FFCP PHASE1:Hg19::chrX:110924562..110924571,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:110924562..110924571,+ to FFCP PHASE1:Hg19::chrX:110924562..110924571,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79868 | |EntrezGene=79868 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30881 | |HGNC=30881 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=98bp_to_ENST00000468657,ENST00000471924_5end | |||
|cluster_id=chrX:110924562..110924571,+ | |||
|coexpression_cluster_id=C890 | |||
|description=CAGE_peak_8_at_ALG13_5end | |||
|id=chrX:110924562..110924571,+ | |||
|ontology_enrichment_celltype=CL:0000860!8.21e-28!45;CL:0002057!5.13e-26!42;CL:0000738!4.93e-24!140;CL:0000766!1.91e-21!76;CL:0000557!1.17e-20!71;CL:0002087!1.84e-20!119;CL:0002031!2.31e-20!124;CL:0000839!6.44e-20!70;CL:0000037!1.04e-18!172;CL:0000566!1.04e-18!172;CL:0000988!1.05e-18!182;CL:0002009!4.56e-18!65;CL:0002194!7.08e-18!63;CL:0000576!7.08e-18!63;CL:0000040!7.08e-18!63;CL:0000559!7.08e-18!63;CL:0002032!1.64e-16!165;CL:0000837!1.64e-16!165;CL:0000763!8.88e-14!112;CL:0000049!8.88e-14!112;CL:0000624!2.19e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000624;1.04e-23;6!CL:0000791;3.48e-16;18!CL:0000789;3.48e-16;18!CL:0002419;3.48e-16;18!CL:0000898;2.05e-13;3!CL:0000226;4.09e-13;3!CL:0000842;4.09e-13;3!CL:0000860;1.79e-12;33!CL:0002057;1.79e-12;33!CL:0000623;4.55e-12;3!CL:0002087;7.14e-12;104!CL:0000084;3.45e-11;25!CL:0000815;1.66e-09;2!CL:0000792;1.66e-09;2!CL:0002677;1.66e-09;2!CL:0000473;3.14e-09;39!CL:0000234;3.14e-09;39!CL:0000542;1.06e-08;53!CL:0000766;5.85e-08;69!CL:0000097;6.15e-08;5!CL:0000576;3.45e-07;48!CL:0000738;6.67e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.06e-28,136;CL:0002031,2.21e-25,120;CL:0002087,6.22e-25,115;CL:0000624,6.24e-24,6;CL:0000037,1.16e-21,168;CL:0000988,1.59e-21,177;CL:0002032,2.41e-18,161;CL:0000837,2.41e-18,161;CL:0000791,2.23e-16,18;CL:0000789,2.23e-16,18;CL:0002420,2.23e-16,18;CL:0002419,2.23e-16,18;CL:0000790,2.23e-16,18;CL:0000838,7.94e-14,52;CL:0000542,1.68e-13,53;CL:0000051,1.68e-13,53;CL:0000898,2.06e-13,3;CL:0000226,4.28e-13,3;CL:0000842,4.28e-13,3;CL:0000860,2.71e-12,42;CL:0002057,2.71e-12,42;CL:0000557,3.41e-12,67;CL:0000623,5.32e-12,3;CL:0000825,5.32e-12,3;CL:0000084,2.53e-11,25;CL:0000827,2.53e-11,25;CL:0000766,4.52e-11,72;CL:0000839,7.19e-11,66;CL:0000473,2.05e-10,48;CL:0000234,2.05e-10,48;CL:0000815,1.74e-09,2;CL:0000792,1.74e-09,2;CL:0002677,1.74e-09,2;CL:0002009,8.80e-09,61;CL:0000097,5.61e-08,5;CL:0002028,5.61e-08,5;CL:0002194,8.42e-08,59;CL:0000576,8.42e-08,59;CL:0000040,8.42e-08,59;CL:0000559,8.42e-08,59;CL:0000763,4.02e-07,108;CL:0000049,4.02e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000790;3.48e-16;18!CL:0002057;8.81e-10;42!CL:0000051;1.06e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!5.47e-18!86;UBERON:0002371!3.31e-17!80;UBERON:0002390!3.89e-17!102;UBERON:0003061!3.89e-17!102;UBERON:0004765!1.63e-14!101;UBERON:0001434!1.63e-14!101;UBERON:0002193!2.70e-14!112;UBERON:0002405!1.24e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;3.62e-09;4!UBERON:0010133;3.62e-09;4!UBERON:0000007;2.04e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.78e-12,98;UBERON:0003061,3.78e-12,98;UBERON:0002193,1.38e-10,108;UBERON:0002371,2.54e-10,76;UBERON:0003296,2.43e-09,4;UBERON:0010133,2.43e-09,4;UBERON:0001474,2.65e-09,82;UBERON:0002405,5.68e-09,93;UBERON:0000007,1.14e-08,2;UBERON:0004765,3.67e-08,90;UBERON:0001434,5.35e-07,100 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,1.23852898652861,0,0,0,0,0,0,0,0.601633342410425,1.08505435357926,0,0,0,0.436194716338694,0,0.242584061187816,0.929716147622738,0.822335776043652,0.619412741790207,0.28769239232215,0.512321413058201,1.41889337933151,1.03423704220986,1.93645405075148,1.35426486594342,1.12945403725563,0.818718450173537,1.34834090667051,3.06083892370903,4.8139354061414,0.639337125799041,0.659702600373432,0.598390972864896,0.426224750532694,2.03146467040009,0.56738522469114,0.622822248995575,1.7587406567972,0.521482918420201,0.65156653411535,1.21079900526674,0.368277635987565,1.26584954976354,0.422510572623884,0.637812899895131,0,0.898629049171961,0.450530678524519,0.32145117339416,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0