FFCP PHASE1:Hg19::chr8:130798840..130798855,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:130798840..130798855,- to FFCP PHASE1:Hg19::chr8:130798840..130798855,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56169 | |EntrezGene=56169 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7151 | |HGNC=7151 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BYG8 | |UniProt=Q9BYG8 | ||
|association_with_transcript=278bp_to_ENST00000276708,NM_031415,uc003ysr.2_5end | |||
|cluster_id=chr8:130798840..130798855,- | |||
|coexpression_cluster_id=C4728 | |||
|description=CAGE_peak_1_at_GSDMC_5end | |||
|id=chr8:130798840..130798855,- | |||
|ontology_enrichment_celltype=CL:0000066!9.48e-19!254;CL:0002076!5.65e-16!43;CL:0000223!3.31e-12!59;CL:0000076!6.54e-12!62;CL:0002368!6.30e-11!13;CL:0002159!1.17e-09!13;CL:0000622!1.31e-07!5;CL:0002251!1.74e-07!21;CL:0002139!1.79e-07!24;CL:0002202!5.26e-07!9;CL:0002632!5.26e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002159;4.30e-14;14!CL:0002076;9.78e-14;42!CL:0002251;7.17e-12;20!CL:0002368;1.40e-11;13!CL:0000244;5.24e-11;4!CL:0000731;5.24e-11;4!CL:0002202;6.13e-10;9!CL:0002632;6.13e-10;9!CL:0002621;8.74e-10;3!CL:0000622;2.88e-09;5!CL:0000307;1.10e-08;3!CL:0002328;2.77e-08;3!CL:0000154;1.04e-07;6!CL:0000362;1.59e-07;9!CL:0000240;1.61e-07;6!CL:0000311;1.61e-07;6!CL:0000079;1.61e-07;6!CL:0000237;1.61e-07;6!CL:0000317;8.21e-07;2!CL:1000448;8.21e-07;2!CL:0002308;8.21e-07;2!CL:0002140;8.21e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,5.74e-18,42;CL:0000066,8.63e-16,253;CL:0000223,1.85e-14,58;CL:0002159,4.58e-14,14;CL:0002251,8.88e-12,20;CL:0002368,1.52e-11,13;CL:0000076,1.93e-11,63;CL:0000244,6.49e-11,4;CL:0000731,6.49e-11,4;CL:0002202,6.73e-10,9;CL:0002632,6.73e-10,9;CL:0002621,8.90e-10,3;CL:0000622,3.11e-09,5;CL:0000068,1.12e-08,3;CL:0000069,1.12e-08,3;CL:0000307,1.12e-08,3;CL:0000377,1.12e-08,3;CL:0002328,3.16e-08,3;CL:0000154,1.11e-07,6;CL:0000362,1.72e-07,9;CL:0000240,1.74e-07,6;CL:0000311,1.74e-07,6;CL:0000079,1.74e-07,6;CL:0000237,1.74e-07,6;CL:0000036,1.74e-07,6;CL:0000357,1.74e-07,6;CL:0000114,1.74e-07,6;CL:0002077,3.83e-07,34;CL:0000317,8.59e-07,2;CL:1000448,8.59e-07,2;CL:0002308,8.59e-07,2;CL:0002140,8.59e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000377;1.10e-08;3!CL:0000357;1.61e-07;6!CL:0000114;1.61e-07;6!CL:0000223;4.87e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!3.30e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.64e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.43e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.89e-13!169;UBERON:0000925!4.89e-13!169;UBERON:0006595!4.89e-13!169;UBERON:0001004!8.07e-13!72;UBERON:0000166!2.89e-10!21;UBERON:0000161!5.29e-10!35;UBERON:0001007!1.99e-09!155;UBERON:0001555!1.99e-09!155;UBERON:0007026!1.99e-09!155;UBERON:0000467!9.69e-09!625;UBERON:0000480!1.15e-08!626;UBERON:0000065!1.21e-08!53;UBERON:0002050!1.53e-08!605;UBERON:0005423!1.53e-08!605;UBERON:0000922!1.88e-08!612;UBERON:0000468!3.32e-08!659;UBERON:0000923!3.38e-08!604;UBERON:0005291!3.38e-08!604;UBERON:0006598!3.38e-08!604;UBERON:0002532!3.38e-08!604;UBERON:0000077!4.44e-08!130;UBERON:0000165!6.10e-08!28;UBERON:0000930!6.10e-08!28;UBERON:0001041!1.21e-07!98;UBERON:0000365!2.12e-07!5;UBERON:0005178!2.54e-07!34;UBERON:0002224!2.54e-07!34;UBERON:0004921!4.72e-07!129;UBERON:0004185!4.72e-07!129;UBERON:0005181!5.58e-07!35;UBERON:0005911!6.90e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;1.59e-13;12!UBERON:0000365;4.91e-13;5!UBERON:0005910;8.43e-11;6!UBERON:0000165;6.94e-10;28!UBERON:0007196;7.63e-10;15!UBERON:0001558;7.63e-10;15!UBERON:0001949;8.74e-10;3!UBERON:0005178;1.06e-09;34!UBERON:0002224;1.06e-09;34!UBERON:0005911;1.82e-09;36!UBERON:0003126;2.79e-09;7!UBERON:0001005;2.79e-09;7!UBERON:0005181;1.28e-08;35!UBERON:0004807;1.96e-08;22!UBERON:0000161;2.33e-08;19!UBERON:0000166;2.33e-08;19!UBERON:0004815;2.77e-08;3!UBERON:0002031;2.77e-08;3!UBERON:0000344;8.67e-08;20!UBERON:0003729;1.72e-07;13!UBERON:0002419;8.21e-07;2!UBERON:0007771;8.21e-07;2!UBERON:0003297;8.21e-07;2!UBERON:0001821;8.21e-07;2!UBERON:0003487;8.21e-07;2!UBERON:0001820;8.21e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.10e-13,160;UBERON:0000925,1.10e-13,160;UBERON:0006595,1.10e-13,160;UBERON:0001004,4.67