FFCP PHASE1:Hg19::chr8:50823200..50823219,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:50823200..50823219,+ to FFCP PHASE1:Hg19::chr8:50823200..50823219,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54212 | |EntrezGene=54212 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13740 | |HGNC=13740 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-289bp_to_ENST00000520697_5end | |||
|cluster_id=chr8:50823200..50823219,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_5_at_SNTG1_5end | |||
|id=chr8:50823200..50823219,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.00e-15;2!UBERON:0006601;2.11e-10;82!UBERON:0006222;3.57e-08;1 | |||
|ontology_enrichment_disease=DOID:171!8.04e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.25e-72!57;UBERON:0005068!1.25e-72!57;UBERON:0006241!1.25e-72!57;UBERON:0007135!1.25e-72!57;UBERON:0001869!1.64e-71!32;UBERON:0001893!1.77e-71!34;UBERON:0002780!2.33e-71!41;UBERON:0001890!2.33e-71!41;UBERON:0006240!2.33e-71!41;UBERON:0002020!7.52e-71!34;UBERON:0003528!7.52e-71!34;UBERON:0003080!1.79e-69!42;UBERON:0002791!1.43e-68!33;UBERON:0000073!4.10e-67!94;UBERON:0001016!4.10e-67!94;UBERON:0001017!8.36e-67!82;UBERON:0002616!3.22e-66!59;UBERON:0005743!3.37e-63!86;UBERON:0000955!1.07e-60!69;UBERON:0006238!1.07e-60!69;UBERON:0002619!8.91e-59!22;UBERON:0001950!3.90e-53!20;UBERON:0002346!3.65e-52!90;UBERON:0000956!3.02e-51!25;UBERON:0000203!3.02e-51!25;UBERON:0003075!3.83e-47!86;UBERON:0007284!3.83e-47!86;UBERON:0003056!3.10e-45!61;UBERON:0007023!1.46e-40!115;UBERON:0000924!1.53e-37!173;UBERON:0006601!1.53e-37!173;UBERON:0004121!1.01e-33!169;UBERON:0000033!2.24e-31!123;UBERON:0000153!2.02e-29!129;UBERON:0007811!2.02e-29!129;UBERON:0002420!3.35e-21!9;UBERON:0007245!3.35e-21!9;UBERON:0010009!3.35e-21!9;UBERON:0010011!3.35e-21!9;UBERON:0000454!3.35e-21!9;UBERON:0002308!1.40e-20!9;UBERON:0000125!1.40e-20!9;UBERON:0000200!1.05e-18!6;UBERON:0001871!1.22e-17!7;UBERON:0009663!3.52e-16!7;UBERON:0000025!5.90e-16!194;UBERON:0001872!1.64e-15!5;UBERON:0000349!3.12e-15!5;UBERON:0002021!4.98e-15!5;UBERON:0000369!1.44e-13!4;UBERON:0002435!1.44e-13!4;UBERON:0000204!1.44e-13!4;UBERON:0010082!1.44e-13!4;UBERON:0004111!8.08e-11!241;UBERON:0005383!1.27e-10!3;UBERON:0005382!1.27e-10!3;UBERON:0002771!3.80e-10!3;UBERON:0000483!3.57e-09!309;UBERON:0000119!5.57e-09!312;UBERON:0000064!7.20e-09!219;UBERON:0000477!8.71e-09!286;UBERON:0000988!1.94e-08!3;UBERON:0002298!5.55e-08!8;UBERON:0003076!9.77e-08!15;UBERON:0003057!9.77e-08!15;UBERON:0001873!1.23e-07!2;UBERON:0010122!1.23e-07!2;UBERON:0004733!2.48e-07!12;UBERON:0002028!2.48e-07!12;UBERON:0007277!2.48e-07!12;UBERON:0001870!2.50e-07!2;UBERON:0001954!3.19e-07!2;UBERON:0003022!3.19e-07!2;UBERON:0002421!3.19e-07!2;UBERON:0002600!3.19e-07!2;UBERON:0000923!3.48e-07!604;UBERON:0005291!3.48e-07!604;UBERON:0006598!3.48e-07!604;UBERON:0002532!3.48e-07!604;UBERON:0000475!3.59e-07!365;UBERON:0001875!3.71e-07!2;UBERON:0006514!3.71e-07!2;UBERON:0002050!3.79e-07!605;UBERON:0005423!3.79e-07!605;UBERON:0000922!6.83e-07!612;UBERON:0001876!9.78e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.13e-99;32!UBERON:0002791;8.95e-92;32!UBERON:0002619;2.56e-89;22!UBERON:0001893;4.57e-88;34!UBERON:0003528;2.25e-86;34!UBERON:0002020;2.25e-86;34!UBERON:0000956;1.27e-78;25!UBERON:0000203;1.27e-78;25!UBERON:0001950;4.87e-77;20!UBERON:0002780;6.62e-74;41!UBERON:0001890;6.62e-74;41!UBERON:0000073;2.34e-41;53!UBERON:0002616