FFCP PHASE1:Hg19::chr8:144905532..144905541,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:144905532..144905541,- to FFCP PHASE1:Hg19::chr8:144905532..144905541,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22827 | |EntrezGene=22827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17042 | |HGNC=17042 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-80bp_to_ENST00000524570,uc003yzu.1_5end | |||
|cluster_id=chr8:144905532..144905541,- | |||
|description=CAGE_peak_6_at_PUF60_5end | |||
|id=chr8:144905532..144905541,- | |||
|ontology_enrichment_celltype=CL:0000128!4.61e-13!7;CL:0000126!4.61e-13!7;CL:0000127!4.61e-13!7;CL:0002453!4.61e-13!7;CL:0000149!8.68e-11!4;CL:0000147!5.78e-10!14;CL:0002605!6.24e-09!3;CL:0002586!7.27e-09!3;CL:0002319!8.43e-09!25;CL:0000133!3.59e-08!59;CL:0000095!5.46e-07!17;CL:0000123!5.46e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.83e-40;3!CL:0002586;4.67e-40;3!CL:0000149;3.01e-30;4!CL:0000128;9.04e-18;7!CL:0000126;9.04e-18;7!CL:0000127;9.04e-18;7!CL:0000147;2.39e-15;14!CL:0002319;3.86e-08;25!CL:0002600;7.27e-08;2!CL:0000243;1.18e-07;15!CL:0000125;1.18e-07;15!CL:0000095;6.70e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.31e-40,3;CL:0002586,2.93e-40,3;CL:0000149,2.12e-30,4;CL:0000128,7.84e-18,7;CL:0000126,7.84e-18,7;CL:0000127,7.84e-18,7;CL:0002453,7.84e-18,7;CL:0000147,1.91e-15,14;CL:0002319,3.79e-08,25;CL:0002600,8.60e-08,2;CL:0000243,1.11e-07,15;CL:0000125,1.11e-07,15;CL:0000030,1.11e-07,15;CL:0000339,1.11e-07,15;CL:0000133,1.62e-07,59;CL:0000095,6.37e-07,17;CL:0000123,6.37e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0005425;7.63e-15;1!CL:0000339;1.18e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;7.27e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,9.19e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0005743!1.74e-42!86;UBERON:0000073!1.52e-39!94;UBERON:0001016!1.52e-39!94;UBERON:0001017!1.08e-35!82;UBERON:0001049!1.08e-34!57;UBERON:0005068!1.08e-34!57;UBERON:0006241!1.08e-34!57;UBERON:0007135!1.08e-34!57;UBERON:0000955!1.87e-34!69;UBERON:0006238!1.87e-34!69;UBERON:0002616!5.47e-33!59;UBERON:0003075!1.22e-32!86;UBERON:0007284!1.22e-32!86;UBERON:0002346!1.07e-30!90;UBERON:0003056!5.38e-26!61;UBERON:0000033!7.20e-26!123;UBERON:0004121!6.73e-25!169;UBERON:0000153!4.11e-24!129;UBERON:0007811!4.11e-24!129;UBERON:0000924!5.25e-24!173;UBERON:0006601!5.25e-24!173;UBERON:0002780!8.26e-23!41;UBERON:0001890!8.26e-23!41;UBERON:0006240!8.26e-23!41;UBERON:0003080!3.97e-22!42;UBERON:0007023!7.74e-22!115;UBERON:0001893!9.73e-19!34;UBERON:0002020!1.13e-18!34;UBERON:0003528!1.13e-18!34;UBERON:0002791!2.22e-17!33;UBERON:0004732!1.27e-16!13;UBERON:0001869!1.27e-15!32;UBERON:0004733!1.97e-14!12;UBERON:0002028!1.97e-14!12;UBERON:0007277!1.97e-14!12;UBERON:0003076!4.48e-14!15;UBERON:0003057!4.48e-14!15;UBERON:0002298!1.30e-13!8;UBERON:0002308!1.57e-11!9;UBERON:0000125!1.57e-11!9;UBERON:0000956!3.97e-10!25;UBERON:0000203!3.97e-10!25;UBERON:0002680!6.11e-09!9;UBERON:0001895!6.11e-09!9;UBERON:0010092!6.11e-09!9;UBERON:0001781!7.27e-09!3;UBERON:0001782!7.27e-09!3;UBERON:0005424!7.27e-09!3;UBERON:0000966!8.48e-09!5;UBERON:0005388!8.48e-09!5;UBERON:0001802!8.48e-09!5;UBERON:0001032!1.20e-08!24;UBERON:0004456!1.20e-08!24;UBERON:0002420!1.83e-08!9;UBERON:0007245!1.83e-08!9;UBERON:0010009!1.83e-08!9;UBERON:0010011!1.83e-08!9;UBERON:0000454!1.83e-08!9;UBERON:0000064!2.32e-08!219;UBERON:0002104!2.61e-08!21;UBERON:0009663!5.57e-08!7;UBERON:0000062!6.41e-08!511;UBERON:0007625!6.66e-08!11;UBERON:0000475!6.70e-08!365;UBERON:0001896!9.29e-08!3;UBERON:0005290!9.29e-08!3;UBERON:0010096!9.29e-08!3;UBERON:0000922!1.11e-07!612;UBERON:0000988!1.41e-07!3;UBERON:0006331!1.51e-07!3;UBERON:0000020!2.88e-07!23;UBERON:0000483!4.26e-07!309;UBERON:0000119!6.42e-07!312;UBERON:0000970!6.92e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;4.67e-40;3!UBERON:0001782;4.67e-40;3!UBERON:0007625;4.58e-30;11!UBERON:0000966;2.37e-24;5!UBERON:0005388;2.37e-24;5!UBERON:0001802;2.37e-24;5!UBERON:0002104;1.72e-22;21!UBERON:0001032;1.18e-19;24!UBERON:0004456;1.18e-19;24!UBERON:0000019;1.90e-17;19!UBERON:0000047;1.90e-17;19!UBERON:0004088;1.90e-17;19!UBERON:0010230;1.90e-17;19!UBERON:0000970;1.41e-16;20!UBERON:0001456;8.66e-16;21!UBERON:0005795;7.63e-15;1!UBERON:0000941;7.63e-15;1!UBERON:0001785;7.63e-15;1!UBERON:0002464;7.63e-15;1!UBERON:0004904;7.63e-15;1!UBERON:0001021;7.63e-15;1!UBERON:0010371;1.09e-14;31!UBERON:0000020;2.04e-14;23!UBERON:0003714;4.53e-08;2!UBERON:0005162;4.53e-08;2!UBERON:0000122;4.53e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001781,2.37e-53,4;UBERON:0001782,2.93e-40,3;UBERON:0005424,2.93e-40,3;UBERON:0000966,9.61e-36,6;UBERON:0005388,9.61e-36,6;UBERON:0001802,9.61e-36,6;UBERON:0007625,3.60e-30,11;UBERON:0000019,1.02e-23,20;UBERON:0000047,1.02e-23,20;UBERON:0010312,1.02e-23,20;UBERON:0004088,1.02e-23,20;UBERON:0010230,1.02e-23,20;UBERON:0003072,1.02e-23,20;UBERON:0004128,1.02e-23,20;UBERON:0003071,1.02e-23,20;UBERON:0000970,1.40e-22,21;UBERON:0002104,1.40e-22,21;UBERON:0001456,1.52e-21,22;UBERON:0000020,9.86e-20,24;UBERON:0001032,9.86e-20,24;UBERON:0004456,9.86e-20,24;UBERON:0003056,1.67e-16,61;UBERON:0005085,3.18e-15,31;UBERON:0003075,5.66e-15,82;UBERON:0007284,5.66e-15,82;UBERON:0000941,6.22e-15,1;UBERON:0001785,6.22e-15,1;UBERON:0002464,6.22e-15,1;UBERON:0004904,6.22e-15,1;UBERON:0001021,6.22e-15,1;UBERON:0003902,6.22e-15,1;UBERON:0005425,6.22e-15,1;UBERON:0002346,3.11e-14,86;UBERON:0010371,4.43e-14,104;UBERON:0004121,1.34e-09,171;UBERON:0000924,1.34e-09,171;UBERON:0006601,1.34e-09,171;UBERON:0001444,1.60e-09,49;UBERON:0010314,6.57e-09,132;UBERON:0000033,2.73e-08,56;UBERON:0003714,4.09e-08,2;UBERON:0005162,4.09e-08,2;UBERON:0000122,4.09e-08,2;UBERON:0000153,1.88e-07,62;UBERON:0007811,1.88e-07,62 | |||
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| ||
|short_description=p6@PUF60 | |||
}} | }} |
Latest revision as of 23:19, 16 September 2015
Short description: | p6@PUF60 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PUF60_5end |
Coexpression cluster: | NA |
Association with transcript: | -80bp_to_ENST00000524570, uc003yzu.1_5end |
EntrezGene: | PUF60 |
HGNC: | 17042 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.31e-40 | 3 |
retinal pigment epithelial cell | 2.93e-40 | 3 |
visual pigment cell | 2.12e-30 | 4 |
oligodendrocyte | 7.84e-18 | 7 |
macroglial cell | 7.84e-18 | 7 |
astrocyte | 7.84e-18 | 7 |
oligodendrocyte precursor cell | 7.84e-18 | 7 |
pigment cell | 1.91e-15 | 14 |
neural cell | 3.79e-08 | 25 |
smooth muscle cell of trachea | 8.60e-08 | 2 |
glial cell (sensu Vertebrata) | 1.11e-07 | 15 |
glial cell | 1.11e-07 | 15 |
glioblast | 1.11e-07 | 15 |
glioblast (sensu Vertebrata) | 1.11e-07 | 15 |
neurectodermal cell | 1.62e-07 | 59 |
neuron associated cell | 6.37e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.37e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
melanoma | 9.19e-08 | 2 |