FFCP PHASE1:Hg19::chr8:11534521..11534533,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2626 | |EntrezGene=2626 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4173 | |HGNC=4173 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=52bp_to_ENST00000532977_5end | |||
|cluster_id=chr8:11534521..11534533,+ | |||
|description=CAGE_peak_4_at_GATA4_5end | |||
|id=chr8:11534521..11534533,+ | |||
|ontology_enrichment_celltype=CL:0002494!2.79e-32!16;CL:0002548!2.14e-12!6;CL:0000569!6.78e-11!4;CL:0000011!6.78e-11!4;CL:0000746!5.12e-10!3;CL:0000513!5.12e-10!3;CL:0000174!4.14e-09!3;CL:0000737!1.36e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000746;8.82e-23;3!CL:0000737;3.04e-17;4!CL:0002494;2.17e-11;16!CL:0000632;1.45e-10;3!CL:0000511;4.88e-09;1!CL:0002625;4.88e-09;1!CL:0002174;4.88e-09;1!CL:0000216;4.88e-09;1!CL:0000501;4.88e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.28e-22,3;CL:0000513,1.28e-22,3;CL:0000737,4.01e-17,4;CL:0002494,2.40e-11,16;CL:0000632,1.69e-10,3;CL:0002174,4.89e-09,1;CL:0000501,4.89e-09,1;CL:0000511,5.28e-09,1;CL:0002625,5.28e-09,1;CL:0000216,5.28e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000513;8.82e-23;3!UBERON:0004140;3.06e-09;1!UBERON:0010227;7.45e-09;1!UBERON:0010226;1.53e-08;1!UBERON:0005062;1.56e-08;4!UBERON:0007284;1.56e-08;4!UBERON:0009117;1.53e-07;10!UBERON:0005564;1.53e-07;10 | |||
|ontology_enrichment_disease=DOID:114!2.36e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:114;5.41e-16;2!DOID:178;1.53e-08;1!DOID:326;1.53e-08;1!DOID:3978;1.53e-08;1!DOID:3394;1.53e-08;1!DOID:5844;1.53e-08;1!DOID:3571;1.53e-08;1!DOID:1287;1.92e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.41e-16,2;DOID:178,1.53e-08,1;DOID:326,1.53e-08,1;DOID:3978,1.53e-08,1;DOID:3394,1.53e-08,1;DOID:5844,1.53e-08,1;DOID:1287,1.92e-08,4;DOID:3571,2.22e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.18e-57!27;UBERON:0000948!4.05e-49!24;UBERON:0005498!4.05e-49!24;UBERON:0004140!4.05e-49!24;UBERON:0009881!4.05e-49!24;UBERON:0004141!4.05e-49!24;UBERON:0003084!4.05e-49!24;UBERON:0007005!4.05e-49!24;UBERON:0004139!4.05e-49!24;UBERON:0004291!4.05e-49!24;UBERON:0003103!7.08e-22!69;UBERON:0004872!1.09e-16!84;UBERON:0001048!3.59e-13!168;UBERON:0003914!5.83e-12!118;UBERON:0001009!7.32e-12!113;UBERON:0003978!4.97e-10!3;UBERON:0009751!4.97e-10!3;UBERON:0000946!4.97e-10!3;UBERON:0002523!4.97e-10!3;UBERON:0005983!4.97e-10!3;UBERON:0002165!4.97e-10!3;UBERON:0002062!4.97e-10!3;UBERON:0007280!4.97e-10!3;UBERON:0004151!6.50e-10!3;UBERON:0000991!7.88e-10!21;UBERON:0009196!7.88e-10!21;UBERON:0009117!7.88e-10!21;UBERON:0005564!7.88e-10!21;UBERON:0004176!2.66e-09!22;UBERON:0004535!4.77e-09!110;UBERON:0000992!2.68e-07!13;UBERON:0002133!3.60e-07!2;UBERON:0002081!4.05e-07!2;UBERON:0002342!7.76e-07!14;UBERON:0005062!7.76e-07!14;UBERON:0002119!8.28e-07