.889509253863555,0,0,0,0,0,7.39976859842283,8.80855784056408,7.64546456250458,2.64342657158052,4.48406850385229,0,1.7703879310245,1.57204305099666,2.46721798799411,0,7.17028986593899,6.15482147455153,3.89653456815823,0.111410456885174,3.53527088969805,1.99380505125259,0.541607727530031,0,0.130059347559878,0.164437904603676,0,0.289803085735052,6.3763222159686,3.21048993707656,1.04535523804977,0,4.98186641682498,2.40539211837841,1.51811815211702,0.318565414324097,0,0,0,0,0,0.236777252044017,0,1.81446068902259,2.13952156626806,1.59306844271079,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0.715471872916026,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.298897361103602,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0,0,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0.194874010322397,0,0,0,0.355009592516614,0,0,0,0,0,0.609868530647977,0.265059536642971,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0.482022059766964,0.110293972732394,0.435758888184812,0.71181185733329,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0.141775097242386,0.0895585227028483,0,0,3.94130590316755,0.088048434013226,3.52457796419313,0.432359860250884,2.39860623510122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0,0,0,0,1.18218456121156,1.72502059887614,2.05348858047597,0.254094624222463,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72182447021197,3.01999881146064,3.73546452312055,0,0,0,0,0.306923946576125,0.280660094433074,0.384417447767103,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.185803175125719,0,0.142283686696828,0,0,0,0.211673582723883,0,0,0,0,0,0.338583555603207,0,0,0,0.343505344755765,0.614481528616916,0,0,0,0.278406173895242,0,0,0.33307196799782,0,0,0,0.242721043499027,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0.123084805461069,0,0,0,0.511572370226872,0.197286811273867,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0.583209226766509,0,0.885741385813839,0,0,0,0,0.87754158861589,0.871507708151921,0,0.0769502585037971,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0.216388639742091,0,0,0,0.296521128680622,0.247127877893006,0.208843899010911,0,0,0,0,0,0,0,0,0,0.126373159256976,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.290268993867255,0.584714536689484,0.410577285266046,0.0969890164884194,0,0,0,0,0.316553979779393,0,0,0,0,0,0.229073192331831,0.171594997861965,0,0.248505071130865,0,0,0,0,0.577901179803038,0.600420288709789,0.136905378891993,0,0,0,0.837847203816763,0.229160424011684,0,0.199679000498991,0,0,0.335917362433631,0,0,0,0.0824158583811665,0,0.0984274815147488,0,0.795229689809303,0,0,0,0.415440338029185,1.5748172408605,0,0.182248669974074,0,0,0,0.528001682597033,0.179287339332845,0,0,0,0,0,0,0,1.19730191562487,0.082092520749339,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0.414239055347196,0,0,0,0,0.544017803369474,0,0,0,0,0,0.610131324509816,0,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0.467426619694449,0,0.378806010550178,0,0,0,0.151230923763239,0.466311601748341,0.147855149989634,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0,0.107410557042488,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0.327609848846413,0.491545817507439,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0.637724760305049,0.619678821295011,0,0.318004350653419,0,0,0.705351887381368,0,0.128458450192919,0,0,0.41023272848151,0,0.06915725246421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| ||
|short_description=p8@ALG13 | |||
}} | }} |
Latest revision as of 01:57, 19 September 2015
Short description: | p8@ALG13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ALG13_5end |
Coexpression cluster: | C890_CD19_CD4_Peripheral_CD8_Natural_Dendritic_Mast |
Association with transcript: | 98bp_to_ENST00000468657, ENST00000471924_5end |
EntrezGene: | ALG13 |
HGNC: | 30881 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.78e-12 | 98 |
blood island | 3.78e-12 | 98 |
hemolymphoid system | 1.38e-10 | 108 |
bone marrow | 2.54e-10 | 76 |
gland of diencephalon | 2.43e-09 | 4 |
neuroendocrine gland | 2.43e-09 | 4 |
bone element | 2.65e-09 | 82 |
immune system | 5.68e-09 | 93 |
pituitary gland | 1.14e-08 | 2 |
skeletal element | 3.67e-08 | 90 |
skeletal system | 5.35e-07 | 100 |