FFCP PHASE1:Hg19::chr9:131644398..131644470,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:131644398..131644470,+ to FFCP PHASE1:Hg19::chr9:131644398..131644470,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56262 | |EntrezGene=56262 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19027 | |HGNC=19027 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWT6 | |UniProt=Q8IWT6 | ||
|association_with_transcript=-4bp_to_ENST00000372599_5end | |||
|cluster_id=chr9:131644398..131644470,+ | |||
|description=CAGE_peak_1_at_LRRC8A_5end | |||
|id=chr9:131644398..131644470,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.13e-15!248;CL:0000220!1.33e-15!246;CL:0000066!4.70e-15!254;CL:0002139!1.59e-12!24;CL:0000115!1.11e-11!35;CL:0000071!8.76e-11!18;CL:0002546!8.76e-11!18;CL:0000076!3.38e-10!62;CL:0002078!5.01e-10!44;CL:1000449!2.44e-07!16;CL:0002368!4.14e-07!13;CL:0002076!8.37e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.63e-12;24!CL:0000071;9.22e-11;18!CL:0000115;5.08e-10;36!CL:1000449;3.93e-08;15!CL:0002368;3.66e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.06e-15,250;CL:0000066,3.03e-15,253;CL:0002139,1.59e-12,24;CL:0000115,6.42e-12,36;CL:0000071,8.76e-11,18;CL:0002546,8.76e-11,18;CL:0002078,2.89e-10,45;CL:0000076,9.92e-10,63;CL:1000449,4.25e-08,15;CL:0002076,2.91e-07,42;CL:0002368,4.14e-07,13 | |||
|ontology_enrichment_development_v019=CL:0002546;9.22e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!1.47e-29!241;UBERON:0000483!5.70e-28!309;UBERON:0000119!1.68e-27!312;UBERON:0000025!8.43e-26!194;UBERON:0000477!1.66e-24!286;UBERON:0004121!1.68e-19!169;UBERON:0000924!1.81e-17!173;UBERON:0006601!1.81e-17!173;UBERON:0000475!2.65e-17!365;UBERON:0000064!3.44e-17!219;UBERON:0000033!1.78e-16!123;UBERON:0003075!6.41e-16!86;UBERON:0007284!6.41e-16!86;UBERON:0000153!4.14e-15!129;UBERON:0007811!4.14e-15!129;UBERON:0000467!8.36e-15!625;UBERON:0000480!1.43e-14!626;UBERON:0005743!3.53e-14!86;UBERON:0000468!5.95e-14!659;UBERON:0000481!7.60e-14!347;UBERON:0001017!1.46e-13!82;UBERON:0001049!1.54e-13!57;UBERON:0005068!1.54e-13!57;UBERON:0006241!1.54e-13!57;UBERON:0007135!1.54e-13!57;UBERON:0002346!2.22e-13!90;UBERON:0002049!8.98e-13!79;UBERON:0007798!8.98e-13!79;UBERON:0003914!1.15e-12!118;UBERON:0000055!1.60e-12!69;UBERON:0000073!1.90e-12!94;UBERON:0001016!1.90e-12!94;UBERON:0000922!5.70e-12!612;UBERON:0007023!7.98e-12!115;UBERON:0003056!8.21e-12!61;UBERON:0000923!8.35e-12!604;UBERON:0005291!8.35e-12!604;UBERON:0006598!8.35e-12!604;UBERON:0002532!8.35e-12!604;UBERON:0002050!1.12e-11!605;UBERON:0005423!1.12e-11!605;UBERON:0000955!2.20e-11!69;UBERON:0006238!2.20e-11!69;UBERON:0002616!2.85e-11!59;UBERON:0001981!4.55e-11!60;UBERON:0007500!4.55e-11!60;UBERON:0004537!4.55e-11!60;UBERON:0006965!4.55e-11!60;UBERON:0001986!8.76e-11!18;UBERON:0004638!8.76e-11!18;UBERON:0004852!8.76e-11!18;UBERON:0002020!1.59e-10!34;UBERON:0003528!1.59e-10!34;UBERON:0000487!2.45e-10!22;UBERON:0001893!2.51e-10!34;UBERON:0002791!6.40e-10!33;UBERON:0001869!9.14e-10!32;UBERON:0003080!1.22e-09!42;UBERON:0002780!2.37e-09!41;UBERON:0001890!2.37e-09!41;UBERON:0006240!2.37e-09!41;UBERON:0004872!5.40e-09!84;UBERON:0004535!1.19e-08!110;UBERON:0001009!1.23e-08!113;UBERON:0006914!1.08e-07!25;UBERON:0000956!2.16e-07!25;UBERON:0000203!2.16e-07!25;UBERON:0004211!2.44e-07!16;UBERON:0001285!2.44e-07!16;UBERON:0007684!2.44e-07!16;UBERON:0003220!2.44e-07!16;UBERON:0004208!2.44e-07!16;UBERON:0000353!7.51e-07!17;UBERON:0002619!9.84e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.22e-11;18!UBERON:0001986;9.22e-11;18!UBERON:0004852;9.22e-11;18!UBERON:0000487;2.38e-10;22!UBERON:0001893;2.52e-09;34!UBERON:0003528;4.27e-09;34!UBERON:0002020;4.27e-09;34!UBERON:0001869;6.37e-09;32!UBERON:0002791;7.96e-09;32!UBERON:0000490;1.40e-08;33!UBERON:0003914;2.72e-08;74!UBERON:0006555;3.93e-08;15!UBERON:0004819;3.93e-08;15!UBERON:0001285;3.93e-08;15!UBERON:0007684;3.93e-08;15!UBERON:0006914;1.24e-07;25!UBERON:0000956;2.17e-07;25!UBERON:0000203;2.17e-07;25!UBERON:0000073;2.52e-07;53!UBERON:0002616;2.52e-07;53!UBERON:0000353;3.79e-07;15!UBERON:0002780;4.97e-07;41!UBERON:0001890;4.97e-07;41!UBERON:0000025;8.08e-07;93!UBERON:0002619;9.47e-07;22 | |||
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| ||
|short_description=p1@LRRC8A | |||
}} | }} |
Latest revision as of 21:01, 15 September 2015
Short description: | p1@LRRC8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRRC8A_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000372599_5end |
EntrezGene: | LRRC8A |
HGNC: | 19027 |
UniProt: | Q8IWT6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.06e-15 | 250 |
epithelial cell | 3.03e-15 | 253 |
endothelial cell of vascular tree | 1.59e-12 | 24 |
endothelial cell | 6.42e-12 | 36 |
blood vessel endothelial cell | 8.76e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.76e-11 | 18 |
meso-epithelial cell | 2.89e-10 | 45 |
squamous epithelial cell | 9.92e-10 | 63 |
epithelial cell of nephron | 4.25e-08 | 15 |
endo-epithelial cell | 2.91e-07 | 42 |
respiratory epithelial cell | 4.14e-07 | 13 |