FFCP PHASE1:Hg19::chr9:136344208..136344232,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:136344208..136344232,- to FFCP PHASE1:Hg19::chr9:136344208..136344232,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11182 | |EntrezGene=11182 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11011 | |HGNC=11011 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000371897,ENST00000485978_5end | |||
|cluster_id=chr9:136344208..136344232,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_SLC2A6_5end | |||
|id=chr9:136344208..136344232,- | |||
|ontology_enrichment_celltype=CL:0000144!1.90e-29!625;CL:0002371!1.06e-28!591;CL:0002057!1.41e-26!42;CL:0000860!7.90e-25!45;CL:0000766!9.48e-24!76;CL:0002194!1.12e-22!63;CL:0000576!1.12e-22!63;CL:0000040!1.12e-22!63;CL:0000559!1.12e-22!63;CL:0000839!1.13e-22!70;CL:0000557!3.70e-22!71;CL:0002009!3.72e-21!65;CL:0000012!2.04e-19!682;CL:0000548!8.11e-19!679;CL:0000004!8.11e-19!679;CL:0000255!8.11e-19!679;CL:0000738!1.12e-15!140;CL:0000222!1.50e-14!119;CL:0002087!3.98e-14!119;CL:0000034!8.08e-14!444;CL:0000723!8.29e-14!436;CL:0000003!1.62e-13!722;CL:0000048!1.66e-13!430;CL:0002031!1.34e-12!124;CL:0000220!5.53e-12!246;CL:0002321!9.13e-12!248;CL:0000213!8.29e-09!57;CL:0000215!8.29e-09!57;CL:0000063!8.52e-09!578;CL:0000115!1.36e-08!35;CL:0002078!1.48e-08!44;CL:0000763!2.00e-08!112;CL:0000049!2.00e-08!112;CL:0000988!3.67e-08!182;CL:0002139!5.60e-08!24;CL:0002393!2.52e-07!9;CL:0002397!2.52e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.20e-19;33!CL:0002057;6.20e-19;33!CL:0000473;1.75e-17;39!CL:0000234;1.75e-17;39!CL:0000576;8.32e-14;48!CL:0000766;1.51e-11;69!CL:0002139;5.13e-08;24!CL:0000115;1.45e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.90e-28,48;CL:0000234,1.90e-28,48;CL:0000860,1.15e-26,42;CL:0002057,1.15e-26,42;CL:0000766,7.34e-25,72;CL:0002194,7.14e-24,59;CL:0000576,7.14e-24,59;CL:0000040,7.14e-24,59;CL:0000559,7.14e-24,59;CL:0000839,9.85e-24,66;CL:0000557,3.57e-23,67;CL:0002009,3.20e-22,61;CL:0000738,5.61e-16,136;CL:0000222,2.39e-14,121;CL:0002087,2.46e-14,115;CL:0000034,1.33e-13,441;CL:0000723,1.35e-13,433;CL:0000048,2.68e-13,427;CL:0002031,9.28e-13,120;CL:0002321,7.92e-12,250;CL:0000213,3.65e-09,58;CL:0000215,3.65e-09,58;CL:0000763,4.80e-09,108;CL:0000049,4.80e-09,108;CL:0000115,6.61e-09,36;CL:0002078,7.33e-09,45;CL:0000988,2.29e-08,177;CL:0002139,5.31e-08,24;CL:0002393,2.41e-07,9;CL:0002397,2.41e-07,9;CL:0000037,5.56e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;2.53e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.40e-27!216;UBERON:0002193!1.24e-23!112;UBERON:0002390!6.35e-21!102;UBERON:0003061!6.35e-21!102;UBERON:0002371!3.43e-19!80;UBERON:0002204!5.08e-19!167;UBERON:0002405!2.11e-17!115;UBERON:0001474!2.25e-17!86;UBERON:0004765!7.64e-17!101;UBERON:0001434!7.64e-17!101;UBERON:0004535!3.35e-16!110;UBERON:0001009!1.01e-14!113;UBERON:0002049!4.94e-12!79;UBERON:0007798!4.94e-12!79;UBERON:0000467!2.39e-10!625;UBERON:0000055!2.87e-10!69;UBERON:0000923!3.41e-10!604;UBERON:0005291!3.41e-10!604;UBERON:0006598!3.41e-10!604;UBERON:0002532!3.41e-10!604;UBERON:0000480!4.35e-10!626;UBERON:0002050