FFCP PHASE1:Hg19::chr8:40755333..40755352,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:40755333..40755352,- to FFCP PHASE1:Hg19::chr8:40755333..40755352,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79698 | |EntrezGene=79698 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25844 | |HGNC=25844 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H898,E5RGZ7 | |UniProt=Q9H898,E5RGZ7 | ||
|association_with_transcript=0bp_to_ENST00000297737,ENST00000315769,ENST00000523188,NM_001135731,NM_024645,uc003xnr.2,uc003xns.2_5end | |||
|cluster_id=chr8:40755333..40755352,- | |||
|description=CAGE_peak_1_at_ZMAT4_5end | |||
|id=chr8:40755333..40755352,- | |||
|ontology_enrichment_celltype=CL:0002319!1.58e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;8.10e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,6.20e-09,8;CL:0002319,8.49e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.57e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.22e-44!82;UBERON:0005743!8.37e-43!86;UBERON:0000073!2.13e-42!94;UBERON:0001016!2.13e-42!94;UBERON:0000955!1.71e-35!69;UBERON:0006238!1.71e-35!69;UBERON:0001049!2.35e-35!57;UBERON:0005068!2.35e-35!57;UBERON:0006241!2.35e-35!57;UBERON:0007135!2.35e-35!57;UBERON:0002616!1.44e-32!59;UBERON:0002780!2.29e-29!41;UBERON:0001890!2.29e-29!41;UBERON:0006240!2.29e-29!41;UBERON:0002346!3.63e-28!90;UBERON:0003080!3.63e-28!42;UBERON:0003075!7.41e-27!86;UBERON:0007284!7.41e-27!86;UBERON:0007023!8.12e-25!115;UBERON:0001893!2.29e-24!34;UBERON:0002020!2.80e-24!34;UBERON:0003528!2.80e-24!34;UBERON:0001869!5.43e-24!32;UBERON:0002791!1.56e-23!33;UBERON:0003056!3.83e-21!61;UBERON:0000924!1.30e-20!173;UBERON:0006601!1.30e-20!173;UBERON:0004121!1.94e-19!169;UBERON:0000956!1.31e-18!25;UBERON:0000203!1.31e-18!25;UBERON:0002619!4.08e-18!22;UBERON:0000153!1.12e-17!129;UBERON:0007811!1.12e-17!129;UBERON:0000033!3.02e-17!123;UBERON:0001950!8.22e-17!20;UBERON:0000025!1.17e-11!194;UBERON:0003076!2.41e-08!15;UBERON:0003057!2.41e-08!15;UBERON:0000475!7.89e-08!365;UBERON:0000468!1.45e-07!659;UBERON:0002420!2.85e-07!9;UBERON:0007245!2.85e-07!9;UBERON:0010009!2.85e-07!9;UBERON:0010011!2.85e-07!9;UBERON:0000454!2.85e-07!9;UBERON:0004111!3.77e-07!241;UBERON:0000477!3.98e-07!286;UBERON:0002308!4.12e-07!9;UBERON:0000125!4.12e-07!9;UBERON:0001871!8.75e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.79e-29;32!UBERON:0001893;4.65e-28;34!UBERON:0003528;8.09e-28;34!UBERON:0002020;8.09e-28;34!UBERON:0002780;9.17e-28;41!UBERON:0001890;9.17e-28;41!UBERON:0002791;1.94e-27;32!UBERON:0002619;2.11e-25;22!UBERON:0000956;6.11e-25;25!UBERON:0000203;6.11e-25;25!UBERON:0001950;1.63e-23;20!UBERON:0000073;2.23e-23;53!UBERON:0002616;2.23e-23;53!UBERON:0001017;5.86e-20;75!UBERON:0000955;4.52e-17;68!UBERON:0001016;5.13e-17;83!UBERON:0002420;1.15e-08;9!UBERON:0007245;1.15e-08;9!UBERON:0010009;1.15e-08;9!UBERON:0010011;1.15e-08;9!UBERON:0000454;1.15e-08;9!UBERON:0001894;1.56e-08;7!UBERON:0000200;1.77e-08;6!UBERON:0000125;1.91e-08;9!UBERON:0002308;1.91e-08;9!UBERON:0001871;5.03e-08;6!UBERON:0002298;2.02e-07;6!UBERON:0001872;3.88e-07;5!UBERON:0002021;5.24e-07;5!UBERON:0007023;8.92e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.56e-52,89;UBERON:0001017,1.80e-51,81;UBERON:0001049,4.21e-44,56;UBERON:0005