e-17,5;UBERON:0004121,5.25e-15,171;UBERON:0000924,5.25e-15,171;UBERON:0006601,5.25e-15,171;UBERON:0000200,1.13e-14,6;UBERON:0000025,3.27e-13,192;UBERON:0011216,2.59e-12,223;UBERON:0001874,2.53e-11,1;UBERON:0001882,2.79e-11,1;UBERON:0005403,2.79e-11,1;UBERON:0002581,6.77e-11,1;UBERON:0002022,9.97e-11,1;UBERON:0007190,1.61e-10,1;UBERON:0004111,5.17e-10,240;UBERON:0001872,1.37e-08,5;UBERON:0000483,3.13e-07,306;UBERON:0002037,3.68e-07,6;UBERON:0006215,3.68e-07,6;UBERON:0000119,3.93e-07,309 | |||
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| ||
|short_description=p5@SYN1 | |||
}} | }} |
Latest revision as of 06:56, 25 September 2015
Short description: | p5@SYN1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SYN1_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -125bp_to_NM_006950, NM_133499, uc004did.2, uc004die.2_5end |
EntrezGene: | SYN1 |
HGNC: | 11494 |
UniProt: | P17600 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data