FFCP PHASE1:Hg19::chr7:98030297..98030308,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:98030297..98030308,- to FFCP PHASE1:Hg19::chr7:98030297..98030308,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55971 | |EntrezGene=55971 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21649 | |HGNC=21649 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHR4 | |UniProt=Q9UHR4 | ||
|association_with_transcript=71bp_to_ENST00000005260,ENST00000462558_5end | |||
|cluster_id=chr7:98030297..98030308,- | |||
|description=CAGE_peak_3_at_BAIAP2L1_5end | |||
|id=chr7:98030297..98030308,- | |||
|ontology_enrichment_celltype=CL:0000066!1.08e-23!254;CL:0000223!2.30e-09!59;CL:0002076!3.00e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0002076;7.37e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.43e-21,253;CL:0002076,2.03e-08,42;CL:0000223,6.31e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.27e-22!106;DOID:0050687!6.62e-20!143;DOID:162!2.37e-15!235;DOID:14566!8.14e-15!239;DOID:1749!9.98e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.91e-10;14!DOID:299;2.97e-10;25!DOID:305;2.88e-08;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.61e-23,106;DOID:0050687,1.45e-21,143;DOID:162,1.14e-15,235;DOID:14566,7.95e-15,239;DOID:1749,1.05e-10,14;DOID:299,2.08e-10,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.29e-21!169;UBERON:0000925!2.29e-21!169;UBERON:0006595!2.29e-21!169;UBERON:0001007!6.91e-18!155;UBERON:0001555!6.91e-18!155;UBERON:0007026!6.91e-18!155;UBERON:0004921!2.57e-14!129;UBERON:0004185!2.57e-14!129;UBERON:0000077!1.24e-12!130;UBERON:0000466!1.90e-12!126;UBERON:0005911!9.81e-11!82;UBERON:0000464!1.42e-10!104;UBERON:0001041!1.44e-10!98;UBERON:0005177!1.90e-10!107;UBERON:0003104!4.19e-10!238;UBERON:0009142!4.19e-10!238;UBERON:0005409!2.79e-09!35;UBERON:0001048!4.51e-09!168;UBERON:0000062!2.34e-08!511;UBERON:0000481!1.18e-07!347;UBERON:0001004!1.36e-07!72;UBERON:0000160!4.04e-07!27;UBERON:0003886!4.45e-07!63;UBERON:0002553!4.87e-07!70;UBERON:0000065!7.71e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;1.15e-09;7!UBERON:0001173;1.15e-09;7!UBERON:0002075;2.37e-08;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.28e-10,160;UBERON:0000925,5.28e-10,160;UBERON:0006595,5.28e-10,160;UBERON:0002075,1.24e-08,18;UBERON:0005177,4.95e-08,101;UBERON:0001007,5.65e-08,145;UBERON:0001555,5.65e-08,145;UBERON:0007026,5.65e-08,145;UBERON:0002294,6.73e-07,9;UBERON:0001173,6.73e-07,9;UBERON:0004912,6.73e-07,9;UBERON:0005911,7.14e-07,82 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0.446961094427288,0,0,0,0,2.45733936501509,4.88460817580699,1.52908960491121,1.84636884759917,0.247532705920093,0.331397375727916,0,0,0,0,0.246242116153576,1.02000345622126,0,0,0,0.251085279189606,0.458480434487708,0.328402357799783,0.629686250509434,0,0,0,0,0.30120591877825,0.739508020333575,0.542270404062111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,2.75208386025565,0,1.45990461090791,0.567208902984407,0,0.43917392846563,0.654895377488563,5.46442932438813,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.673588117878509,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,1.19168262731897,0,0.354668382198357,1.12135520028461,0,0.49333509683432,0,0.134710672069688,0,0.605429710579726,0,0.234321431833797,0.312160076830321,0.570471821544449,0.149448680551801,0,0,0,0,1.22834317311768,0.206651562351531,0,0.494533858557114,0.910161361938026,0.718618141816238,0,0.625592599359821,0.277064115484183,0,1.5324389789951,0,0.453728732640084,0.538168907066586,0.427114777637135,0.211931901159562,0.900273288253207,0.515262646192195,0,0.18611685633159,0.843881661206331,1.26668106709558,0.252433774244115,0.368199594569197,0,0.355009592516614,0.10075209822764,0.169560592310488,3.47869535693934,7.9096374971342,7.7437240755031,0.243947412259191,0.530119073285941,0.116193942869518,0.10366105501537,0.252320850875628,0.36497735907583,1.56449532329816,1.28648187638577,2.76269842704961,0,0,0.946454400318751,1.18009283054671,0.241011029883482,0.772057809126758,0.871517776369625,0.949082476444386,0.404493924480493,0.196221465125346,0,0.738155454624648,0,0.4115740113314,1.47008711385542,1.26755034821831,0,0.590789906681404,0,0.860919069