068,4.21e-44,56;UBERON:0006241,4.21e-44,56;UBERON:0007135,4.21e-44,56;UBERON:0000073,1.40e-41,53;UBERON:0002616,1.40e-41,53;UBERON:0000955,1.40e-39,68;UBERON:0006238,1.40e-39,68;UBERON:0002780,3.18e-39,41;UBERON:0001890,3.18e-39,41;UBERON:0003080,3.18e-39,41;UBERON:0006240,3.18e-39,41;UBERON:0001869,1.24e-32,32;UBERON:0001893,4.66e-32,34;UBERON:0003528,6.15e-32,34;UBERON:0002020,6.15e-32,34;UBERON:0002791,4.24e-30,32;UBERON:0002346,1.62e-29,86;UBERON:0003075,5.04e-29,82;UBERON:0007284,5.04e-29,82;UBERON:0003056,2.05e-25,61;UBERON:0002619,2.53e-25,22;UBERON:0000956,6.50e-25,25;UBERON:0000203,6.50e-25,25;UBERON:0001950,1.90e-23,20;UBERON:0004121,5.38e-23,171;UBERON:0000924,5.38e-23,171;UBERON:0006601,5.38e-23,171;UBERON:0010371,1.13e-22,104;UBERON:0010314,2.08e-21,132;UBERON:0007023,5.81e-21,114;UBERON:0011216,3.34e-15,223;UBERON:0000025,1.08e-13,192;UBERON:0002420,1.18e-08,9;UBERON:0007245,1.18e-08,9;UBERON:0010009,1.18e-08,9;UBERON:0010011,1.18e-08,9;UBERON:0000454,1.18e-08,9;UBERON:0001894,1.67e-08,7;UBERON:0006222,1.67e-08,7;UBERON:0000200,1.79e-08,6;UBERON:0000125,1.93e-08,9;UBERON:0002308,1.93e-08,9;UBERON:0001871,5.66e-08,6;UBERON:0004111,1.27e-07,240;UBERON:0002298,1.94e-07,6;UBERON:0001872,3.88e-07,5;UBERON:0003076,4.77e-07,15;UBERON:0003057,4.77e-07,15;UBERON:0002021,5.37e-07,5 | |||
|phase1_expression=1.09007027562334,4.92431204949261,0.140954404095971,0,2.23480547213644,0.872338524100369,0,0,0,1.47440361900905,0,0,0,0,0,0,0,0,0,0.738726348460727,0.612002073732759,0.940364164434263,1.43117993565528,2.73748850145768,0.251085279189606,0,0,0,2.75354993794233,0.383829398097213,3.8704030829019,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0.651083453856419,0.950452044448374,0,0,0,0.236777252044017,0,0,0.267440195783507,0,0,0,2.30152611318355,4.69870898099936,0.50133791063589,1.59331170856906,2.3858578411533,1.94653948121054,0.945348171640679,0.886917589850256,0.43917392846563,7.00738053912763,0,0,0.649094787309367,0.870648686496336,5.7171923023112,0,0.571994910780128,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.662045904066094,2.29469296599051,1.41867352879343,5.04609840128076,1.06748995729705,1.97334038733728,0.311211035399766,0.808264032418128,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0.30648779579902,1.20190447125277,0.680593098960126,0.538168907066586,2.56268866582281,0,0.300091096084402,0.824420233907511,2.57640540045629,0.930584281657949,0.675105328965065,0.68205903612839,1.26216887122057,0.736399189138395,0,0.355009592516614,0.403008392910561,1.69560592310488,0,0,0,9.39197537197884,4.63854189125198,4.18298194330266,7.56725701612204,6.05570042101508,9.48941133597158,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.514703430895577,0,0,0,0,0,0,0,1.15930404975077,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,1.40877494421162,0.207328115540772,2.30591925467138,0.25248486685276,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.775630294546667,0,0.845302752556,0,0,0,0,0,1.28680194292333,0,0,0,0.355391948742546,0,1.20575750823834,1.74306691720059,0.99972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0.179060963239896,0,5.51686128565396,2.80315847317372,2.18183161675572,58.6958581953891,31.2335649258292,3.86644406388848,8.20829700138309,