!5.86e-10!605;UBERON:0005423!5.86e-10!605;UBERON:0000922!2.31e-09!612;UBERON:0000926!6.68e-09!448;UBERON:0004120!6.68e-09!448;UBERON:0006603!6.68e-09!448;UBERON:0003914!7.84e-09!118;UBERON:0001981!1.39e-08!60;UBERON:0007500!1.39e-08!60;UBERON:0004537!1.39e-08!60;UBERON:0006965!1.39e-08!60;UBERON:0004872!8.59e-08!84;UBERON:0000468!1.67e-07!659;UBERON:0000486!4.63e-07!82;UBERON:0001637!9.32e-07!42;UBERON:0003509!9.32e-07!42;UBERON:0004572!9.32e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,3.15e-26,203;UBERON:0002193,2.39e-24,108;UBERON:0002390,1.28e-21,98;UBERON:0003061,1.28e-21,98;UBERON:0002405,1.55e-20,93;UBERON:0002371,6.15e-20,76;UBERON:0001474,6.50e-18,82;UBERON:0002204,1.06e-17,167;UBERON:0000926,1.97e-17,315;UBERON:0004120,1.97e-17,315;UBERON:0006603,1.97e-17,315;UBERON:0004765,1.24e-16,90;UBERON:0004535,4.28e-16,109;UBERON:0001434,5.31e-16,100;UBERON:0001009,1.64e-14,112;UBERON:0002049,5.12e-12,78;UBERON:0007798,5.12e-12,78;UBERON:0000055,3.22e-10,68;UBERON:0005423,5.28e-10,581;UBERON:0000922,8.00e-10,592;UBERON:0003914,3.80e-09,117;UBERON:0002050,1.01e-08,564;UBERON:0007500,1.48e-08,59;UBERON:0001981,1.48e-08,59;UBERON:0004537,1.48e-08,59;UBERON:0006965,1.48e-08,59;UBERON:0000923,2.68e-08,560;UBERON:0010316,2.68e-08,560;UBERON:0005291,2.68e-08,560;UBERON:0006598,2.68e-08,560;UBERON:0010317,2.68e-08,560;UBERON:0002532,2.68e-08,560;UBERON:0004872,1.17e-07,83;UBERON:0001637,9.32e-07,42;UBERON:0003509,9.32e-07,42;UBERON:0004572,9.32e-07,42 | |||
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| ||
|short_description=p1@SLC2A6 | |||
}} | }} |
Latest revision as of 07:21, 16 September 2015
Short description: | p1@SLC2A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC2A6_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000371897, ENST00000485978_5end |
EntrezGene: | SLC2A6 |
HGNC: | 11011 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.90e-28 | 48 |
phagocyte | 1.90e-28 | 48 |
classical monocyte | 1.15e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.15e-26 | 42 |
myeloid leukocyte | 7.34e-25 | 72 |
monopoietic cell | 7.14e-24 | 59 |
monocyte | 7.14e-24 | 59 |
monoblast | 7.14e-24 | 59 |
promonocyte | 7.14e-24 | 59 |
myeloid lineage restricted progenitor cell | 9.85e-24 | 66 |
granulocyte monocyte progenitor cell | 3.57e-23 | 67 |
macrophage dendritic cell progenitor | 3.20e-22 | 61 |
leukocyte | 5.61e-16 | 136 |
mesodermal cell | 2.39e-14 | 121 |
nongranular leukocyte | 2.46e-14 | 115 |
stem cell | 1.33e-13 | 441 |
somatic stem cell | 1.35e-13 | 433 |
multi fate stem cell | 2.68e-13 | 427 |
hematopoietic lineage restricted progenitor cell | 9.28e-13 | 120 |
embryonic cell | 7.92e-12 | 250 |
lining cell | 3.65e-09 | 58 |
barrier cell | 3.65e-09 | 58 |
myeloid cell | 4.80e-09 | 108 |
common myeloid progenitor | 4.80e-09 | 108 |
endothelial cell | 6.61e-09 | 36 |
meso-epithelial cell | 7.33e-09 | 45 |
hematopoietic cell | 2.29e-08 | 177 |
endothelial cell of vascular tree | 5.31e-08 | 24 |
intermediate monocyte | 2.41e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.41e-07 | 9 |
hematopoietic stem cell | 5.56e-07 | 168 |