FFCP PHASE1:Hg19::chr9:139923332..139923351,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:139923332..139923351,- to FFCP PHASE1:Hg19::chr9:139923332..139923351,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=20 | |EntrezGene=20 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32 | |HGNC=32 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000476211_5end | |||
|cluster_id=chr9:139923332..139923351,- | |||
|description=CAGE_peak_16_at_ABCA2_5end | |||
|id=chr9:139923332..139923351,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000784;4.51e-17;3!CL:0002032;2.78e-13;1!CL:0000557;2.78e-13;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,3.85e-17,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.93e-13;1!UBERON:0010122;2.82e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.19e-19!115;UBERON:0001049!4.43e-19!57;UBERON:0005068!4.43e-19!57;UBERON:0006241!4.43e-19!57;UBERON:0007135!4.43e-19!57;UBERON:0001893!5.62e-18!34;UBERON:0000955!1.28e-17!69;UBERON:0006238!1.28e-17!69;UBERON:0002020!1.47e-17!34;UBERON:0003528!1.47e-17!34;UBERON:0002791!7.07e-17!33;UBERON:0002616!1.15e-16!59;UBERON:0002780!1.41e-16!41;UBERON:0001890!1.41e-16!41;UBERON:0006240!1.41e-16!41;UBERON:0003080!5.53e-16!42;UBERON:0001869!1.03e-15!32;UBERON:0005743!2.71e-15!86;UBERON:0001017!7.99e-15!82;UBERON:0000073!1.07e-13!94;UBERON:0001016!1.07e-13!94;UBERON:0003075!1.22e-12!86;UBERON:0007284!1.22e-12!86;UBERON:0003056!9.48e-12!61;UBERON:0002346!1.43e-11!90;UBERON:0002308!1.95e-11!9;UBERON:0000125!1.95e-11!9;UBERON:0001950!3.67e-11!20;UBERON:0002619!4.29e-11!22;UBERON:0009663!1.96e-09!7;UBERON:0000153!2.30e-09!129;UBERON:0007811!2.30e-09!129;UBERON:0000956!2.85e-09!25;UBERON:0000203!2.85e-09!25;UBERON:0002420!6.20e-09!9;UBERON:0007245!6.20e-09!9;UBERON:0010009!6.20e-09!9;UBERON:0010011!6.20e-09!9;UBERON:0000454!6.20e-09!9;UBERON:0000033!1.04e-08!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0009663;7.19e-27;7!UBERON:0005162;1.37e-24;2!UBERON:0000122;1.37e-24;2!UBERON:0001875;4.22e-24;2!UBERON:0006514;4.22e-24;2!UBERON:0002420;5.53e-21;9!UBERON:0000125;5.53e-21;9!UBERON:0007245;5.53e-21;9!UBERON:0002308;5.53e-21;9!UBERON:0010009;5.53e-21;9!UBERON:0010011;5.53e-21;9!UBERON:0000454;5.53e-21;9!UBERON:0001893;1.54e-13;34!UBERON:0000941;1.93e-13;1!UBERON:0001785;1.93e-13;1!UBERON:0002464;1.93e-13;1!UBERON:0004904;1.93e-13;1!UBERON:0001021;1.93e-13;1!UBERON:0002581;6.05e-13;1!UBERON:0002336;6.05e-13;1!UBERON:0002038;6.05e-13;1!UBERON:0011215;6.05e-13;1!UBERON:0001018;6.05e-13;1!UBERON:0009661;6.05e-13;1!UBERON:0002950;6.05e-13;1!UBERON:0002473;6.05e-13;1!UBERON:0005340;6.05e-13;1!UBERON:0003544;6.05e-13;1!UBERON:0005970;6.05e-13;1!UBERON:0002316;6.05e-13;1!UBERON:0001020;6.05e-13;1!UBERON:0001891;6.05e-13;1!UBERON:0002437;6.05e-13;1!UBERON:0002791;1.79e-11;32!UBERON:0002780;2.20e-11;41!UBERON:0001890;2.20e-11;41!UBERON:0001872;3.12e-10;5!UBERON:0003528;5.80e-10;34!UBERON:0002020;5.80e-10;34!UBERON:0001869;2.24e-08;32!UBERON:0003714;2.35e-07;2!UBERON:0001873;2.82e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009663,1.04e-26,7;UBERON:0005162,1.15e-24,2;UBERON:0000122,1.15e-24,2;UBERON:0001875,4.76e-24,2;UBERON:0006514,4.76e-24,2;UBERON:0002420,7.36e-21,9;UBERON:0000125,7.36e-21,9;UBERON:0007245,7.36e-21,9;UBERON:0002308,7.36e-21,9;UBERON:0010009,7.36e-21,9;UBERON:0010011,7.36e-21,9;UBERON:0000454,7.36e-21,9;UBERON:0001893,1.27e-15,34;UBERON:0000941,2.32e-13,1;UBERON:0001785,2.32e-13,1;UBERON:0002464,2.32e-13,1;UBERON:0004904,2.32e-13,1;UBERON:0001021,2.32e-13,1;UBERON:0003902,2.32e-13,1;UBERON:0005425,2.32e-13,1;UBERON:0002336,4.23e-13,1;UBERON:0011215,4.23e-13,1;UBERON:0001018,4.23e-13,1;UBERON:0002473,4.23e-13,1;UBERON:0005340,4.23e-13,1;UBERON:0003544,4.23e-13,1;UBERON:0005970,4.23e-13,1;UBERON:0002316,4.23e-13,1;UBERON:0001020,4.23e-13,1;UBERON:0002437,4.23e-13,1;UBERON:0002581,4.77e-13,1;UBERON:0002780,6.34e-13,41;UBERON:0001890,6.34e-13,41;UBERON:0003080,6.34e-13,41;UBERON:0006240,6.34e-13,41;UBERON:0002038,1.09e-12,1;UBERON:0009661,1.09e-12,1;UBERON:0002950,1.09e-12,1;UBERON:0001891,1.09e-12,1;UBERON:0009616,1.09e-12,1;UBERON:0010286,1.09e-12,1;UBERON:0002791,2.72e-12,32;UBERON:0003528,1.43e-11,34;UBERON:0002020,1.43e-11,34;UBERON:0003056,3.61e-11,61;UBERON:0001872,3.42e-10,5;UBERON:0000073,6.42e-10,53;UBERON:0002616,6.42e-10,53;UBERON:0000955,9.57e-10,68;UBERON:0006238,9.57e-10,68;UBERON:0001049,2.30e-09,56;UBERON:0005068,2.30e-09,56;UBERON:0006241,2.30e-09,56;UBERON:0007135,2.30e-09,56;UBERON:0001016,3.64e-09,89;UBERON:0001869,9.43e-09,32;UBERON:0003075,4.00e-08,82;UBERON:0007284,4.00e-08,82;UBERON:0001017,4.40e-08,81;UBERON:0002346,1.04e-07,86;UBERON:0003714,2.58e-07,2;UBERON:0001873,2.74e-07,2;UBERON:0010122,2.74e-07,2;UBERON:0007023,3.50e-07,114 | |||
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| ||
|short_description=p16@ABCA2 | |||
}} | }} |
Latest revision as of 15:19, 16 September 2015
Short description: | p16@ABCA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_ABCA2_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000476211_5end |
EntrezGene: | ABCA2 |
HGNC: | 32 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 3.85e-17 | 3 |