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,1.03473071292505,1.99267679560631,2.02806085395873,0,0,0,2.27444828735176,5.39285502046542,0.106727557803444,0,0,0.30239029332968,1.48864684691266,15.9600452219585,3.92924132206303,0.256278298511402,2.04682899626681,2.57366273829772,1.48418066444991,0,0,0,0,0.116210378459959,0.362578348774867,0.200506470303285,0,0.229628896329213,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0.541892875087706,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0.165018999841176,0,0,1.6068392984416,0.290012154876366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7723022215848,1.06461206063404,0,0,1.5743737541619,0.372158369359667,0,0.571890581771475,0,0,0.318203247925937,0.78494864019923,0.179872457583315,0.274537029736055,0.235624804691373,0.606547444719948,0,2.94880919367287,0,0.487426979262569,0,0,0,0,4.41092274836899,2.65375590096488,2.19225442626881,0,0,2.02910376962704,0.6196469961995,0,0,0.294747123039363,1.78335525740625,0,1.26664581178598,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13929437434833,0,0.411362273086194,0.648473311192717,0,1.58625035258854,0,16.3621575394771,0,0,0,0,0,0,17.0439779417806,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0.890894042497916,0,22.8653958986249,15.3329663887459,0.445234820091624,0,0.422250816255987,0.398495976502139,0,0,3.37486652257111,0,0,0,0,0,0.197286811273867,4.7896618469388,0,33.9266461133326,37.7566159518735,5.98841394003583,0,3.93569999982881,0,0,0,0,5.51589397186343,41.6994597138054,0.173624994933292,69.9735694792933,45.4648573617788,1.52581736317083,2.32216445855572,0.295547618953547,30.9333409987101,0,0,1.15425387755696,0,0.23056390438806,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,6.27527055252064,0.995261931078505,0.442287822516696,0,0,0,0,4.65067817566672,0,32.7970224015475,0,0.19566461893209,0,0,1.20990716048664,4.89716418608784,1.83241080922615,2.1045278718029,0.518440956986236,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0.290967049465258,33.4490720160786,12.4289407429293,0,0,56.9797163602908,1.36885967914362,0,0,0.799238438328521,0,0,0,0,0,0,0,0,0.509991088181609,27.4503060406443,22.815970970972,6.16074205013969,0,0,0,0,3.20824593616357,0.717873024576814,0.599037001496973,0.429226048136571,0,9.06976878570805,0.720599767084807,0,0,0,0,0.688992370603241,0,11.1332156573302,12.3945099561534,11.8957329864114,15.266877462293,14.1249714929923,0,0,45.9874143901247,0,0.472834243795189,2.30800187793992,0,0,0,0,1.32418394073086,0,0,0,0,0,0,18.2315183310401,1.01980882368113,0,0,12.4111638107089,6.34716488364912,1.02652102730598,0,0.106787412567695,0,0.414239055347196,1.9846640872478,0,0,0,0,0,0,0,9.26619167876382,48.7337498981842,47.95632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| ||
|short_description=p1@ZMAT4 | |||
}} | }} |
Latest revision as of 06:01, 18 September 2015
Short description: | p1@ZMAT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZMAT4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000297737, ENST00000315769, ENST00000523188, NM_001135731, NM_024645, uc003xnr.2, uc003xns.2_5end |
EntrezGene: | ZMAT4 |
HGNC: | 25844 |
UniProt: | Q9H898E5RGZ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 6.20e-09 | 8 |
neural cell | 8.49e-08 | 25 |