FFCP PHASE1:Hg19::chr8:104383700..104383709,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:104383700..104383709,+ to FFCP PHASE1:Hg19::chr8:104383700..104383709,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=115908 | |EntrezGene=115908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18831 | |HGNC=18831 | ||
|TSSclassifier=strong | |||
|UniProt=Q96CG8 | |UniProt=Q96CG8 | ||
|association_with_transcript=-33bp_to_ENST00000330295_5end | |||
|cluster_id=chr8:104383700..104383709,+ | |||
|coexpression_cluster_id=C4714 | |||
|description=CAGE_peak_4_at_CTHRC1_5end | |||
|id=chr8:104383700..104383709,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.17e-30!180;CL:0000057!4.99e-19!75;CL:0000183!4.06e-16!59;CL:0002371!2.08e-14!591;CL:0000680!2.78e-14!57;CL:0000056!2.78e-14!57;CL:0000355!2.78e-14!57;CL:0000187!1.47e-13!54;CL:0000048!6.64e-13!430;CL:0000723!3.92e-12!436;CL:0000548!1.32e-11!679;CL:0000004!1.32e-11!679;CL:0000255!1.32e-11!679;CL:0000393!2.20e-11!60;CL:0000211!2.20e-11!60;CL:0000144!2.39e-11!625;CL:0000012!4.09e-11!682;CL:0000034!4.45e-11!444;CL:0000192!2.53e-10!42;CL:0000514!2.53e-10!42;CL:0000222!2.71e-10!119;CL:0002334!1.19e-08!12;CL:0000359!2.25e-07!32;CL:0002570!5.50e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000134;6.08e-13;55!CL:0000048;1.24e-12;58!CL:0002334;3.89e-12;12!CL:0000723;1.36e-11;61!CL:0002570;1.04e-09;8!CL:0000034;2.89e-08;69!CL:0002320;1.20e-07;188!CL:0000349;3.12e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.81e-17,427;CL:0000723,1.84e-16,433;CL:0000034,2.06e-15,441;CL:0000057,5.46e-15,76;CL:0002334,4.32e-12,12;CL:0002570,1.26e-09,8;CL:0002320,1.55e-09,361;CL:0000192,7.54e-09,43;CL:0000514,7.54e-09,43;CL:0000187,9.04e-09,55;CL:0000680,1.23e-08,58;CL:0000056,1.23e-08,58;CL:0000355,1.23e-08,58;CL:0000136,3.14e-08,15;CL:0000134,3.95e-08,354;CL:0000222,7.20e-08,121;CL:0000349,3.54e-07,19;CL:0000393,4.16e-07,61;CL:0000211,4.16e-07,61;CL:0000219,9.63e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.92e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.49e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004290!8.21e-14!70;UBERON:0005256!1.08e-13!143;UBERON:0000914!1.78e-13!83;UBERON:0002329!1.78e-13!83;UBERON:0003077!1.78e-13!83;UBERON:0003059!1.78e-13!83;UBERON:0007282!1.78e-13!83;UBERON:0009618!1.78e-13!83;UBERON:0007285!1.78e-13!83;UBERON:0001134!6.63e-13!61;UBERON:0002036!6.63e-13!61;UBERON:0003082!6.63e-13!61;UBERON:0002049!6.79e-13!79;UBERON:0007798!6.79e-13!79;UBERON:0002385!7.10e-13!63;UBERON:0001015!7.10e-13!63;UBERON:0000383!7.10e-13!63;UBERON:0000486!6.38e-11!82;UBERON:0003914!1.62e-10!118;UBERON:0004535!2.04e-10!110;UBERON:0002100!2.22e-10!216;UBERON:0001009!4.13e-10!113;UBERON:0001013!7.53e-10!14;UBERON:0000055!1.10e-09!69;UBERON:0000475!1.48e-09!365;UBERON:0000490!2.31e-09!138;UBERON:0004872!2.91e-09!84;UBERON:0002199!1.00e-07!45;UBERON:0002416!1.00e-07!45;UBERON:0003102!3.88e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;5.42e-13;14!UBERON:0003688;5.48e-07;6!UBERON:0002358;5.48e-07;6!UBERON:0003684;5.48e-07;6!UBERON:0001178;5.48e-07;6!UBERON:0001473;7.62e-07;8!UBERON:0004536;7.62e-07;8!UBERON:0006558;7.62e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,5.02e-13,14;UBERON:0002049,1.40e-10,78;UBERON:0007798,1.40e-10,78;UBERON:0007503,2.20e-10,78;UBERON:0002384,1.11e-09,371;UBERON:0004535,4.75e-09,109;UBERON:0001009,5.23e-09,112;UBERON:0000926,5.71e