FFCP PHASE1:Hg19::chr8:73449625..73449668,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:73449625..73449668,+ to FFCP PHASE1:Hg19::chr8:73449625..73449668,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9312 | |EntrezGene=9312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6232 | |HGNC=6232 | ||
|TSSclassifier=strong | |||
|UniProt=Q92953 | |UniProt=Q92953 | ||
|association_with_transcript=0bp_to_ENST00000523207,NM_004770,uc003xzb.2_5end | |||
|cluster_id=chr8:73449625..73449668,+ | |||
|coexpression_cluster_id=C2014 | |||
|description=CAGE_peak_2_at_KCNB2_5end | |||
|id=chr8:73449625..73449668,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;4.61e-08;2!CL:0000242;4.61e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.82e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0003056;8.08e-11;3!UBERON:0006601;4.30e-09;82!UBERON:0006238;1.47e-07;10!UBERON:0010122;3.08e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;8.15e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.38e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0002780!8.54e-42!41;UBERON:0001890!8.54e-42!41;UBERON:0006240!8.54e-42!41;UBERON:0001049!1.73e-41!57;UBERON:0005068!1.73e-41!57;UBERON:0006241!1.73e-41!57;UBERON:0007135!1.73e-41!57;UBERON:0001017!1.15e-40!82;UBERON:0003080!1.47e-40!42;UBERON:0005743!4.42e-40!86;UBERON:0003056!4.58e-40!61;UBERON:0000073!1.37e-38!94;UBERON:0001016!1.37e-38!94;UBERON:0003075!9.96e-38!86;UBERON:0007284!9.96e-38!86;UBERON:0001869!1.08e-37!32;UBERON:0002020!1.35e-37!34;UBERON:0003528!1.35e-37!34;UBERON:0001893!1.73e-37!34;UBERON:0002346!5.89e-37!90;UBERON:0000955!2.77e-36!69;UBERON:0006238!2.77e-36!69;UBERON:0002791!7.19e-36!33;UBERON:0002616!1.62e-33!59;UBERON:0007023!5.69e-33!115;UBERON:0002619!1.60e-31!22;UBERON:0001950!1.45e-28!20;UBERON:0000153!1.68e-28!129;UBERON:0007811!1.68e-28!129;UBERON:0000956!4.33e-27!25;UBERON:0000203!4.33e-27!25;UBERON:0000033!1.23e-25!123;UBERON:0004121!3.07e-24!169;UBERON:0000924!3.09e-24!173;UBERON:0006601!3.09e-24!173;UBERON:0001871!4.09e-14!7;UBERON:0000064!1.77e-13!219;UBERON:0002420!5.81e-12!9;UBERON:0007245!5.81e-12!9;UBERON:0010009!5.81e-12!9;UBERON:0010011!5.81e-12!9;UBERON:0000454!5.81e-12!9;UBERON:0002308!7.18e-12!9;UBERON:0000125!7.18e-12!9;UBERON:0001872!7.77e-10!5;UBERON:0000025!1.11e-09!194;UBERON:0000475!1.19e-09!365;UBERON:0000349!2.92e-09!5;UBERON:0009663!4.98e-09!7;UBERON:0000483!6.37e-08!309;UBERON:0000369!6.62e-08!4;UBERON:0002435!6.62e-08!4;UBERON:0000204!6.62e-08!4;UBERON:0010082!6.62e-08!4;UBERON:0000200!8.43e-08!6;UBERON:0000922!8.59e-08!612;UBERON:0000119!1.06e-07!312;UBERON:0000062!3.90e-07!511;UBERON:0003296!5.54e-07!4;UBERON:0010133!5.54e-07!4;UBERON:0000488!8.79e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;7.73e-39;32!UBERON:0002791;1.64e-35;32!UBERON:0001893;7.91e-35;34!UBERON:0003528;9.20e-35;34!UBERON:0002020;9.20e-35;34!UBERON:0002619;1.61e-33;22!UBERON:0001950;1.30e-32;20!UBERON:0000956;3.50e-29;25!UBERON:0000203;3.50e-29;25!UBERON:0002780;2.73e-28;41!UBERON:0001890;2.73e-28;41!UBERON:0000955;1.04e-19;68!UBERON:0001017;1.61e-17;75!UBERON:0000073;3.62e-17;53!UBERON:0002616;3.62e-17;53!UBERON:0001016;5.28e-14;83!UBERON:0000369;4.25e-13;4!UBERON:0002435;4.25e-13;4!UBERON:0000204;4.25e-13;4!UBERON:0002420;3.19e-12;9!UBERON:0000125;3.19e-12;9!UBERON:0007245;3.19e-12;9!UBERON:0002308;3.19e-12;9!UBERON:0010009;3.19e-12;9!UBERON:0010011;3.19e-12;9!UBERON:0000454;3.19e-12;9!UBERON:0001871;9.01e-12;6!UBERON:0009663;2.92e-11;7!UBERON:0001872;4.44e-11;5!UBERON:0005383;4.94e-10;3!UBERON:0005382;4.94e-10;