;2.34e-41;53!UBERON:0000200;7.46e-40;6!UBERON:0001872;2.99e-33;5!UBERON:0000955;5.51e-32;68!UBERON:0000369;1.27e-28;4!UBERON:0002435;1.27e-28;4!UBERON:0000204;1.27e-28;4!UBERON:0001017;8.12e-28;75!UBERON:0009663;4.14e-25;7!UBERON:0005383;5.61e-22;3!UBERON:0005382;5.61e-22;3!UBERON:0002021;5.45e-21;5!UBERON:0001870;6.42e-21;3!UBERON:0002420;1.70e-19;9!UBERON:0000125;1.70e-19;9!UBERON:0007245;1.70e-19;9!UBERON:0002308;1.70e-19;9!UBERON:0010009;1.70e-19;9!UBERON:0010011;1.70e-19;9!UBERON:0000454;1.70e-19;9!UBERON:0001016;1.05e-18;83!UBERON:0001873;3.00e-15;2!UBERON:0002702;7.92e-15;2!UBERON:0001954;1.57e-14;2!UBERON:0003022;1.57e-14;2!UBERON:0002421;1.57e-14;2!UBERON:0002600;1.57e-14;2!UBERON:0002771;2.61e-14;2!UBERON:0000349;6.15e-13;5!UBERON:0007023;1.88e-10;114!UBERON:0001871;4.67e-09;6!UBERON:0001874;1.77e-08;1!UBERON:0001882;2.12e-08;1!UBERON:0005403;2.12e-08;1!UBERON:0007190;3.57e-08;1!UBERON:0011216;7.46e-08;132!UBERON:0002581;7.85e-08;1!UBERON:0002022;7.85e-08;1!UBERON:0010314;3.28e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.85e-112,32;UBERON:0001893,1.29e-105,34;UBERON:0002780,3.82e-103,41;UBERON:0001890,3.82e-103,41;UBERON:0003080,3.82e-103,41;UBERON:0006240,3.82e-103,41;UBERON:0002791,9.67e-103,32;UBERON:0003528,1.23e-96,34;UBERON:0002020,1.23e-96,34;UBERON:0002619,3.94e-89,22;UBERON:0000073,3.03e-79,53;UBERON:0002616,3.03e-79,53;UBERON:0000956,1.86e-78,25;UBERON:0000203,1.86e-78,25;UBERON:0001950,5.17e-77,20;UBERON:0001049,7.69e-75,56;UBERON:0005068,7.69e-75,56;UBERON:0006241,7.69e-75,56;UBERON:0007135,7.69e-75,56;UBERON:0003056,1.91e-68,61;UBERON:0000955,4.38e-65,68;UBERON:0006238,4.38e-65,68;UBERON:0001017,3.54e-54,81;UBERON:0002346,2.02e-51,86;UBERON:0003075,5.46e-50,82;UBERON:0007284,5.46e-50,82;UBERON:0001016,1.99e-48,89;UBERON:0000200,2.72e-40,6;UBERON:0010371,1.47e-38,104;UBERON:0001872,4.81e-33,5;UBERON:0007023,1.46e-29,114;UBERON:0010314,1.82e-29,132;UBERON:0000369,1.23e-28,4;UBERON:0002435,1.23e-28,4;UBERON:0000204,1.23e-28,4;UBERON:0010082,1.23e-28,4;UBERON:0004121,1.99e-25,171;UBERON:0000924,1.99e-25,171;UBERON:0006601,1.99e-25,171;UBERON:0009663,4.05e-25,7;UBERON:0005383,5.62e-22,3;UBERON:0005382,5.62e-22,3;UBERON:0001870,5.43e-21,3;UBERON:0002021,6.07e-21,5;UBERON:0002420,1.67e-19,9;UBERON:0000125,1.67e-19,9;UBERON:0007245,1.67e-19,9;UBERON:0002308,1.67e-19,9;UBERON:0010009,1.67e-19,9;UBERON:0010011,1.67e-19,9;UBERON:0000454,1.67e-19,9;UBERON:0000025,7.66e-19,192;UBERON:0011216,2.41e-18,223;UBERON:0001873,3.00e-15,2;UBERON:0010122,3.00e-15,2;UBERON:0002702,7.93e-15,2;UBERON:0002771,1.80e-14,2;UBERON:0001954,2.53e-14,2;UBERON:0003022,2.53e-14,2;UBERON:0002421,2.53e-14,2;UBERON:0002600,2.53e-14,2;UBERON:0004111,3.91e-14,240;UBERON:0000349,8.00e-13,5;UBERON:0000483,4.75e-10,306;UBERON:0000119,6.63e-10,309;UBERON:0001871,4.18e-09,6;UBERON:0001874,1.77e-08,1;UBERON:0001882,2.04e-08,1;UBERON:0005403,2.04e-08,1;UBERON:0007190,2.90e-08,1;UBERON:0002581,5.05e-08,1;UBERON:0002022,7.10e-08,1 | |||
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|short_description=p5@SNTG1 | |||
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Latest revision as of 10:44, 18 September 2015
Short description: | p5@SNTG1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SNTG1_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -289bp_to_ENST00000520697_5end |
EntrezGene: | SNTG1 |
HGNC: | 13740 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data