-09,315;UBERON:0004120,5.71e-09,315;UBERON:0006603,5.71e-09,315;UBERON:0003104,6.54e-09,160;UBERON:0009142,6.54e-09,160;UBERON:0005256,1.41e-08,122;UBERON:0001134,4.07e-08,62;UBERON:0002036,4.07e-08,62;UBERON:0003082,4.07e-08,62;UBERON:0000055,5.81e-08,68;UBERON:0002329,9.74e-08,71;UBERON:0003059,9.74e-08,71;UBERON:0007282,9.74e-08,71;UBERON:0004290,9.74e-08,71;UBERON:0009618,9.74e-08,71;UBERON:0002100,1.03e-07,199;UBERON:0002385,1.35e-07,64;UBERON:0001015,1.35e-07,64;UBERON:0000383,1.35e-07,64;UBERON:0003077,1.67e-07,72;UBERON:0007285,1.67e-07,72;UBERON:0007524,2.80e-07,73;UBERON:0003688,2.88e-07,6;UBERON:0002358,2.88e-07,6;UBERON:0003684,2.88e-07,6;UBERON:0001178,2.88e-07,6;UBERON:0003914,4.50e-07,117;UBERON:0001473,4.68e-07,8;UBERON:0004536,4.68e-07,8;UBERON:0006558,4.68e-07,8 | |||
|phase1_expression=5.26867299884614,4.06790995392868,1.9733616573436,12.0087958023756,6.25745532198203,7.85104671690332,2.53299878168311,2.52687949370732,3.65659879479774,0.245733936501509,1.39560233594486,2.83973783769224,2.90143676051299,0.123766352960047,0.331397375727916,0.672325146451775,1.20538905604795,2.92124036154949,1.95173119516203,1.35433163884467,1.42800483870977,0.313454721478088,0,0,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,1.40648818027883,0.361439152384566,0.50133791063589,0.289693037921647,0.795285947051099,0,0.189069634328136,0.886917589850256,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0.596287222100115,0,0,0,0,0.275118041940067,1.04497483268405,2.84258435086262,1.06729878806013,3.01248551488203,3.62546385398232,0,1.70843440283719,2.20597848207521,2.43042584364528,1.16089646769304,1.34717623575702,1.12611480483322,0,0,0.732806975721629,0,0,0,0.993943903390637,1.13967460498122,1.19168262731897,0.286836620748814,1.41867352879343,0,0,0.49333509683432,0.622422070799533,4.58016285036939,1.79808093424805,4.99479511228274,2.30470369792,1.40592859100278,0.624320153660641,0,0.149448680551801,0.117434498643765,0.485618833104395,0.421352420106746,0.408308342509787,1.35117749042945,0.206651562351531,5.94001428641027,6.18167323196392,2.73048408581408,2.15585442544872,0.841680569770331,0.125118519871964,0,1.31693286264251,0.919463387397059,5.25833206173089,1.24775401476023,0.179389635688862,1.06778694409284,1.90738711043606,0.900273288253207,4.01904864029912,0.772921620136887,1.48893485065272,1.85653965465393,2.63079913935236,0.757301322732344,2.48534726334208,3.39456719319505,2.4850671476163,2.31729825923573,1.01736355386293,0,0,0,0,0,0.348581828608555,0,0,0,1.56449532329816,1.92972281457866,1.38134921352481,3.25057549622385,2.16563844500876,0,0,0,0,0.217879444092406,0,0,0,0,0,4.20725321410337,2.8810180793198,4.41026134156626,0,0,0,0,0.122988438543114,1.20097467208968,0,0,0,0,0.651616610620649,2.07986957055916,0,0.115930404975077,3.75707821554629,1.73239737313289,2.77791307545966,1.90254152234598,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0,0.784917590417525,0.87192013766656,0.22001485746285,2.84397774667111,7.15312891703765,4.22651376278,1.06375246633948,1.04007436911366,0.514414748524284,1.41849132023278,0.266422179016099,1.14382394926518,6.51145926469732,7.40916303102692,2.28015329005615,2.48774364119782,3.95975936466715,0,0,0,0,0,0,1.67737398844108,1.14861935834114,2.85273810081437,0.723906533337896,0.410952645100767,2.14873155887875,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,1.59498939234882,3.00102312635806