FFCP PHASE1:Hg19::chr8:126104129..126104139,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:126104129..126104139,+ to FFCP PHASE1:Hg19::chr8:126104129..126104139,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=286053 | |EntrezGene=286053 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26513 | |HGNC=26513 | ||
|TSSclassifier=strong | |||
|UniProt=E5RG00 | |UniProt=E5RG00 | ||
|association_with_transcript=8bp_to_ENST00000518146_5end | |||
|cluster_id=chr8:126104129..126104139,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_NSMCE2_5end | |||
|id=chr8:126104129..126104139,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.70e-15!45;CL:0002057!3.39e-15!42;CL:0000766!4.06e-15!76;CL:0000839!1.08e-14!70;CL:0000738!5.70e-14!140;CL:0002031!9.21e-14!124;CL:0000557!5.09e-13!71;CL:0002194!1.47e-12!63;CL:0000576!1.47e-12!63;CL:0000040!1.47e-12!63;CL:0000559!1.47e-12!63;CL:0002009!2.35e-12!65;CL:0000037!9.62e-12!172;CL:0000566!9.62e-12!172;CL:0002087!1.25e-11!119;CL:0002032!1.43e-11!165;CL:0000837!1.43e-11!165;CL:0000763!1.15e-10!112;CL:0000049!1.15e-10!112;CL:0000988!3.73e-10!182;CL:0000219!1.21e-08!390;CL:0000134!1.03e-07!358;CL:0002320!3.79e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.00e-36;33!CL:0002057;2.00e-36;33!CL:0000473;1.92e-26;39!CL:0000234;1.92e-26;39!CL:0000576;1.87e-21;48!CL:0000766;1.92e-14;69!CL:0000763;1.54e-07;100!CL:0002087;6.86e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.22e-36,42;CL:0002057,2.22e-36,42;CL:0000473,1.15e-32,48;CL:0000234,1.15e-32,48;CL:0000766,5.60e-29,72;CL:0000839,8.33e-27,66;CL:0002009,2.85e-26,61;CL:0002194,1.03e-25,59;CL:0000576,1.03e-25,59;CL:0000040,1.03e-25,59;CL:0000559,1.03e-25,59;CL:0000557,9.25e-25,67;CL:0000763,3.61e-22,108;CL:0000049,3.61e-22,108;CL:0002031,2.96e-18,120;CL:0000738,9.48e-18,136;CL:0002032,3.97e-17,161;CL:0000837,3.97e-17,161;CL:0000037,1.02e-16,168;CL:0000988,6.21e-16,177;CL:0002087,2.36e-15,115;CL:0000219,1.91e-08,386;CL:0000134,2.35e-08,354;CL:0002320,7.19e-08,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.46e-26;42!CL:0000049;5.36e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.59e-12!86;UBERON:0004765!3.35e-12!101;UBERON:0001434!3.35e-12!101;UBERON:0002371!8.83e-11!80;UBERON:0002405!5.41e-08!115;UBERON:0002390!3.24e-07!102;UBERON:0003061!3.24e-07!102;UBERON:0002384!5.79e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.58e-22,82;UBERON:0002371,4.68e-22,76;UBERON:0002405,1.55e-19,93;UBERON:0004765,1.56e-19,90;UBERON:0002390,6.41e-17,98;UBERON:0003061,6.41e-17,98;UBERON:0001434,1.75e-16,100;UBERON:0002193,2.79e-15,108;UBERON:0002384,1.14e-07,371;UBERON:0002204,1.67e-07,167 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0.446961094427288,0,2.53299878168311,0,0.783556884599516,0,0,0,0.263766978228454,0.247532705920093,0.662794751455832,0,0,0,0.487932798790507,0.123121058076788,0.408001382488506,0,0.85870796139317,0.273748850145768,0.376627918784408,0.0764134057479513,0.246301768349837,0.314843125254717,1.57345710739562,1.15148819429164,1.70297735647684,0,0,0,0.46480320348181,0.284338464974843,1.46800219667424,2.21598163412751,1.40381113229099,1.30206522429511,0.895661896959697,0.647787332037959,0.257575567634187,0.872389432677388,0.755751887377619,1.94067248950253,2.09186133215116,6.16751832032739,8.6717783850629,3.16461631554365,3.58624989140741,8.98632473576624,4.13694816883942,12.9096936716765,27.0852973188684,1.50593871634084,10.3704337021981,9.43838634669355,4.59125838556354,6.41858054152187,10.8687311385837,0.329851300186716,3.19141852194611,1.70489900213078,1.45104619314292,3.40431134814684,9.9651559839292,4.77372463987812,6.77927793946262,11.9453864587814,0.605399502633369,6.2607198117886,7.27863491114034,0.211255286311942,0.212604299965044,0.209658645508376,1.12328631146495,0.450530678524519,0.64290234678832,0,0.19891667719909,0,0,1.09227722252426,0.889509253863555,1.28019066769952,0.400395987036012,0.574752439954483,0,0,0,0,0,1.32171328579026,1.68152568894461,0.263384084775077,0.196709770113833,0.393010762749165,0.411202997999018,0.668745981562712,0.651844533267181,0.473447805734733,0,1.22551502573691,0.883817722424512,0.221533894583621,0.270803863765016,0.512365278902701,0.260118695119756,0,0.552700035571697,1.15921234294021,0.444859689486181,0.802622484269139,1.04535523804977,2.15287751125376,0.766440987203842,0.34362744548263,0,0.637130828648193,0.651083453856419,0,0.301150238155546,0.511946444617674,0,1.18388626022008,0.821127996921047,0.604820229674197,0.802320587350522,0.434473211648397,0,0,0.383587685530591,0,0,0.579386075843295,1.5905718941022,0.973269740605272,0.945348171640679,0.443458794925128,0.175669571386252,0.72038491523742,0,0,0.324547393654683,0.348259474598534,0.664789802594