e-13,74;UBERON:0000365,8.03e-13,5;UBERON:0000166,7.31e-11,22;UBERON:0005910,1.26e-10,6;UBERON:0001007,3.97e-10,145;UBERON:0001555,3.97e-10,145;UBERON:0007026,3.97e-10,145;UBERON:0005178,5.39e-10,34;UBERON:0002224,5.39e-10,34;UBERON:0007196,8.59e-10,15;UBERON:0001558,8.59e-10,15;UBERON:0001949,8.90e-10,3;UBERON:0005181,1.26e-09,35;UBERON:0000165,1.97e-09,29;UBERON:0000930,1.97e-09,29;UBERON:0003126,3.01e-09,7;UBERON:0001005,3.01e-09,7;UBERON:0000065,1.71e-08,54;UBERON:0003102,1.78e-08,99;UBERON:0000161,2.61e-08,36;UBERON:0004815,3.16e-08,3;UBERON:0002031,3.16e-08,3;UBERON:0001041,5.13e-08,87;UBERON:0000344,9.91e-08,20;UBERON:0000072,1.12e-07,47;UBERON:0003729,1.77e-07,13;UBERON:0000033,1.93e-07,56;UBERON:0000153,1.98e-07,62;UBERON:0007811,1.98e-07,62;UBERON:0002419,8.59e-07,2;UBERON:0007771,8.59e-07,2;UBERON:0003297,8.59e-07,2;UBERON:0001821,8.59e-07,2;UBERON:0003487,8.59e-07,2;UBERON:0001820,8.59e-07,2;UBERON:0005089,8.59e-07,2;UBERON:0005088,8.59e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,1.204823675113,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3015391385772,1.2808035326455,0.709446689665756,0,0,0,0,0,0,0,0,0,0.989553900560148,1.39624560335142,1.70489900213078,0,0,0,1.25624332628372,1.0429658368404,1.52032191293582,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82147644146271,1.11235332835329,0,0,0,0,0,0,1.39133685156694,0,1.04142150482278,0,5.45349267072878,0.825354125820202,0.417989933073621,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0,1.47065232138347,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0.732806975721629,0,0,1.3082821564276,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.4519547011259,12.8190676677692,13.1930113878942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31700342490351,4.49607013030478,9.95236826875145,6.66636805141413,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,9.3733833986777,0.503946384596579,4.96212840348353,0.806026704325635,1.74380363108377,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,1.80455823272956,0.276242966807689,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,6.3169209179579,8.45078319847478,0,0,0.154048617114644,0,0,0,0,0,0,1.32227932288782,0.576570202095319,4.97689578728878,0.708104465988849,0,0,0,0,0.532306030317022,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.633322905892992,0,0,0,2.69421915631434,4.69211592875051,2.17781969722645,0.0941438007767792,2.15252686335615,3.36942951335251,3.10401107475673,2.29723400206959,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0.593929361665277,1.84296421259539,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0.269605053441981,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.508507300585533,9.21911958894952,0,0,0,0,0,0,0,0,0,0,1.67308493134324,1.69290568708354,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17398771359254,0,0,0,0,0,0,0,0,0.330991955875499,0,2.38944859545918,0,0,0.347119476670262,2.15583274311631,10.8824008225503,0.17472666824203,6.87944129886466,0.0967563312890851,0,0.164230914106418,13.5784623083787,0,0.451961481561065,0,0,0.0633107959558787,0.782205530939212,1.28254112402454,0,0,0,0,0,0.14405479798815,0.248505071130865,6.83512700388707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,31.7258801368759,0,5.03152031398899,0,0,0.105600336519406,0,0.767660789277781,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0,0,0,0,0,0,3.52407511158336,0,0.314408610199332,0,0.496166021811951,0,0,19.1502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,1.67855409263333,1.86623178009892,0,0,0,0,0,0,0.619678821295011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30315225373673,7.8874297364322,0.577628330751691,0,0,0,0,0,0,0,5.56824519534329,0.147856086217045,0,0,0,0,0,0,2.97726707033577,0,1.27762427639595,0,0,0,0,0.177404740325278,0,1.54339208493677,0,0,0,0.111231401892069,0.470958557103084,0,0,0,0,0,0,0,0,0,0,2.27937780579341,0.6828739083758,5.53007729451273,0.430227358820278,1.30165200803622,0.937347452350735,0,0.22910686854405,0,0,0.223710863595585,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0.169927114687817,13.7216520250586,6.96145190114634,0,0.535661815816973,1.41157948686277,1.28386186702669,0,0,0.143339583151451,0,0,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