3!UBERON:0000200;6.01e-09;6!UBERON:0001873;3.08e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,4.37e-43,32;UBERON:0001893,2.74e-40,34;UBERON:0003528,3.64e-40,34;UBERON:0002020,3.64e-40,34;UBERON:0002791,5.14e-39,32;UBERON:0002780,5.82e-39,41;UBERON:0001890,5.82e-39,41;UBERON:0003080,5.82e-39,41;UBERON:0006240,5.82e-39,41;UBERON:0000955,1.76e-37,68;UBERON:0006238,1.76e-37,68;UBERON:0001016,2.09e-37,89;UBERON:0001017,3.60e-37,81;UBERON:0003056,1.78e-34,61;UBERON:0000073,2.41e-34,53;UBERON:0002616,2.41e-34,53;UBERON:0002619,1.12e-33,22;UBERON:0001950,1.02e-32,20;UBERON:0001049,3.54e-32,56;UBERON:0005068,3.54e-32,56;UBERON:0006241,3.54e-32,56;UBERON:0007135,3.54e-32,56;UBERON:0000956,2.55e-29,25;UBERON:0000203,2.55e-29,25;UBERON:0003075,6.17e-28,82;UBERON:0007284,6.17e-28,82;UBERON:0002346,2.69e-26,86;UBERON:0010371,4.75e-24,104;UBERON:0004121,1.20e-20,171;UBERON:0000924,1.20e-20,171;UBERON:0006601,1.20e-20,171;UBERON:0011216,5.93e-18,223;UBERON:0010314,7.09e-16,132;UBERON:0007023,4.09e-15,114;UBERON:0000369,4.34e-13,4;UBERON:0002435,4.34e-13,4;UBERON:0000204,4.34e-13,4;UBERON:0010082,4.34e-13,4;UBERON:0002420,3.04e-12,9;UBERON:0007245,3.04e-12,9;UBERON:0010009,3.04e-12,9;UBERON:0010011,3.04e-12,9;UBERON:0000454,3.04e-12,9;UBERON:0000125,3.67e-12,9;UBERON:0002308,3.67e-12,9;UBERON:0001871,9.36e-12,6;UBERON:0001872,2.69e-11,5;UBERON:0009663,3.51e-11,7;UBERON:0005383,5.37e-10,3;UBERON:0005382,5.37e-10,3;UBERON:0000200,5.90e-09,6;UBERON:0000025,5.00e-08,192;UBERON:0001873,3.09e-07,2;UBERON:0010122,3.09e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,1.99556457716308,0.614843499851882,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54657762555539,1.00509759200609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.844016498463076,0,0,0,0.19924798825107,0,2.77126022639704,0,0,0,0,0,0,0,0,0,2.90799823828566,1.29875337426592,1.99613798001194,0,0,0,0,0,0,2.75794698593172,0,2.60437492399938,1.77148277162768,1.20596438625408,0,0,0,1.31631238292384,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0.611030144933625,0,0.988511511572023,0.522109747527277,0.269604531922708,1.60515529459758,1.1713222286267,0,0,0,0,1.20990716048664,3.36680037793539,0,2.1045278718029,0.72581733978073,0,0,0,0,0,0.693373365065693,0,0,0,0,0,0,0,0,0.290967049465258,0,3.61569185248852,0,0,3.35547218566157,0,0,0,0,0,0,19.0470447626781,0,0,0,0,0,0,0,1.20084057741958,0.684526894459965,0,0,0,0,0,0,0,0,0,0.470284307407084,0,0,0,0,0,0,0,0.795229689809303,1.63444087333891,0,0.275078873194468,0,0,0,3.15897694621728,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55139547633861,0.79339561045614,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0.327872630709804,0.314108192500469,0,2.3184990331373,1.502291168478,0,0,1.55241007353459,36.5240396231649,0,0,0,0,2.81000943484129,5.65192011582218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,22.1257262355317,0,0,0,0,0.212574920101683,0,0,0,0,10.4074197277111,0,0,2.63339822895484,0,0.798169295285756,2.87162909937057,7.05800749420811,1.1756732918917,2.26065903884592,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,2.16120270778863,3.90539049306924,0.826747186004736,1.96589011601111,8.20462213527329,0,0.496211178389294,0,0,0.535701835878287,0.672567444437648,0.606965604236632,1.13831095675649,0.177404740325278,0,0,0.339848664884159,1.90741043332262,0,0,0,1.41404030924402,0,5.47895232305697,0,0,2.21577286947635,4.10835390505089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,7.95394175771159,1.59160620129095,0,3.27543637912984,6.15666893774403,8.60488208330039,