FFCP PHASE1:Hg19::chr8:24256905..24256914,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:24256905..24256914,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_at_chr8:24256905..24256914,+ | |||
|id=chr8:24256905..24256914,+ | |||
|ontology_enrichment_celltype=CL:0000235!3.84e-33!10;CL:0002194!1.17e-29!63;CL:0000576!1.17e-29!63;CL:0000040!1.17e-29!63;CL:0000559!1.17e-29!63;CL:0002009!1.10e-28!65;CL:0002619!2.48e-28!3;CL:0000839!1.70e-26!70;CL:0000557!4.28e-26!71;CL:0000766!3.04e-24!76;CL:0002087!7.79e-17!119;CL:0002031!4.69e-16!124;CL:0000763!9.82e-16!112;CL:0000049!9.82e-16!112;CL:0000738!6.23e-14!140;CL:0000988!1.34e-11!182;CL:0002032!1.98e-11!165;CL:0000837!1.98e-11!165;CL:0000037!7.39e-11!172;CL:0000566!7.39e-11!172;CL:0002057!2.94e-07!42;CL:0000860!9.61e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000235;7.57e-107;6!CL:0002619;3.81e-25;3!CL:0000473;2.21e-18;39!CL:0000234;2.21e-18;39!CL:0000766;6.08e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.53e-107,6;CL:0002619,4.87e-25,3;CL:0002194,9.40e-24,59;CL:0000576,9.40e-24,59;CL:0000040,9.40e-24,59;CL:0000559,9.40e-24,59;CL:0002009,5.67e-23,61;CL:0000839,3.17e-21,66;CL:0000557,6.61e-21,67;CL:0000766,1.92e-19,72;CL:0000473,4.34e-18,48;CL:0000234,4.34e-18,48;CL:0000763,7.62e-13,108;CL:0000049,7.62e-13,108;CL:0002087,4.93e-12,115;CL:0002031,1.64e-11,120;CL:0000738,4.29e-10,136;CL:0002032,1.97e-08,161;CL:0000837,1.97e-08,161;CL:0000037,4.70e-08,168;CL:0000988,1.30e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.31e-23!80;UBERON:0001474!3.55e-21!86;UBERON:0002390!4.86e-20!102;UBERON:0003061!4.86e-20!102;UBERON:0002193!4.91e-18!112;UBERON:0004765!1.06e-17!101;UBERON:0001434!1.06e-17!101;UBERON:0002405!2.91e-15!115;UBERON:0002204!2.84e-11!167;UBERON:0001154!3.61e-10!1;UBERON:0001153!3.61e-10!1;UBERON:0003081!4.22e-08!216;UBERON:0000160!5.85e-08!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.88e-15;4!UBERON:0002114;2.05e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.09e-18,76;UBERON:0001474,4.86e-17,82;UBERON:0004765,1.70e-15,90;UBERON:0002108,2.02e-15,4;UBERON:0002405,5.52e-15,93;UBERON:0002390,3.36e-14,98;UBERON:0003061,3.36e-14,98;UBERON:0001434,6.59e-14,100;UBERON:0002193,7.62e-13,108;UBERON:0002204,4.17e-08,167;UBERON:0002114,2.05e-07,2 | |||
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|short_description=p@chr8:24256905..24256914,+ | |||
}} | }} |
Latest revision as of 17:15, 31 July 2015
Short description: | p@chr8:24256905..24256914, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:24256905..24256914, + |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.53e-107 | 6 |
adult endothelial progenitor cell | 4.87e-25 | 3 |
monopoietic cell | 9.40e-24 | 59 |
monocyte | 9.40e-24 | 59 |
monoblast | 9.40e-24 | 59 |
promonocyte | 9.40e-24 | 59 |
macrophage dendritic cell progenitor | 5.67e-23 | 61 |
myeloid lineage restricted progenitor cell | 3.17e-21 | 66 |
granulocyte monocyte progenitor cell | 6.61e-21 | 67 |
myeloid leukocyte | 1.92e-19 | 72 |
defensive cell | 4.34e-18 | 48 |
phagocyte | 4.34e-18 | 48 |
myeloid cell | 7.62e-13 | 108 |
common myeloid progenitor | 7.62e-13 | 108 |
nongranular leukocyte | 4.93e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.64e-11 | 120 |
leukocyte | 4.29e-10 | 136 |
hematopoietic oligopotent progenitor cell | 1.97e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.97e-08 | 161 |
hematopoietic stem cell | 4.70e-08 | 168 |
hematopoietic cell | 1.30e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.09e-18 | 76 |
bone element | 4.86e-17 | 82 |
skeletal element | 1.70e-15 | 90 |
small intestine | 2.02e-15 | 4 |
immune system | 5.52e-15 | 93 |
hematopoietic system | 3.36e-14 | 98 |
blood island | 3.36e-14 | 98 |
skeletal system | 6.59e-14 | 100 |
hemolymphoid system | 7.62e-13 | 108 |
musculoskeletal system | 4.17e-08 | 167 |
duodenum | 2.05e-07 | 2 |