FFCP PHASE1:Hg19::chrX:47479360..47479369,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:47479360..47479369,- to FFCP PHASE1:Hg19::chrX:47479360..47479369,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6853 | |EntrezGene=6853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11494 | |HGNC=11494 | ||
|TSSclassifier=strong | |||
|UniProt=P17600 | |UniProt=P17600 | ||
|association_with_transcript=-104bp_to_NM_006950,NM_133499,uc004did.2,uc004die.2_5end | |||
|cluster_id=chrX:47479360..47479369,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_SYN1_5end | |||
|id=chrX:47479360..47479369,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.23e-16;82!UBERON:0006222;1.36e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!5.24e-54!59;UBERON:0001049!1.69e-53!57;UBERON:0005068!1.69e-53!57;UBERON:0006241!1.69e-53!57;UBERON:0007135!1.69e-53!57;UBERON:0000955!3.70e-52!69;UBERON:0006238!3.70e-52!69;UBERON:0002020!4.72e-51!34;UBERON:0003528!4.72e-51!34;UBERON:0001869!5.43e-51!32;UBERON:0001893!6.20e-51!34;UBERON:0002780!9.20e-51!41;UBERON:0001890!9.20e-51!41;UBERON:0006240!9.20e-51!41;UBERON:0003080!2.36e-49!42;UBERON:0001017!2.37e-49!82;UBERON:0002791!1.37e-48!33;UBERON:0005743!1.69e-46!86;UBERON:0000073!6.05e-41!94;UBERON:0001016!6.05e-41!94;UBERON:0002619!1.82e-40!22;UBERON:0001950!2.02e-40!20;UBERON:0003075!1.06e-39!86;UBERON:0007284!1.06e-39!86;UBERON:0002346!2.26e-39!90;UBERON:0000956!4.45e-35!25;UBERON:0000203!4.45e-35!25;UBERON:0003056!2.18e-33!61;UBERON:0000033!1.53e-31!123;UBERON:0000153!6.70e-31!129;UBERON:0007811!6.70e-31!129;UBERON:0007023!4.46e-30!115;UBERON:0000924!6.38e-22!173;UBERON:0006601!6.38e-22!173;UBERON:0004121!1.27e-21!169;UBERON:0002420!9.35e-18!9;UBERON:0007245!9.35e-18!9;UBERON:0010009!9.35e-18!9;UBERON:0010011!9.35e-18!9;UBERON:0000454!9.35e-18!9;UBERON:0002308!2.22e-17!9;UBERON:0000125!2.22e-17!9;UBERON:0000200!1.69e-15!6;UBERON:0000025!2.11e-15!194;UBERON:0001871!4.06e-15!7;UBERON:0009663!2.84e-13!7;UBERON:0002021!4.02e-13!5;UBERON:0000475!9.74e-12!365;UBERON:0000477!2.05e-11!286;UBERON:0000369!2.86e-11!4;UBERON:0002435!2.86e-11!4;UBERON:0000204!2.86e-11!4;UBERON:0010082!2.86e-11!4;UBERON:0004111!1.06e-10!241;UBERON:0000119!1.60e-10!312;UBERON:0000483!3.67e-10!309;UBERON:0000481!3.88e-10!347;UBERON:0000064!9.29e-10!219;UBERON:0005383!7.92e-09!3;UBERON:0005382!7.92e-09!3;UBERON:0001872!1.09e-08!5;UBERON:0000349!1.23e-08!5;UBERON:0002771!1.68e-08!3;UBERON:0000988!4.44e-08!3;UBERON:0002298!1.91e-07!8;UBERON:0003076!4.44e-07!15;UBERON:0003057!4.44e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.19e-68;32!UBERON:0001950;4.21e-64;20!UBERON:0002791;2.79e-63;32!UBERON:0001893;3.05e-63;34!UBERON:0002619;2.38e-58;22!UBERON:0003528;1.60e-56;34!UBERON:0002020;1.60e-56;34!UBERON:0000956;2.22e-51;25!UBERON:0000203;2.22e-51;25!UBERON:0002780;6.47e-49;41!UBERON:0001890;6.47e-49;41!UBERON:0000200;4.25e-34;6!UBERON:0000955;2.37e-33;68!UBERON:0000073;4.85e-32;53!UBERON:0002616;4.85e-32;53!UBERON:0001017;4.39e-31;75!UBERON:0001870;2.83e-25;3!UBERON:0002420