0.231522474323834,0.437119121007915,12.2282497053996,0.245148321753905,15.3189755616057,0.785233868459781,0.297046400327086,0.8453114551668,0,1.12780701575824,0.322289439867886,0,0,0,0,0,0,0,0,2.10773619591836,2.18175345170189,0.5290268405154,0,0,0,0,0,0.506794004045748,0,0,0.0918948995348449,0,0,0,0,0,0.426467963801962,0.476128862927481,0.258355639344024,0.806971285846153,0,0,0,0,0,0.0673520530145875,0.215166616178029,0.99798106963804,0,0,0,0,2.34640942403454,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,1.99556457716308,0.614843499851882,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54657762555539,1.00509759200609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.844016498463076,0,0,0,0.19924798825107,0,2.77126022639704,0,0,0,0,0,0,0,0,0,2.90799823828566,1.29875337426592,1.99613798001194,0,0,0,0,0,0,2.75794698593172,0,2.60437492399938,1.77148277162768,1.20596438625408,0,0,0,1.31631238292384,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0.611030144933625,0,0.988511511572023,0.522109747527277,0.269604531922708,1.60515529459758,1.1713222286267,0,0,0,0,1.20990716048664,3.36680037793539,0,2.1045278718029,0.72581733978073,0,0,0,0,0,0.693373365065693,0,0,0,0,0,0,0,0,0.290967049465258,0,3.61569185248852,0,0,3.35547218566157,0,0,0,0,0,0,19.0470447626781,0,0,0,0,0,0,0,1.20084057741958,0.684526894459965,0,0,0,0,0,0,0,0,0,0.470284307407084,0,0,0,0,0,0,0,0.795229689809303,1.63444087333891,0,0.275078873194468,0,0,0,3.15897694621728,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55139547633861,0.79339561045614,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0.327872630709804,0.314108192500469,0,2.3184990331373,1.502291168478,0,0,1.55241007353459,36.5240396231649,0,0,0,0,2.81000943484129,5.65192011582218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,22.1257262355317,0,0,0,0,0.212574920101683,0,0,0,0,10.4074197277111,0,0,2.63339822895484,0,0.798169295285756,2.87162909937057,7.05800749420811,1.1756732918917,2.26065903884592,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,2.16120270778863,3.90539049306924,0.826747186004736,1.96589011601111,8.20462213527329,0,0.496211178389294,0,0,0.535701835878287,0.672567444437648,0.606965604236632,1.13831095675649,0.177404740325278,0,0,0.339848664884159,1.90741043332262,0,0,0,1.41404030924402,0,5.47895232305697,0,0,2.21577286947635,4.10835390505089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,7.95394175771159,1.59160620129095,0,3.27543637912984,6.15666893774403,8.60488208330039,0.231522474323834,0.437119121007915,12.2282497053996,0.245148321753905,15.3189755616057,0.785233868459781,0.297046400327086,0.8453114551668,0,1.12780701575824,0.322289439867886,0,0,0,0,0,0,0,0,2.10773619591836,2.18175345170189,0.5290268405154,0,0,0,0,0,0.506794004045748,0,0,0.0918948995348449,0,0,0,0,0,0.426467963801962,0.476128862927481,0.258355639344024,0.806971285846153,0,0,0,0,0,0.0673520530145875,0.215166616178029,0.99798106963804,0,0,0,0,2.34640942403454,0,0,0,0.201273793591026,0 | ||
|short_description=p2@KCNB2 | |||
}} | }} |
Latest revision as of 01:34, 19 September 2015
Short description: | p2@KCNB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KCNB2_5end |
Coexpression cluster: | C2014_medulloblastoma_gastrointestinal_neuroblastoma_somatostatinoma_nonsmall_smallcell_small |
Association with transcript: | 0bp_to_ENST00000523207, NM_004770, uc003xzb.2_5end |
EntrezGene: | KCNB2 |
HGNC: | 6232 |
UniProt: | Q92953 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.82e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.38e-09 | 4 |