FFCP PHASE1:Hg19::chr9:131452239..131452285,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:131452239..131452285,+ to FFCP PHASE1:Hg19::chr9:131452239..131452285,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6418 | |EntrezGene=6418 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10760 | |HGNC=10760 | ||
|TSSclassifier=strong | |||
|UniProt=B2REB8,A6NGV1 | |UniProt=B2REB8,A6NGV1 | ||
|association_with_transcript=0bp_to_ENST00000372686,ENST00000372688,NM_001248001,uc011mbj.1_5end | |||
|cluster_id=chr9:131452239..131452285,+ | |||
|description=CAGE_peak_5_at_SET_5end | |||
|id=chr9:131452239..131452285,+ | |||
|ontology_enrichment_celltype=CL:0000133!2.45e-09!59;CL:0000066!3.91e-09!254;CL:0002319!4.03e-09!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;8.48e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,1.76e-09,59;CL:0002319,3.99e-09,25;CL:0000066,8.31e-09,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.77e-32!239;DOID:162!1.24e-30!235;DOID:0050687!5.68e-18!143;DOID:0050686!3.56e-16!137;DOID:305!4.43e-14!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,7.90e-31,239;DOID:162,2.65e-29,235;DOID:0050687,8.25e-18,143;DOID:0050686,2.49e-15,137;DOID:305,4.10e-14,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p5@SET | |||
}} | }} |
Latest revision as of 20:35, 15 September 2015
Short description: | p5@SET |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SET_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000372686, ENST00000372688, NM_001248001, uc011mbj.1_5end |
EntrezGene: | SET |
HGNC: | 10760 |
UniProt: | B2REB8A6NGV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 1.76e-09 | 59 |
neural cell | 3.99e-09 | 25 |
epithelial cell | 8.31e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 7.90e-31 | 239 |
cancer | 2.65e-29 | 235 |
cell type cancer | 8.25e-18 | 143 |
organ system cancer | 2.49e-15 | 137 |
carcinoma | 4.10e-14 | 106 |