FFCP PHASE1:Hg19::chr8:73921085..73921125,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:73921085..73921125,+ to FFCP PHASE1:Hg19::chr8:73921085..73921125,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7013 | |EntrezGene=7013 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11728 | |HGNC=11728 | ||
|TSSclassifier=strong | |||
|UniProt=P54274,E5RFJ5 | |UniProt=P54274,E5RFJ5 | ||
|association_with_transcript=0bp_to_ENST00000276602,ENST00000276603,ENST00000518874,NM_003218,NM_017489,uc003xzc.2,uc003xzd.2,uc003xze.2_5end | |||
|cluster_id=chr8:73921085..73921125,+ | |||
|description=CAGE_peak_1_at_TERF1_5end | |||
|id=chr8:73921085..73921125,+ | |||
|ontology_enrichment_celltype=CL:0000838!8.52e-07!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.52e-07,52 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.50e-08;82 | |||
|ontology_enrichment_disease=DOID:162!5.76e-09!235;DOID:14566!2.20e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.76e-09,235;DOID:14566,2.20e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.36e-21!94;UBERON:0001016!1.36e-21!94;UBERON:0001017!1.91e-21!82;UBERON:0007023!7.79e-21!115;UBERON:0005743!2.07e-20!86;UBERON:0001049!3.53e-20!57;UBERON:0005068!3.53e-20!57;UBERON:0006241!3.53e-20!57;UBERON:0007135!3.53e-20!57;UBERON:0000955!1.74e-18!69;UBERON:0006238!1.74e-18!69;UBERON:0003080!1.08e-17!42;UBERON:0002780!1.19e-17!41;UBERON:0001890!1.19e-17!41;UBERON:0006240!1.19e-17!41;UBERON:0002616!9.85e-17!59;UBERON:0003075!1.05e-14!86;UBERON:0007284!1.05e-14!86;UBERON:0002346!2.29e-14!90;UBERON:0002020!2.59e-14!34;UBERON:0003528!2.59e-14!34;UBERON:0001893!7.40e-14!34;UBERON:0002791!1.63e-13!33;UBERON:0001869!2.68e-13!32;UBERON:0000153!3.08e-11!129;UBERON:0007811!3.08e-11!129;UBERON:0003056!6.18e-11!61;UBERON:0004121!1.77e-10!169;UBERON:0000924!1.96e-10!173;UBERON:0006601!1.96e-10!173;UBERON:0002619!2.99e-10!22;UBERON:0000033!3.70e-10!123;UBERON:0000956!5.45e-10!25;UBERON:0000203!5.45e-10!25;UBERON:0001950!4.79e-09!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.30e-13;41!UBERON:0001890;6.30e-13;41!UBERON:0002791;2.68e-12;32!UBERON:0003528;2.79e-12;34!UBERON:0002020;2.79e-12;34!UBERON:0001869;3.92e-12;32!UBERON:0001893;8.05e-12;34!UBERON:0000073;2.70e-11;53!UBERON:0002616;2.70e-11;53!UBERON:0002619;3.20e-10;22!UBERON:0000956;5.50e-10;25!UBERON:0000203;5.50e-10;25!UBERON:0001017;4.81e-09;75!UBERON:0001950;5.13e-09;20!UBERON:0001016;8.02e-09;83!UBERON:0000955;1.16e-08;68!UBERON:0007023;6.04e-07;114!UBERON:0000922;9.38e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.82e-22,89;UBERON:0001017,2.46e-21,81;UBERON:0007023,2.60e-20,114;UBERON:0001049,4.16e-20,56;UBERON:0005068,4.16e-20,56;UBERON:0006241,4.16e-20,56;UBERON:0007135,4.16e-20,56;UBERON:0000073,1.21e-18,53;UBERON:0002616,1.21e-18,53;UBERON:0000955,2.20e-18,68;UBERON:0006238,2.20e-18,68;UBERON:0002780,1.19e-17,41;UBERON:0001890,1.19e-17,41;UBERON:0003080,1.19e-17,41;UBERON:0006240,1.19e-17,41;UBERON:0003528,2.59e-14,34;UBERON:0002020,2.59e-14,34;UBERON:0003075,4.30e-14,82;UBERON:0007284,4.30e-14,82;UBERON:0001893,7.40e-14,34;UBERON:0002346,9.42e-14,86;UBERON:0011216,1.75e-13,223;UBERON:0002791,2.12e-13,32;UBERON:0001869,2.68e-13,32;UBERON:0003056,2.74e-11,61;UBERON:0002619,2.99e-10,22;UBERON:0000956,5.45e-10,25;UBERON:0000203,5.45e-10,25;UBERON:0004121,1.45e-09,171;UBERON:0000924,1.45e-09,171;UBERON:0006601,1.45e-09,171;UBERON:0001950,4.79e-09,20;UBERON:0010371,2.60e-08,104;UBERON:0010314,3.88e-08,132 | |||
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|short_description=p1@TERF1 | |||
}} | }} |
Latest revision as of 01:40, 19 September 2015
Short description: | p1@TERF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TERF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000276602, ENST00000276603, ENST00000518874, NM_003218, NM_017489, uc003xzc.2, uc003xzd.2, uc003xze.2_5end |
EntrezGene: | TERF1 |
HGNC: | 11728 |
UniProt: | P54274E5RFJ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.52e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.76e-09 | 235 |
disease of cellular proliferation | 2.20e-08 | 239 |