,1.89885516589815,0,0,0.157702415033935,0.117141414992713,2.70851489754947,4.5481500811197,4.1389228517002,1.32845119707087,1.29058417979192,1.56390506042549,4.11182430671755,7.54915532383883,0,0,0,0.606255142892519,1.66435439510497,2.11673205330776,3.72161711728165,2.30192959932094,6.45518217196069,1.66580894032411,5.62877973973374,5.46903331888265,5.93672265779964,2.31314540703983,3.01854933032316,2.7101961484557,2.07701771673448,3.02146983995894,0,0,0,1.26295892981067,3.09554985611419,1.83574180943194,0,0.0770153371044148,1.56869953835371,4.38417673959782,0.211103257785751,5.68666920354483,2.38131187387122,0.863663664408557,7.71136263451447,1.62567862526312,2.50844886927427,0,0,0.447749509444357,0,0,0,0.656029291399411,0.325378394664303,0.412164046590889,1.37354197227515,1.48517099857058,0,0.650060246036521,0,1.16004861950546,0.462145851343933,0.767518373630648,0.689182862422653,1.71872391789238,0.870100163485371,0.852266274161009,0.623224249527161,0,0,0,0,1.39453664789186,6.61105928344344,2.0911118104818,1.23213432070436,0,2.60979897622522,0.18532421910392,0.572499546967965,2.60510858551767,1.89827654831236,5.52827562379092,1.02359116524534,2.56763392820352,0.318203247925937,0.78494864019923,1.2591072030832,4.11805544604082,2.12062324222236,0.606547444719948,0,2.94880919367287,7.80213982543345,0.974853958525138,2.11300293513511,0.818999468447914,1.1312434556297,0,2.75682671773062,0,0.438450885253763,3.47265320560013,1.9676842561399,0,0.6196469961995,0.845086807596724,2.15117028306077,3.83171259951173,1.426684205925,0,0.844430541190656,0.329294892959902,1.13841952129715,3.14941248220485,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577076851905779,0.355709216742071,0.478278818186467,0,1.91505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,1.57768678274367,0,0,0.23874448473769,2.67268212749375,0,0,0.140669416410513,0.556543525114529,0.494411622680279,0,0.19924798825107,0,1.51159648712566,0,0,0.622079175323615,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.0927680981618513,0,0,0.0874599999961957,0,0.227586896570999,2.03402920234213,0,0,0,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| ||
|short_description=p4@CTHRC1 | |||
}} | }} |
Latest revision as of 00:20, 25 September 2015
Short description: | p4@CTHRC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CTHRC1_5end |
Coexpression cluster: | C4714_Adipocyte_Osteoblast_Preadipocyte_Fibroblast_Mesenchymal_tenocyte_mesenchymal |
Association with transcript: | -33bp_to_ENST00000330295_5end |
EntrezGene: | CTHRC1 |
HGNC: | 18831 |
UniProt: | Q96CG8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.81e-17 | 427 |
somatic stem cell | 1.84e-16 | 433 |
stem cell | 2.06e-15 | 441 |
fibroblast | 5.46e-15 | 76 |
preadipocyte | 4.32e-12 | 12 |
mesenchymal stem cell of adipose | 1.26e-09 | 8 |
connective tissue cell | 1.55e-09 | 361 |
smooth muscle cell | 7.54e-09 | 43 |
smooth muscle myoblast | 7.54e-09 | 43 |
muscle cell | 9.04e-09 | 55 |
muscle precursor cell | 1.23e-08 | 58 |
myoblast | 1.23e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.23e-08 | 58 |
fat cell | 3.14e-08 | 15 |
mesenchymal cell | 3.95e-08 | 354 |
mesodermal cell | 7.20e-08 | 121 |
extraembryonic cell | 3.54e-07 | 19 |
electrically responsive cell | 4.16e-07 | 61 |
electrically active cell | 4.16e-07 | 61 |
motile cell | 9.63e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.49e-08 | 14 |