FFCP PHASE1:Hg19::chr9:97766469..97766518,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:97766469..97766518,+ to FFCP PHASE1:Hg19::chr9:97766469..97766518,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84909 | |EntrezGene=84909 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1361 | |HGNC=1361 | ||
|TSSclassifier=strong | |||
|UniProt=B4DU39 | |UniProt=B4DU39 | ||
|association_with_transcript=0bp_to_ENST00000433691_5end | |||
|cluster_id=chr9:97766469..97766518,+ | |||
|description=CAGE_peak_3_at_C9orf3_5end | |||
|id=chr9:97766469..97766518,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.10e-10!75;CL:0000055!3.29e-10!180;CL:0002076!1.99e-09!43;CL:0000220!1.90e-08!246;CL:0002321!3.67e-08!248;CL:0000066!1.01e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002076;6.88e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.08e-11,76;CL:0002076,3.05e-09,42;CL:0002321,3.72e-08,250;CL:0000066,4.04e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!2.05e-16!347;UBERON:0000475!1.42e-15!365;UBERON:0004119!4.34e-15!169;UBERON:0000925!4.34e-15!169;UBERON:0006595!4.34e-15!169;UBERON:0001007!1.46e-13!155;UBERON:0001555!1.46e-13!155;UBERON:0007026!1.46e-13!155;UBERON:0003104!1.60e-13!238;UBERON:0009142!1.60e-13!238;UBERON:0000468!4.63e-13!659;UBERON:0000467!2.69e-11!625;UBERON:0002100!4.60e-11!216;UBERON:0000480!5.07e-11!626;UBERON:0003102!3.16e-10!95;UBERON:0000077!4.81e-10!130;UBERON:0000477!5.28e-10!286;UBERON:0000062!5.58e-10!511;UBERON:0004921!9.55e-10!129;UBERON:0004185!9.55e-10!129;UBERON:0004923!1.51e-09!57;UBERON:0000064!2.67e-09!219;UBERON:0001004!2.35e-07!72;UBERON:0004111!3.11e-07!241;UBERON:0000483!5.90e-07!309;UBERON:0000161!6.12e-07!35 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.73e-15,160;UBERON:0000925,2.73e-15,160;UBERON:0006595,2.73e-15,160;UBERON:0001007,1.22e-13,145;UBERON:0001555,1.22e-13,145;UBERON:0007026,1.22e-13,145;UBERON:0003102,1.06e-10,99;UBERON:0004923,7.23e-10,66;UBERON:0004921,1.69e-09,118;UBERON:0002100,4.31e-09,199;UBERON:0001004,2.03e-07,74;UBERON:0000161,2.32e-07,36 | |||
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| ||
|short_description=p3@C9orf3 | |||
}} | }} |
Latest revision as of 10:22, 18 September 2015
Short description: | p3@C9orf3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C9orf3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000433691_5end |
EntrezGene: | C9orf3 |
HGNC: | 1361 |
UniProt: | B4DU39 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.08e-11 | 76 |
endo-epithelial cell | 3.05e-09 | 42 |
embryonic cell | 3.72e-08 | 250 |
epithelial cell | 4.04e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.73e-15 | 160 |
endoderm | 2.73e-15 | 160 |
presumptive endoderm | 2.73e-15 | 160 |
digestive system | 1.22e-13 | 145 |
digestive tract | 1.22e-13 | 145 |
primitive gut | 1.22e-13 | 145 |
surface structure | 1.06e-10 | 99 |
organ component layer | 7.23e-10 | 66 |
subdivision of digestive tract | 1.69e-09 | 118 |
trunk | 4.31e-09 | 199 |
respiratory system | 2.03e-07 | 74 |
orifice | 2.32e-07 | 36 |