FFCP PHASE1:Hg19::chr8:98941240..98941249,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:98941240..98941249,+ | |||
|coexpression_cluster_id=C513 | |||
|description=CAGE_peak_at_chr8:98941240..98941249,+ | |||
|id=chr8:98941240..98941249,+ | |||
|ontology_enrichment_celltype=CL:0002368!2.37e-16!13;CL:0000066!8.22e-12!254;CL:0002202!1.37e-11!9;CL:0002632!1.37e-11!9;CL:0000068!9.08e-10!3;CL:0000069!9.08e-10!3;CL:0002328!9.08e-10!3;CL:0000307!9.08e-10!3;CL:0000377!9.08e-10!3;CL:0002076!1.84e-09!43;CL:0002327!3.44e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002202;1.22e-27;9!CL:0002632;1.22e-27;9!CL:0000307;8.52e-22;3!CL:0002328;3.27e-21;3!CL:0002368;2.88e-19;13!CL:0000575;6.17e-09;2!CL:0002535;6.17e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,1.14e-27,9;CL:0002632,1.14e-27,9;CL:0000068,8.53e-22,3;CL:0000069,8.53e-22,3;CL:0000307,8.53e-22,3;CL:0000377,8.53e-22,3;CL:0002328,2.96e-21,3;CL:0002368,2.75e-19,13;CL:0002535,5.94e-09,2;CL:0000575,6.94e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000377;8.52e-22;3 | |||
|ontology_enrichment_disease=DOID:1749!6.20e-15!14;DOID:305!2.28e-09!106;DOID:0050687!2.81e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.13e-17;14!DOID:3111;1.53e-16;1!DOID:3603;1.53e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.51e-18,14;DOID:3111,8.86e-17,1;DOID:3603,8.86e-17,1 | |||
|ontology_enrichment_uberon=UBERON:0004815!9.08e-10!3;UBERON:0002031!9.08e-10!3;UBERON:0002185!2.13e-07!4;UBERON:0001911!3.44e-07!4;UBERON:0005333!3.44e-07!4;UBERON:0008425!3.44e-07!4;UBERON:0005311!3.44e-07!4;UBERON:0007196!3.89e-07!14;UBERON:0001558!3.89e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;3.27e-21;3!UBERON:0002031;3.27e-21;3!UBERON:0007196;9.48e-17;15!UBERON:0001558;9.48e-17;15!UBERON:0007195;1.53e-16;1!UBERON:0002185;3.88e-13;5!UBERON:0003126;6.69e-10;7!UBERON:0001005;6.69e-10;7!UBERON:0000485;1.18e-09;7!UBERON:0006955;6.17e-09;2!UBERON:0004801;6.17e-09;2!UBERON:0005178;7.47e-08;34!UBERON:0002224;7.47e-08;34!UBERON:0005181;7.56e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,2.96e-21,3;UBERON:0002031,2.96e-21,3;UBERON:0007196,9.11e-17,15;UBERON:0001558,9.11e-17,15;UBERON:0007195,2.25e-16,1;UBERON:0002185,3.65e-13,5;UBERON:0003126,6.69e-10,7;UBERON:0001005,6.69e-10,7;UBERON:0006955,5.94e-09,2;UBERON:0004801,5.94e-09,2;UBERON:0000485,1.02e-07,9;UBERON:0005178,1.49e-07,34;UBERON:0002224,1.49e-07,34;UBERON:0005181,2.42e-07,35;UBERON:0008947,8.86e-07,38;UBERON:0003258,8.86e-07,38 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,1.204823675113,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0.925971025153221,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,3.04498977189684,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0.165284915360978,0,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,2.01090682660736,8.71127878890581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0,0.359473404589307,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685946781900644,1.21882889212564,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0.959293472527256,0,0,0,0.240476460754601,0,0,0,0,0,0,0.248505071130865,0,0.271808412147228,0.418411385249333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0.327609848846413,0,1.90180911022764,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.693153996902029,0,0,0,0,0,0,0,0.327543835020193,0.147856086217045,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0.115233987555779,0,0,0,0,0.556157009460346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709992004383392,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,1.07132363163395,1.76447435857846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00918676322552,0,0,0,0,0,0,0,0.488419611665847,0.213454691755431,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,1.204823675113,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0.925971025153221,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,3.04498977189684,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0.165284915360978,0,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,2.01090682660736,8.71127878890581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0,0.359473404589307,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685946781900644,1.21882889212564,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0.959293472527256,0,0,0,0.240476460754601,0,0,0,0,0,0,0.248505071130865,0,0.271808412147228,0.418411385249333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0.327609848846413,0,1.90180911022764,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.693153996902029,0,0,0,0,0,0,0,0.327543835020193,0.147856086217045,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0.115233987555779,0,0,0,0,0.556157009460346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709992004383392,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,1.07132363163395,1.76447435857846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00918676322552,0,0,0,0,0,0,0,0.488419611665847,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:98941240..98941249,+ | |||
}} | }} |
Latest revision as of 20:52, 31 July 2015
Short description: | p@chr8:98941240..98941249, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:98941240..98941249, + |
Coexpression cluster: | C513_Tracheal_Bronchial_squamous_bronchial_Small_oral_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 1.14e-27 | 9 |
epithelial cell of lower respiratory tract | 1.14e-27 | 9 |
duct epithelial cell | 8.53e-22 | 3 |
branched duct epithelial cell | 8.53e-22 | 3 |
tracheal epithelial cell | 8.53e-22 | 3 |
tracheoblast | 8.53e-22 | 3 |
bronchial epithelial cell | 2.96e-21 | 3 |
respiratory epithelial cell | 2.75e-19 | 13 |
epithelial cell of cervix | 5.94e-09 | 2 |
corneal epithelial cell | 6.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 2.96e-21 | 3 |
epithelium of bronchus | 2.96e-21 | 3 |
tracheobronchial tree | 9.11e-17 | 15 |
lower respiratory tract | 9.11e-17 | 15 |
stroma of bone marrow | 2.25e-16 | 1 |
bronchus | 3.65e-13 | 5 |
trachea | 6.69e-10 | 7 |
respiratory airway | 6.69e-10 | 7 |
uterine epithelium | 5.94e-09 | 2 |
cervix epithelium | 5.94e-09 | 2 |
simple columnar epithelium | 1.02e-07 | 9 |
thoracic cavity element | 1.49e-07 | 34 |
thoracic cavity | 1.49e-07 | 34 |
thoracic segment organ | 2.42e-07 | 35 |
respiratory primordium | 8.86e-07 | 38 |
endoderm of foregut | 8.86e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.51e-18 | 14 |
cystadenocarcinoma | 8.86e-17 | 1 |
mucinous cystadenocarcinoma | 8.86e-17 | 1 |