FFCP PHASE1:Hg19::chr9:137619101..137619121,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:137619101..137619121,+ to FFCP PHASE1:Hg19::chr9:137619101..137619121,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:137619101..137619121,+ | |||
|coexpression_cluster_id=C396 | |||
|description=CAGE_peak_at_chr9:137619101..137619121,+ | |||
|id=chr9:137619101..137619121,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.64e-26!180;CL:0000057!2.07e-15!75;CL:0000183!3.26e-13!59;CL:0000680!1.71e-12!57;CL:0000056!1.71e-12!57;CL:0000355!1.71e-12!57;CL:0000187!6.68e-12!54;CL:0000222!1.86e-11!119;CL:0000393!4.13e-10!60;CL:0000211!4.13e-10!60;CL:0000192!9.24e-10!42;CL:0000514!9.24e-10!42;CL:0000359!1.23e-07!32;CL:0002334!1.54e-07!12;CL:0002371!2.01e-07!591;CL:0000144!2.15e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.18e-13;55!CL:0000723;1.07e-11;61!CL:0000048;2.32e-11;58!CL:0000349;1.83e-10;19!CL:0002334;3.06e-09;12!CL:0000034;3.51e-08;69!CL:0002494;4.30e-08;16!CL:0002570;6.36e-08;8!CL:0000499;1.43e-07;28!CL:0002320;1.88e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.26e-16,76;CL:0000048,1.57e-12,427;CL:0000723,7.86e-12,433;CL:0000034,6.14e-11,441;CL:0000349,2.13e-10,19;CL:0002334,4.41e-09,12;CL:0002320,2.36e-08,361;CL:0002570,4.04e-08,8;CL:0002494,4.44e-08,16;CL:0000134,5.39e-08,354;CL:0000499,1.20e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;8.19e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.84e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!5.91e-13!61;UBERON:0002036!5.91e-13!61;UBERON:0003082!5.91e-13!61;UBERON:0002385!6.49e-13!63;UBERON:0001015!6.49e-13!63;UBERON:0000383!6.49e-13!63;UBERON:0000914!1.38e-11!83;UBERON:0002329!1.38e-11!83;UBERON:0003077!1.38e-11!83;UBERON:0003059!1.38e-11!83;UBERON:0007282!1.38e-11!83;UBERON:0009618!1.38e-11!83;UBERON:0007285!1.38e-11!83;UBERON:0004872!1.47e-11!84;UBERON:0004290!8.76e-11!70;UBERON:0005256!1.96e-09!143;UBERON:0002049!2.59e-09!79;UBERON:0007798!2.59e-09!79;UBERON:0000490!4.68e-09!138;UBERON:0003914!9.39e-09!118;UBERON:0001637!1.56e-08!42;UBERON:0003509!1.56e-08!42;UBERON:0004572!1.56e-08!42;UBERON:0001013!2.53e-08!14;UBERON:0004535!2.64e-08!110;UBERON:0000478!4.85e-08!24;UBERON:0000486!5.19e-08!82;UBERON:0001009!7.55e-08!113;UBERON:0001981!9.52e-08!60;UBERON:0007500!9.52e-08!60;UBERON:0004537!9.52e-08!60;UBERON:0006965!9.52e-08!60;UBERON:0000468!8.64e-07!659;UBERON:0000055!8.79e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.97e-09;14!UBERON:0000478;1.11e-08;24!UBERON:0003104;1.56e-07;7!UBERON:0009142;1.56e-07;7!UBERON:0002384;4.14e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,2.14e-09,14;UBERON:0000478,1.26e-08,24;UBERON:0002384,1.67e-08,371;UBERON:0004872,1.06e-07,83;UBERON:0001134,3.68e-07,62;UBERON:0002036,3.68e-07,62;UBERON:0003082,3.68e-07,62 | |||
|phase1_expression=1.09007027562334,4.71021152560163,1.9733616573436,7.00513088471913,5.81049422755474,12.2127393374052,7.59899634504932,0.631719873426831,1.30592814099919,0.491467873003018,0.697801167972428,3.9319446983431,8.17677632508206,0.247532705920093,0.662794751455832,4.70627602516243,1.80808358407193,3.65155045193687,3.41552959153355,0.861847406537515,3.4680117511523,2.82109249330279,0,0.821246550437305,1.63205431473244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,3.35350429851818,0.511450247374121,1.80719576192283,5.0133791063589,8.25625158076695,0,27.7381876072502,0.567208902984407,3.32594096193846,1.49319135678314,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0.694281003215189,1.13061588384802,3.77549492588915,2.47606237746061,0.208994966536811,0,0,0.33472061276467,0,0,0.732186172644509,0,9.72170337458112,0.17859945656816,0,0.112611480483322,1.53316637465883,0,0.549605231791222,0,0,0.436094052142534,10.4364109856017,2.91250176828533,0.132409180813219,23.8074395221515,2.12801029319014,10.6528744027038,2.1349799145941,13.5667151629438,0,2.55950276932407,1.47115712802113,2.8757911252537,14.404398112,0,0,0,0,0.23486899728753,0.323745888736263,0,0.408308342509787,0.859840221182376,0.619954687054593,0,3.95627086845691,0,8.62341770179486,0.336672227908132,1.12606667884768,0,0.877955241761676,3.67785354958824,1.35214253015937,1.47461838108027,6.99619579186562,2.98980344345994,1.48352330811693,7.50227740211006,1.23663035086127,6.69865404118636,1.48893485065272,1.68776332241266,1.85130309806