!4;UBERON:0004531!8.28e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;8.03e-48;25!UBERON:0000948;3.97e-32;22!UBERON:0003978;4.32e-11;3!UBERON:0000946;4.32e-11;3!UBERON:0004151;9.12e-11;3!UBERON:0000473;2.74e-09;8!UBERON:0002135;4.88e-09;1!UBERON:0001136;4.88e-09;1!UBERON:0001343;4.88e-09;1!UBERON:0004910;4.88e-09;1!UBERON:0004813;4.88e-09;1!UBERON:0002079;7.45e-09;1!UBERON:0002146;7.45e-09;1!UBERON:0005623;7.45e-09;1!UBERON:0002084;1.53e-08;1!UBERON:0002082;1.53e-08;1!UBERON:0003103;1.85e-08;61!UBERON:0003135;7.13e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.11e-44,27;UBERON:0000948,2.23e-29,24;UBERON:0005498,2.23e-29,24;UBERON:0004140,2.23e-29,24;UBERON:0009881,2.23e-29,24;UBERON:0004141,2.23e-29,24;UBERON:0003084,2.23e-29,24;UBERON:0007005,2.23e-29,24;UBERON:0004139,2.23e-29,24;UBERON:0004291,2.23e-29,24;UBERON:0003103,3.79e-16,68;UBERON:0003978,4.00e-11,3;UBERON:0009751,4.00e-11,3;UBERON:0000946,4.00e-11,3;UBERON:0002523,4.00e-11,3;UBERON:0005983,4.00e-11,3;UBERON:0002165,4.00e-11,3;UBERON:0002062,4.00e-11,3;UBERON:0007280,4.00e-11,3;UBERON:0004151,6.29e-11,3;UBERON:0001048,3.04e-10,160;UBERON:0000473,2.78e-09,8;UBERON:0002135,4.52e-09,1;UBERON:0001136,5.28e-09,1;UBERON:0001343,5.28e-09,1;UBERON:0004910,5.28e-09,1;UBERON:0005154,5.28e-09,1;UBERON:0005295,5.28e-09,1;UBERON:0004813,5.28e-09,1;UBERON:0005297,5.28e-09,1;UBERON:0005294,5.28e-09,1;UBERON:0010141,5.28e-09,1;UBERON:0005891,5.28e-09,1;UBERON:0004872,5.58e-09,83;UBERON:0002079,6.16e-09,1;UBERON:0001009,7.15e-09,112;UBERON:0002146,7.18e-09,1;UBERON:0005623,7.18e-09,1;UBERON:0002084,1.05e-08,1;UBERON:0002082,1.05e-08,1;UBERON:0010226,1.05e-08,1;UBERON:0003914,2.85e-08,117;UBERON:0003135,7.21e-07,11 | |||
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| ||
|short_description=p4@GATA4 | |||
}} | }} |
Latest revision as of 05:56, 25 September 2015
Short description: | p4@GATA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GATA4_5end |
Coexpression cluster: | NA |
Association with transcript: | 52bp_to_ENST00000532977_5end |
EntrezGene: | GATA4 |
HGNC: | 4173 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.28e-22 | 3 |
cardiac muscle myoblast | 1.28e-22 | 3 |
striated muscle cell | 4.01e-17 | 4 |
cardiocyte | 2.40e-11 | 16 |
hepatic stellate cell | 1.69e-10 | 3 |
follicular cell of ovary | 4.89e-09 | 1 |
granulosa cell | 4.89e-09 | 1 |
androgen binding protein secreting cell | 5.28e-09 | 1 |
seminiferous tubule epithelial cell | 5.28e-09 | 1 |
Sertoli cell | 5.28e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.41e-16 | 2 |
vascular disease | 1.53e-08 | 1 |
ischemia | 1.53e-08 | 1 |
extrinsic cardiomyopathy | 1.53e-08 | 1 |
myocardial ischemia | 1.53e-08 | 1 |
myocardial infarction | 1.53e-08 | 1 |
cardiovascular system disease | 1.92e-08 | 4 |
liver cancer | 2.22e-08 | 1 |