FFCP PHASE1:Hg19::chr8:122653259..122653278,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=34340 | |HGNC=34340 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-397bp_to_ENST00000520043_5end | |||
|cluster_id=chr8:122653259..122653278,+ | |||
|coexpression_cluster_id=C2007 | |||
|description=CAGE_peak_4_at_HAS2-AS1_5end | |||
|id=chr8:122653259..122653278,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.24e-20!180;CL:0002620!2.93e-19!23;CL:0000057!1.26e-15!75;CL:0000515!9.24e-10!4;CL:0000048!7.31e-09!430;CL:0000723!1.68e-08!436;CL:0000034!4.91e-08!444;CL:0000188!1.30e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000056;1.03e-44;4!CL:0002582;1.95e-27;3!CL:0000515;3.56e-27;3!CL:0000680;6.29e-26;7!CL:0000228;5.16e-21;1!CL:0002372;5.16e-21;1!CL:0002321;1.71e-12;15!CL:0002334;1.35e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,6.58e-45,4;CL:0002582,3.11e-27,3;CL:0000228,5.16e-21,1;CL:0002372,5.16e-21,1;CL:0002334,1.52e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000515;1.03e-44;4 | |||
|ontology_enrichment_disease=DOID:17!5.04e-10!5;DOID:450!5.04e-10!5;DOID:66!5.04e-10!5;DOID:423!5.04e-10!5;DOID:0080000!5.04e-10!5;DOID:11722!5.04e-10!5 | |||
|ontology_enrichment_disease_v019=DOID:2513;5.16e-21;1!DOID:3451;3.34e-11;2!DOID:4159;3.34e-11;2!DOID:0060122;3.34e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,2.82e-21,1;DOID:3451,2.47e-11,2;DOID:4159,2.47e-11,2;DOID:0060122,2.47e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0002199!5.24e-12!45;UBERON:0002416!5.24e-12!45;UBERON:0002097!7.79e-11!40;UBERON:0003102!4.35e-07!95;UBERON:0000914!7.73e-07!83;UBERON:0002329!7.73e-07!83;UBERON:0003077!7.73e-07!83;UBERON:0003059!7.73e-07!83;UBERON:0007282!7.73e-07!83;UBERON:0009618!7.73e-07!83;UBERON:0007285!7.73e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;9.39e-12;16!UBERON:0002036;9.39e-12;16 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@HAS2-AS1 | |||
}} | }} |
Latest revision as of 23:06, 15 September 2015
Short description: | p4@HAS2-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HAS2-AS1_5end |
Coexpression cluster: | C2007_liposarcoma_Fibroblast_Myoblast_Preadipocyte_mesenchymal_basal_Smooth |
Association with transcript: | -397bp_to_ENST00000520043_5end |
EntrezGene: | NA |
HGNC: | 34340 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 6.58e-45 | 4 |
visceral preadipocyte | 3.11e-27 | 3 |
multinucleate cell | 5.16e-21 | 1 |
myotube | 5.16e-21 | 1 |
preadipocyte | 1.52e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.82e-21 | 1 |
skin carcinoma | 2.47e-11 | 2 |
skin cancer | 2.47e-11 | 2 |
integumentary system cancer | 2.47e-11 | 2 |