FFCP PHASE1:Hg19::chrX:131351353..131351404,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:131351353..131351404,- to FFCP PHASE1:Hg19::chrX:131351353..131351404,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57826 | |EntrezGene=57826 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=21165 | |HGNC=21165 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=85bp_to_uc004ewo.2_5end | |||
|cluster_id=chrX:131351353..131351404,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_RAP2C_5end | |||
|id=chrX:131351353..131351404,- | |||
|ontology_enrichment_celltype=CL:0000738!1.92e-47!140;CL:0000037!2.30e-43!172;CL:0000566!2.30e-43!172;CL:0002032!2.27e-40!165;CL:0000837!2.27e-40!165;CL:0000988!5.19e-40!182;CL:0002087!3.79e-38!119;CL:0002031!1.16e-36!124;CL:0000766!4.30e-31!76;CL:0000763!3.32e-27!112;CL:0000049!3.32e-27!112;CL:0000557!2.82e-26!71;CL:0002009!3.69e-26!65;CL:0002057!1.02e-25!42;CL:0002194!4.85e-25!63;CL:0000576!4.85e-25!63;CL:0000040!4.85e-25!63;CL:0000559!4.85e-25!63;CL:0000860!5.61e-25!45;CL:0002320!6.82e-24!365;CL:0000134!1.06e-23!358;CL:0000839!1.21e-23!70;CL:0000034!2.89e-19!444;CL:0000048!2.08e-18!430;CL:0000723!2.34e-17!436;CL:0000219!2.33e-16!390;CL:0000003!4.34e-16!722;CL:0000063!4.11e-14!578;CL:0000838!9.19e-12!52;CL:0000542!1.06e-11!53;CL:0000051!1.06e-11!53;CL:0000012!5.12e-11!682;CL:0000548!2.76e-10!679;CL:0000004!2.76e-10!679;CL:0000255!2.76e-10!679;CL:0000144!1.23e-09!625;CL:0002371!2.66e-09!591;CL:0000084!3.39e-07!25;CL:0000827!3.39e-07!25;CL:0000791!5.30e-07!18;CL:0000789!5.30e-07!18;CL:0002420!5.30e-07!18;CL:0002419!5.30e-07!18;CL:0000790!5.30e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.22e-19;33!CL:0002057;8.22e-19;33!CL:0000473;1.40e-16;39!CL:0000234;1.40e-16;39!CL:0000576;2.94e-16;48!CL:0000766;5.85e-14;69!CL:0002087;8.24e-12;104!CL:0000738;7.51e-11;136!CL:0000763;7.67e-09;100!CL:0000988;6.02e-08;177!CL:0000084;2.26e-07;25!CL:0000542;2.28e-07;53!CL:0000791;5.19e-07;18!CL:0000789;5.19e-07;18!CL:0002419;5.19e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.46e-48,136;CL:0000037,8.96e-44,168;CL:0002032,9.00e-41,161;CL:0000837,9.00e-41,161;CL:0000988,9.20e-41,177;CL:0002087,7.02e-39,115;CL:0002031,2.89e-37,120;CL:0000766,3.52e-32,72;CL:0000763,1.11e-27,108;CL:0000049,1.11e-27,108;CL:0000557,3.05e-27,67;CL:0002009,3.05e-27,61;CL:0000473,2.09e-26,48;CL:0000234,2.09e-26,48;CL:0002194,4.14e-26,59;CL:0000576,4.14e-26,59;CL:0000040,4.14e-26,59;CL:0000559,4.14e-26,59;CL:0000860,1.00e-25,42;CL:0002057,1.00e-25,42;CL:0000839,1.87e-24,66;CL:0002320,8.03e-24,361;CL:0000134,1.23e-23,354;CL:0000034,3.09e-19,441;CL:0000048,2.17e-18,427;CL:0000723,2.47e-17,433;CL:0000219,2.92e-16,386;CL:0000838,9.14e-12,52;CL:0000542,1.05e-11,53;CL:0000051,1.05e-11,53;CL:0000084,3.38e-07,25;CL:0000827,3.38e-07,25;CL:0000791,5.28e-07,18;CL:0000789,5.28e-07,18;CL:0002420,5.28e-07,18;CL:0002419,5.28e-07,18;CL:0000790,5.28e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;8.95e-19;42!CL:0000049;5.19e-08;108!CL:0000051;2.28e-07;53!CL:0000790;5.19e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.51e-30!102;UBERON:0003061!7.51e-30!102;UBERON:0002193!4.71e-28!112;UBERON:0002371!4.57e-24!80;UBERON:0002384!4.70e-23!375;UBERON:0001474!1.07e-21!86;UBERON:0004765!2.00e-20!101;UBERON:0001434!2.00e-20!101;UBERON:0002405!3.85e-18!115;UBERON:0002204!4.11e-11!167;UBERON:0003081!1.52e-07!216;UBERON:0000178!1.60e-07!15;UBERON:0000179!1.60e-07!15;UBERON:0000463!1.60e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.67e-07;15!UBERON:0000179;1.67e-07;15!UBERON:0000463;1.67e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.45e-30,98;UBERON:0003061,1.45e-30,98;UBERON:0002193,1.26e-28,108;UBERON:0002371,7.81e-25,76;UBERON:0004765,5.05e-23,90;UBERON:0002384,5.66e-23,371;UBERON:0001474,2.65e-22,82;UBERON:0002405,2.93e-22,93;UBERON:0001434,5.06e-21,100;UBERON:0002204,1.89e-11,167;UBERON:0003081,9.17e-09,203;UBERON:0000178,1.60e-07,15;UBERON:0000179,1.60e-07,15;UBERON:0000463,1.60e-07,15;UBERON:0000926,1.68e-07,315;UBERON:0004120,1.68e-07,315;UBERON:0006603,1.68e-07,315 | |||
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| ||
|short_description=p1@RAP2C | |||
}} | }} |
Latest revision as of 11:07, 19 September 2015
Short description: | p1@RAP2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAP2C_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 85bp_to_uc004ewo.2_5end |
EntrezGene: | RAP2C |
HGNC: | 21165 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.45e-30 | 98 |
blood island | 1.45e-30 | 98 |
hemolymphoid system | 1.26e-28 | 108 |
bone marrow | 7.81e-25 | 76 |
skeletal element | 5.05e-23 | 90 |
connective tissue | 5.66e-23 | 371 |
bone element | 2.65e-22 | 82 |
immune system | 2.93e-22 | 93 |
skeletal system | 5.06e-21 | 100 |
musculoskeletal system | 1.89e-11 | 167 |
lateral plate mesoderm | 9.17e-09 | 203 |
blood | 1.60e-07 | 15 |
haemolymphatic fluid | 1.60e-07 | 15 |
organism substance | 1.60e-07 | 15 |
mesoderm | 1.68e-07 | 315 |
mesoderm-derived structure | 1.68e-07 | 315 |
presumptive mesoderm | 1.68e-07 | 315 |