;1.87e-23;9!UBERON:0007245;1.87e-23;9!UBERON:0010009;1.87e-23;9!UBERON:0010011;1.87e-23;9!UBERON:0000454;1.87e-23;9!UBERON:0000369;4.11e-20;4!UBERON:0002435;4.11e-20;4!UBERON:0000204;4.11e-20;4!UBERON:0009663;8.57e-20;7!UBERON:0001016;2.79e-19;83!UBERON:0002702;1.87e-17;2!UBERON:0002021;1.02e-15;5!UBERON:0000125;1.90e-15;9!UBERON:0002308;1.90e-15;9!UBERON:0001872;2.01e-15;5!UBERON:0005383;1.40e-12;3!UBERON:0005382;1.40e-12;3!UBERON:0001871;2.44e-11;6!UBERON:0001874;3.74e-10;1!UBERON:0001882;5.53e-10;1!UBERON:0005403;5.53e-10;1!UBERON:0002581;1.36e-09;1!UBERON:0002902;1.36e-09;1!UBERON:0002022;1.36e-09;1!UBERON:0009899;1.36e-09;1!UBERON:0007190;1.36e-09;1!UBERON:0007023;2.68e-09;114!UBERON:0011216;4.12e-08;132!UBERON:0000349;1.13e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,9.24e-79,32;UBERON:0001893,4.25e-74,34;UBERON:0002791,5.09e-70,32;UBERON:0002780,2.76e-68,41;UBERON:0001890,2.76e-68,41;UBERON:0003080,2.76e-68,41;UBERON:0006240,2.76e-68,41;UBERON:0003528,7.30e-66,34;UBERON:0002020,7.30e-66,34;UBERON:0001950,2.17e-64,20;UBERON:0001049,9.48e-61,56;UBERON:0005068,9.48e-61,56;UBERON:0006241,9.48e-61,56;UBERON:0007135,9.48e-61,56;UBERON:0002619,1.30e-58,22;UBERON:0000073,3.33e-58,53;UBERON:0002616,3.33e-58,53;UBERON:0001017,2.98e-54,81;UBERON:0000955,3.12e-54,68;UBERON:0006238,3.12e-54,68;UBERON:0000956,1.30e-51,25;UBERON:0000203,1.30e-51,25;UBERON:0001016,1.27e-48,89;UBERON:0003056,2.74e-45,61;UBERON:0003075,1.02e-40,82;UBERON:0007284,1.02e-40,82;UBERON:0002346,1.07e-38,86;UBERON:0000200,6.49e-34,6;UBERON:0010371,1.67e-31,104;UBERON:0007023,6.87e-29,114;UBERON:0001870,3.36e-25,3;UBERON:0010314,3.60e-24,132;UBERON:0004121,4.14e-24,171;UBERON:0000924,4.14e-24,171;UBERON:0006601,4.14e-24,171;UBERON:0002420,1.35e-23,9;UBERON:0007245,1.35e-23,9;UBERON:0010009,1.35e-23,9;UBERON:0010011,1.35e-23,9;UBERON:0000454,1.35e-23,9;UBERON:0000369,4.69e-20,4;UBERON:0002435,4.69e-20,4;UBERON:0000204,4.69e-20,4;UBERON:0010082,4.69e-20,4;UBERON:0009663,9.03e-20,7;UBERON:0011216,1.18e-17,223;UBERON:0002702,2.62e-17,2;UBERON:0002021,8.62e-16,5;UBERON:0000025,1.36e-15,192;UBERON:0001872,1.82e-15,5;UBERON:0000125,1.98e-15,9;UBERON:0002308,1.98e-15,9;UBERON:0005383,1.53e-12,3;UBERON:0005382,1.53e-12,3;UBERON:0004111,8.67e-12,240;UBERON:0001871,2.01e-11,6;UBERON:0001874,3.74e-10,1;UBERON:0001882,5.79e-10,1;UBERON:0005403,5.79e-10,1;UBERON:0007190,7.50e-10,1;UBERON:0002902,8.17e-10,1;UBERON:0009899,8.17e-10,1;UBERON:0002022,9.70e-10,1;UBERON:0002581,2.26e-09,1;UBERON:0000483,1.75e-08,306;UBERON:0000119,2.30e-08,309;UBERON:0000349,8.83e-08,5 | |||
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| ||
|short_description=p4@SYN1 | |||
}} | }} |
Latest revision as of 06:56, 25 September 2015
Short description: | p4@SYN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SYN1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -104bp_to_NM_006950, NM_133499, uc004did.2, uc004die.2_5end |
EntrezGene: | SYN1 |
HGNC: | 11494 |
UniProt: | P17600 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data