326,0.238490624305342,0.571994910780128,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0.258416759169329,1.06729878806013,0.33472061276467,0.402829317109147,0,0,0.367663080345869,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0.949265659568129,0.366403487860815,1.31780417436063,3.87780264148325,0,0.993943903390637,0.379891534993739,1.05927344650575,1.72101972449288,1.06400514659507,1.12135520028461,0,0.49333509683432,0.311211035399766,0.538842688278752,0.817309515567294,0.302714855289863,0,0,0,0,0.298897361103602,0.23486899728753,0.485618833104395,0.280901613404497,0,0.245668634623536,0.206651562351531,2.37600571456411,0,0,0,0.505008341862199,0.125118519871964,0.554128230968366,0.438977620880838,0.612975591598039,0.150238058906597,0.907457465280168,0.717558542755448,0.213557388818567,0,0.900273288253207,0.824420233907511,0.257640540045629,0.18611685633159,0.337552664482532,0.389748020644795,0.757301322732344,0.460249493211497,0.161646056818812,0.710019185033229,0.503760491138201,0.169560592310488,0,0.272746120590835,0.573609190778008,1.09776335516636,0.795178609928912,0.580969714347592,0.310983165046111,0,2.18986415445498,0,0,0,0.464367928031979,0,0.946454400318751,0.674338760312407,0.241011029883482,0.55146986366197,1.08939722046203,0.71181185733329,0.269662616320329,0.196221465125346,1.53898862778556,0,0,0,1.47008711385542,0,0.982827216677626,0,0.882926198829301,0.737930631258681,0.514703430895577,0.219500570817251,0,0.201057944823262,0.277765335475589,0.325808305310325,0,0,0.927443239800615,0.821860859650752,0.866198686566443,0,0.190254152234598,0.790204397959275,2.57545848628462,0.492434012174795,0.468008530278475,0.445893486866185,0.93733833986777,0,0.850650583454319,0.358234090811393,0.581267877027924,0,2.46331618947972,0.792435906119034,0.621984346622316,0.576479813667846,0.88369703398466,0.761974731506028,0.381988425558278,0,0,0.616964956219941,0.901029173531752,0.285826432630578,0.112131084345361,0.43596006883328,0.36669142910475,0.775630294546667,0,0.845302752556,0.797814349754612,0,0,0,0,0.57191197463259,0,2.46972101034231,0.65147236858747,0.710783897485092,0,0.301439377059586,0.871533458600294,0.399891964728228,1.2162378064119,0,0,1.19812427745791,0,1.42636905040718,0.289562613335158,1.02738161275192,0.716243852959582,1.68127715990291,0.394061520403854,0.646882724578552,0.513372145118994,0.254094624222463,0,0,0.502548796003046,1.91381625495949,0.749007023947182,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0.892144943985809,0,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.553107505625109,0.260650843404249,0.195801157462741,0,0.206768026122887,0.647142602455851,0.213455115606889,0,0,0.907170879989041,0.496215615637554,1.2276957863045,0.561320188866147,0.640695746278505,0.511707249066704,0.482561763430822,1.48418066444991,0.308419387605311,0.355123450626254,0.246381468041427,0.519254429183621,0.23242075691991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| ||
|short_description=p3@NSMCE2 | |||
}} | }} |
Latest revision as of 02:53, 16 September 2015
Short description: | p3@NSMCE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NSMCE2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 8bp_to_ENST00000518146_5end |
EntrezGene: | NSMCE2 |
HGNC: | 26513 |
UniProt: | E5RG00 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.22e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.22e-36 | 42 |
defensive cell | 1.15e-32 | 48 |
phagocyte | 1.15e-32 | 48 |
myeloid leukocyte | 5.60e-29 | 72 |
myeloid lineage restricted progenitor cell | 8.33e-27 | 66 |
macrophage dendritic cell progenitor | 2.85e-26 | 61 |
monopoietic cell | 1.03e-25 | 59 |
monocyte | 1.03e-25 | 59 |
monoblast | 1.03e-25 | 59 |
promonocyte | 1.03e-25 | 59 |
granulocyte monocyte progenitor cell | 9.25e-25 | 67 |
myeloid cell | 3.61e-22 | 108 |
common myeloid progenitor | 3.61e-22 | 108 |
hematopoietic lineage restricted progenitor cell | 2.96e-18 | 120 |
leukocyte | 9.48e-18 | 136 |
hematopoietic oligopotent progenitor cell | 3.97e-17 | 161 |
hematopoietic multipotent progenitor cell | 3.97e-17 | 161 |
hematopoietic stem cell | 1.02e-16 | 168 |
hematopoietic cell | 6.21e-16 | 177 |
nongranular leukocyte | 2.36e-15 | 115 |
motile cell | 1.91e-08 | 386 |
mesenchymal cell | 2.35e-08 | 354 |
connective tissue cell | 7.19e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
bone element | 1.58e-22 | 82 |
bone marrow | 4.68e-22 | 76 |
immune system | 1.55e-19 | 93 |
skeletal element | 1.56e-19 | 90 |
hematopoietic system | 6.41e-17 | 98 |
blood island | 6.41e-17 | 98 |
skeletal system | 1.75e-16 | 100 |
hemolymphoid system | 2.79e-15 | 108 |
connective tissue | 1.14e-07 | 371 |
musculoskeletal system | 1.67e-07 | 167 |