FFCP PHASE1:Hg19::chr8:117886732..117886748,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:117886732..117886748,- to FFCP PHASE1:Hg19::chr8:117886732..117886748,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5885 | |EntrezGene=5885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9811 | |HGNC=9811 | ||
|TSSclassifier=strong | |||
|UniProt=E5RFV8 | |UniProt=E5RFV8 | ||
|association_with_transcript=18bp_to_ENST00000517485_5end | |||
|cluster_id=chr8:117886732..117886748,- | |||
|description=CAGE_peak_6_at_RAD21_5end | |||
|id=chr8:117886732..117886748,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.24e-10;29 | |||
|ontology_enrichment_disease=DOID:162!2.06e-12!235;DOID:14566!8.45e-12!239;DOID:2531!1.65e-10!51;DOID:0060083!1.65e-10!51;DOID:0050686!1.58e-07!137;DOID:1240!4.03e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1240;8.23e-09;39!DOID:2531;1.53e-07;51!DOID:0060083;1.53e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.26e-12,235;DOID:14566,9.36e-12,239;DOID:1240,5.51e-11,39;DOID:2531,1.41e-10,51;DOID:0060083,1.41e-10,51;DOID:305,7.71e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.59e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.04e-27;9!UBERON:0001557;8.04e-27;9!UBERON:0000072;1.15e-07;37!UBERON:0005406;3.37e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.22e-27,9;UBERON:0001557,7.00e-18,19;UBERON:0000072,2.53e-08,47;UBERON:0008947,1.09e-07,38;UBERON:0003258,1.09e-07,38;UBERON:0005406,1.89e-07,2;UBERON:0000065,6.92e-07,54 | |||
|phase1_expression=0.54503513781167,0.428201047781966,2.53717927372748,0,0.893922188854576,1.74467704820074,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0.123121058076788,0.408001382488506,0,0,0.547497700291537,0.251085279189606,0.152826811495903,0.410502947249729,0.157421562627358,0.393364276848904,0,0,0,0,0,0.46480320348181,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.526768169550154,0,0,0,0,0,0,0,1.55974639639243,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0.289803085735052,0.14828656316206,0.267540828089713,0,0.339928028092699,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.44575660953827,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0.371457501329565,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0.549605231791222,0,0,0,0,0.12663051166458,0,0,2.12801029319014,0,0,0,0,0.269421344139376,0.653847612453835,0,0,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0.323745888736263,0.702254033511242,0.204154171254893,0.122834317311768,0,0,0,0.910161361938026,0,0,0.375355559615893,0.277064115484183,0,0,0.751190294532984,0.226864366320042,0.538168907066586,0,0,0.600182192168805,0.206105058476878,0,0,1.0126579934476,1.75386609290158,0.504867548488229,0.184099797284599,0.161646056818812,0,0.503760491138201,0.67824236924195,0,0,0,0,0.265059536642971,0,0.207322110030741,0,0,0,0,0,0,0,2.9576700009961,2.69735504124963,3.13314338848527,1.65440959098591,1.52515610864684,1.42362371466658,2.15730093056263,1.96221465125346,2.30848294167834,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0.982827216677626,0.590789906681404,3.97316789473185,0.491953754172454,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.34779121492523,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0.383382679165211,4.92663237895944,1.76096868026452,0.621984346622316,0.720599767084807,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0.901029173531752,0,0.224262168690721,0.87192013766656,0.51336800074665,0,0,0,0,0,0.257207374262142,1.41849132023278,0.532844358032199,0,0.542621605391443,1.64648067356154,0,0,0,0,0,0.299918973546171,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0.716243852959582,4.25923547175404,0,0,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0.35142424497814,0,0,0,0,0.184369168541703,0.260650843404249,0.391602314925481,0.343143423810856,0,0,0.106727557803444,0,0,0,0.992431231275107,0.153461973288062,0,2.43464383585832,0.511707249066704,0.965123526861645,2.96836132889982,0.154209693802656,0.177561725313127,0.164254312027618,0.519254429183621,0.232420756919918,0,0,0,0.574072240823034,0.364182336013434,0,0,0,0,0,0,1.13733384070897,0,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0.103041011647722,1.09883357782012,1.73269949833235,0,0,1.6068392984416,0,0.154048617114644,0.15350367472613,0.137836572484531,0.214840489736547,0,0.170453254832202,0.712256285173899,0.165284915360978,0.384380134730212,0,0,0.464845549297286,0.31481234683064,0,0.616067160352178,0,0,0,0,0.372158369359667,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0.353437207037059,0.202182481573316,0,0,0,0.487426979262569,0,0.272999822815972,0.141405431953713,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0.281695602532241,0.286822704408103,0.392996164052485,0,0,0,0.658589785919804,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0.427296284509893,0,0.245040215981032,1.85803175125719,0.577076851905779,7.46989355158348,4.46393563640703,3.79200805722352,0,0.635020748171649,0,0,1.14117339516596,0.313359791546046,2.50634477090067,0.169291777801603,0.642352300414798,0,0.425846237690326,0,0,0.894704431569664,0.500547425135725,0.390776190804081,0,0,0,1.33228787199128,1.4098700508785,0.748562161632879,0,0,2.89752799121444,0.852408440419239,0,0.296964680832639,0,0,0,0,0.824019371133798,6.3337622438398,0.19924798825107,0.552567831062295,1.76352923497993,0.306806047506464,0,0,0.269605053441981,0,1.53471711068062,0.0986434056369336,0,3.33410970433911,0,0,0,0.260427761085233,0.174919999992391,0,0.227586896570999,0,0.709163045303809,0,0.291604613383254,1.04174996959975,0,0.241192877250816,0,0.774054819518572,0.295547618953547,0,0.32681539055697,0,0,0,0,0,0.108647371922008,0,0,0.533034776018635,4.08773192782946,3.61054589708557,0.664846727600626,0,0,0,0.189753732724185,0.794682894901893,0.421996129056054,0.163232808159148,0.282706142867882,0,0,0.176915129006678,0,0,0.247127877893006,0.730953646538188,0,0,0,0.729819156862664,0,0.485560759068186,0.394584402849391,2.41981432097328,0,0.063186579628488,0.45097025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| ||
|short_description=p6@RAD21 | |||
}} | }} |
Latest revision as of 19:09, 15 September 2015
Short description: | p6@RAD21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RAD21_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_ENST00000517485_5end |
EntrezGene: | RAD21 |
HGNC: | 9811 |
UniProt: | E5RFV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 4.22e-27 | 9 |
upper respiratory tract | 7.00e-18 | 19 |
segment of respiratory tract | 2.53e-08 | 47 |
respiratory primordium | 1.09e-07 | 38 |
endoderm of foregut | 1.09e-07 | 38 |
perirenal fat | 1.89e-07 | 2 |
respiratory tract | 6.92e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.26e-12 | 235 |
disease of cellular proliferation | 9.36e-12 | 239 |
leukemia | 5.51e-11 | 39 |
hematologic cancer | 1.41e-10 | 51 |
immune system cancer | 1.41e-10 | 51 |
carcinoma | 7.71e-07 | 106 |