277,6.56327813034698,0.920498986422993,4.0411514204703,13.845374108148,1.0075209822764,1.18692414617341,0,0,0,0,0.132529768321485,0.116193942869518,0.621966330092223,0,0.36497735907583,0,7.07565032012174,0,0.928735856063958,2.16563844500876,1.41968160047813,1.85443159085912,0.723033089650446,1.21323370005633,0.871517776369625,0.71181185733329,0.404493924480493,0.784885860501384,0,0,8.41450642820675,2.057870056657,11.7606969108434,0,0,0,0,0,0.171567810298526,0,0,0,0,0.651616610620649,0,1.44331342025273,0.115930404975077,1.99594780200897,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.205654985406647,0,0,0.448524337381443,4.79556075716608,0.5867062865676,2.06834745212444,3.57656445851882,5.917119267892,0.797814349754612,5.2003718455683,0.257207374262142,1.41849132023278,0,6.14805372730035,24.4179722426149,5.76268235746538,2.93162565864362,5.33087923113819,7.91951872933429,0,0,0.299918973546171,0,0,0,2.63587341040741,3.44585807502342,0,1.59259437334337,1.2328579353023,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.858840442033979,1.50051156317903,0.813795071099207,6.03115498439341,25.336916409197,7.09660867652706,4.33423235473039,1.20378439891088,0,0,1.32845119707087,2.02806085395873,1.21637060255316,1.37060810223918,4.46086450954113,0,0,0,0.606255142892519,0,15.119514666484,4.21783273291921,3.37616341233737,17.6815859492836,3.33161788064823,1.02341449813341,7.23842645146234,10.3892646511494,2.62156479464514,7.10246901252508,0.492762936082855,4.15403543346897,1.62694529843943,0,0.601519410909855,0,1.14814448164607,2.73136752010076,2.22911505431021,0,0,0,0,0.211103257785751,1.13733384070897,0.510281115829547,0.647747748306418,1.54227252690289,0.270946437543853,2.00675909541941,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0.206082023295445,2.28923662045859,1.15513299888823,0,0.650060246036521,1.6068392984416,0.193341436584244,0.462145851343933,0.921022048356777,0.964856007391714,1.07420244868274,2.32026710262766,0.426133137080504,2.1367688555217,0,0.576570202095319,0.127612712494584,0.2023155617111,0.929691098594572,15.740617341532,0,0.924100740528266,0,0,0.55597265731176,0.715624433709956,0.744316738719335,0.632758849437452,3.43134349062885,0.511795582622668,1.28381696410176,0.636406495851874,2.35484592059769,0.719489830333259,6.58888871366531,2.70968525395079,0,4.75530963519025,2.52755073743389,0,1.46228093778771,1.05650146756755,0.409499734223957,5.79762271010222,1.13008116620243,1.10273068709225,2.65375590096488,0.438450885253763,1.15755106853338,5.24715801637306,0.608731130888112,3.40805847909725,1.69017361519345,1.00387946542836,1.3754865741837,0.7133421029625,0.354761064070598,3.58882980006029,3.62224382255892,0,1.74967360122491,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,3.58116727106535,2.37571744666111,4.30024982938925,0,0,0.111308705022906,0,0,0.996239941255349,0,0,0.409074730008619,0,2.17727711363265,0,0,0,0.0986434056369336,0,0,0,0,0,0.520855522170466,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0,1.23120413606075,1.13942055847001,0,0,0,3.19001159731919,0.457987967009312,14.9249737285218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4441205797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| ||
|short_description=p@chr9:137619101..137619121,+ | |||
}} | }} |
Latest revision as of 00:06, 1 August 2015
Short description: | p@chr9:137619101..137619121, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:137619101..137619121, + |
Coexpression cluster: | C396_Mesenchymal_Chondrocyte_Smooth_Preadipocyte_Placental_Fibroblast_Hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.26e-16 | 76 |
multi fate stem cell | 1.57e-12 | 427 |
somatic stem cell | 7.86e-12 | 433 |
stem cell | 6.14e-11 | 441 |
extraembryonic cell | 2.13e-10 | 19 |
preadipocyte | 4.41e-09 | 12 |
connective tissue cell | 2.36e-08 | 361 |
mesenchymal stem cell of adipose | 4.04e-08 | 8 |
cardiocyte | 4.44e-08 | 16 |
mesenchymal cell | 5.39e-08 | 354 |
stromal cell | 1.20e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 2.14e-09 | 14 |
extraembryonic structure | 1.26e-08 | 24 |
connective tissue | 1.67e-08 | 371 |
splanchnic layer of lateral plate mesoderm | 1.06e-07 | 83 |
skeletal muscle tissue | 3.68e-07 | 62 |
striated muscle tissue | 3.68e-07 | 62 |
myotome | 3.68e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.84e-07 | 14 |