FFCP PHASE1:Hg19::chr7:98870948..98870967,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84176 | |EntrezGene=84176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=31038 | |HGNC=31038 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=24bp_to_ENST00000330888,NR_002147,uc003upw.2_5end | |||
|cluster_id=chr7:98870948..98870967,+ | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_3_at_MYH16_5end | |||
|id=chr7:98870948..98870967,+ | |||
|ontology_enrichment_celltype=CL:0000313!1.61e-13!1;CL:0000066!7.15e-08!254;CL:0002535!1.87e-07!2;CL:0000159!2.12e-07!2;CL:1000415!2.40e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000083;1.13e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,1.13e-13,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.02e-22!14;DOID:305!1.93e-15!106;DOID:2152!1.61e-13!1;DOID:0050687!4.72e-11!143;DOID:4929!9.87e-08!2;DOID:4074!1.05e-07!2;DOID:4905!1.05e-07!2;DOID:3498!1.05e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:4929;5.56e-26;2!DOID:4074;7.14e-26;2!DOID:4905;7.14e-26;2!DOID:3498;7.14e-26;2!DOID:1749;3.41e-15;14!DOID:1793;1.13e-13;4!DOID:170;1.44e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,5.56e-26,2;DOID:4074,7.14e-26,2;DOID:4905,7.14e-26,2;DOID:3498,7.14e-26,2;DOID:1749,3.41e-15,14;DOID:1793,1.13e-13,4;DOID:170,1.44e-09,6;DOID:305,2.62e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0002294!1.29e-16!7;UBERON:0001173!1.29e-16!7;UBERON:0004912!1.29e-16!7;UBERON:0004913!3.50e-14!1;UBERON:0003703!3.50e-14!1;UBERON:0001174!3.50e-14!1;UBERON:0004914!3.50e-14!1;UBERON:0000997!4.53e-14!1;UBERON:0005056!4.53e-14!1;UBERON:0002394!1.26e-13!4;UBERON:0003928!1.26e-13!4;UBERON:0004911!1.61e-13!1;UBERON:0000466!1.26e-08!126;UBERON:0006955!1.87e-07!2;UBERON:0004801!1.87e-07!2;UBERON:0004909!2.12e-07!2;UBERON:0000464!8.92e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.42e-50;1!UBERON:0003703;2.42e-50;1!UBERON:0001174;2.42e-50;1!UBERON:0004914;2.42e-50;1!UBERON:0000997;6.58e-50;1!UBERON:0005056;6.58e-50;1!UBERON:0004176;6.58e-50;1!UBERON:0002114;8.00e-18;2!UBERON:0002394;1.00e-13;4!UBERON:0003928;1.00e-13;4!UBERON:0002108;2.94e-11;4!UBERON:0002294;2.03e-08;7!UBERON:0001173;2.03e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.42e-50,1;UBERON:0003703,2.42e-50,1;UBERON:0001174,2.42e-50,1;UBERON:0004914,2.42e-50,1;UBERON:0000997,6.58e-50,1;UBERON:0005056,6.58e-50,1;UBERON:0002114,8.00e-18,2;UBERON:0002108,2.94e-11,4;UBERON:0002394,1.32e-09,6;UBERON:0003928,1.32e-09,6;UBERON:0002294,7.91e-07,9;UBERON:0001173,7.91e-07,9;UBERON:0004912,7.91e-07,9 | |||
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|short_description=p3@MYH16 | |||
}} | }} |
Latest revision as of 08:00, 20 September 2015
Short description: | p3@MYH16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MYH16_5end |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | 24bp_to_ENST00000330888, NR_002147, uc003upw.2_5end |
EntrezGene: | MYH16 |
HGNC: | 31038 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 1.13e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.42e-50 | 1 |
extrahepatic bile duct | 2.42e-50 | 1 |
common bile duct | 2.42e-50 | 1 |
duodenal papilla | 2.42e-50 | 1 |
mammalian vulva | 6.58e-50 | 1 |
external female genitalia | 6.58e-50 | 1 |
duodenum | 8.00e-18 | 2 |
small intestine | 2.94e-11 | 4 |
bile duct | 1.32e-09 | 6 |
digestive system duct | 1.32e-09 | 6 |
biliary system | 7.91e-07 | 9 |
biliary tree | 7.91e-07 | 9 |
biliary bud | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 5.56e-26 | 2 |
pancreas adenocarcinoma | 7.14e-26 | 2 |
pancreatic carcinoma | 7.14e-26 | 2 |
pancreatic ductal adenocarcinoma | 7.14e-26 | 2 |
squamous cell carcinoma | 3.41e-15 | 14 |
pancreatic cancer | 1.13e-13 | 4 |
endocrine gland cancer | 1.44e-09 | 6 |
carcinoma | 2.62e-08 | 106 |