,4.90438158372256,0,0.0645889098360061,0.124149428591716,0,0,0,13.0630048738177,1.36893320434112,8.21695046777968,4.2316101181679,1.33064142618405,1.22104902916462,0,0,0,2.34640942403454,0.366724332548599,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,1.204823675113,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3015391385772,1.2808035326455,0.709446689665756,0,0,0,0,0,0,0,0,0,0.989553900560148,1.39624560335142,1.70489900213078,0,0,0,1.25624332628372,1.0429658368404,1.52032191293582,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82147644146271,1.11235332835329,0,0,0,0,0,0,1.39133685156694,0,1.04142150482278,0,5.45349267072878,0.825354125820202,0.417989933073621,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0,1.47065232138347,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0.732806975721629,0,0,1.3082821564276,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.4519547011259,12.8190676677692,13.1930113878942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31700342490351,4.49607013030478,9.95236826875145,6.66636805141413,0,0,0,0,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,9.3733833986777,0.503946384596579,4.96212840348353,0.806026704325635,1.74380363108377,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,1.80455823272956,0.276242966807689,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,6.3169209179579,8.45078319847478,0,0,0.154048617114644,0,0,0,0,0,0,1.32227932288782,0.576570202095319,4.97689578728878,0.708104465988849,0,0,0,0,0.532306030317022,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.633322905892992,0,0,0,2.69421915631434,4.69211592875051,2.17781969722645,0.0941438007767792,2.15252686335615,3.36942951335251,3.10401107475673,2.29723400206959,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0.593929361665277,1.84296421259539,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0.269605053441981,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.508507300585533,9.21911958894952,0,0,0,0,0,0,0,0,0,0,1.67308493134324,1.69290568708354,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17398771359254,0,0,0,0,0,0,0,0,0.330991955875499,0,2.38944859545918,0,0,0.347119476670262,2.15583274311631,10.8824008225503,0.17472666824203,6.87944129886466,0.0967563312890851,0,0.164230914106418,13.5784623083787,0,0.451961481561065,0,0,0.0633107959558787,0.782205530939212,1.28254112402454,0,0,0,0,0,0.14405479798815,0.248505071130865,6.83512700388707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,31.7258801368759,0,5.03152031398899,0,0,0.105600336519406,0,0.767660789277781,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0,0,0,0,0,0,3.52407511158336,0,0.314408610199332,0,0.496166021811951,0,0,19.1502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,1.67855409263333,1.86623178009892,0,0,0,0,0,0,0.619678821295011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30315225373673,7.8874297364322,0.577628330751691,0,0,0,0,0,0,0,5.56824519534329,0.147856086217045,0,0,0,0,0,0,2.97726707033577,0,1.27762427639595,0,0,0,0,0.177404740325278,0,1.54339208493677,0,0,0,0.111231401892069,0.470958557103084,0,0,0,0,0,0,0,0,0,0,2.27937780579341,0.6828739083758,5.53007729451273,0.430227358820278,1.30165200803622,0.937347452350735,0,0.22910686854405,0,0,0.223710863595585,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0.169927114687817,13.7216520250586,6.96145190114634,0,0.535661815816973,1.41157948686277,1.28386186702669,0,0,0.143339583151451,0,0,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,4.90438158372256,0,0.0645889098360061,0.124149428591716,0,0,0,13.0630048738177,1.36893320434112,8.21695046777968,4.2316101181679,1.33064142618405,1.22104902916462,0,0,0,2.34640942403454,0.366724332548599,0.406896178315738,0,0,0 | ||
|short_description=p1@GSDMC | |||
}} | }} |
Latest revision as of 09:02, 16 September 2015
Short description: | p1@GSDMC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GSDMC_5end |
Coexpression cluster: | C4728_immature_Gingival_malignant_epidermoid_esophagus_spleen_Mallassezderived |
Association with transcript: | 278bp_to_ENST00000276708, NM_031415, uc003ysr.2_5end |
EntrezGene: | GSDMC |
HGNC: | 7151 |
UniProt: | Q9BYG8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.43e-11 | 14 |