801795,0.514703430895577,4.60951198716227,0,2.41269533787914,3.61094936118265,0.325808305310325,1.03993478527958,0,0,1.05667824812239,0,0,0,0,0,0,0,0,1.87467667973554,3.35964256397719,0.425325291727159,0.806026704325635,1.16253575405585,0.383382679165211,0,0,0.207328115540772,0,0,0.761974731506028,0.381988425558278,0,0,0.411309970813294,0.300343057843917,1.71495859578347,0.448524337381443,0.43596006883328,0.80672114403045,1.42198887333556,0,0,0.531876233169741,1.04007436911366,0.514414748524284,1.41849132023278,0,0,0,0.823240336780769,0,0.355391948742546,0,0.602878754119172,0.871533458600294,0.699810938274399,0,0,0,0.479249710983165,1.14861935834114,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.542530047399471,0.415941723061614,0.535286966391485,1.41932173530541,1.7571212248907,0,0,0,0,0.921845842708516,0.173767228936166,0.587403472388222,0,0,0,0,0,1.66435439510497,0.907170879989041,0,1.07423381301644,0.280660094433074,0.768834895534206,0,1.60853921143608,0,0.154209693802656,0,0.246381468041427,0,0,0.604297247958111,1.40354529212299,0.828728900423067,0.114814448164607,0,0.131124414959424,0.902399225814824,0.308061348417659,0.784349769176855,1.46139224653261,1.05551628892876,0,0,0.431831832204279,1.54227252690289,0.541892875087706,2.00675909541941,0.254876273045038,0.831076008928724,1.79099803777743,0,0,0,0.656029291399411,0.325378394664303,0.9273691048295,1.00726411300178,1.15513299888823,3.44559322797703,3.90036147621913,0,0.870036464629098,0,0,0.275673144969061,0,0,0.170453254832202,0.534192213880424,1.81813406897076,2.11409074101617,2.04180339991335,1.8208400553999,0,0,0,0,0.532306030317022,0,0,0.286249773483982,3.72158369359667,0.949138274156178,1.5250415513906,0.767693373934002,0,0,0,0.359744915166629,0,0.942499218765491,0,0,0,0,0.487426979262569,0,0,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0.573645408816206,0.392996164052485,0.35667105148125,0,0,0,0,0.699869440489966,3.75266239629497,0.670302275535787,0,0.564862804660675,1.29151611801369,1.68471475667626,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.747768497892312,0,1.96032172784825,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0.338583555603207,0,0.201799707191048,5.53600108997424,0,0.614481528616916,0,0.333698283423817,0,0,0,0,0,0,6.36277837387947,0,0.728163130497081,7.80103689942349,0,4.7748896947538,0.296964680832639,0.307160702099232,0,0.140669416410513,0.445234820091624,0.824019371133798,3.3780065300479,0,0.552567831062295,2.26739473068848,0,0.861593638227486,0,6.38065293146021,8.77203755910485,0,0,0,1.11136990144637,0,0,0,0,0,1.44999915086959,1.70690172428249,2.54253650292766,4.25497827182285,0,0,1.04174996959975,0,0,0,0,0,0,4.24860007724062,0.975966209950223,0.153900517007594,1.02547850262301,2.07507513949254,2.15418346583453,14.8846899533151,7.01802551410223,1.28236630762607,1.5991043280559,0,0,0,1.35357396370308,0.19606253431774,0.167821586975843,0,0,2.95397290339238,2.93819054686466,1.55488378577335,0,1.99052386215701,1.06149077404007,4.888241159469,0.593042257361244,0.123563938946503,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| ||
|short_description=p3@BAIAP2L1 | |||
}} | }} |
Latest revision as of 07:09, 20 September 2015
Short description: | p3@BAIAP2L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BAIAP2L1_5end |
Coexpression cluster: | NA |
Association with transcript: | 71bp_to_ENST00000005260, ENST00000462558_5end |
EntrezGene: | BAIAP2L1 |
HGNC: | 21649 |
UniProt: | Q9UHR4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.43e-21 | 253 |
endo-epithelial cell | 2.03e-08 | 42 |
endodermal cell | 6.31e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.28e-10 | 160 |
endoderm | 5.28e-10 | 160 |
presumptive endoderm | 5.28e-10 | 160 |
viscus | 1.24e-08 | 18 |
trunk region element | 4.95e-08 | 101 |
digestive system | 5.65e-08 | 145 |
digestive tract | 5.65e-08 | 145 |
primitive gut | 5.65e-08 | 145 |
biliary system | 6.73e-07 | 9 |
biliary tree | 6.73e-07 | 9 |
biliary bud | 6.73e-07 | 9 |
endo-epithelium | 7.14e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.61e-23 | 106 |
cell type cancer | 1.45e-21 | 143 |
cancer | 1.14e-15 | 235 |
disease of cellular proliferation | 7.95e-15 | 239 |
squamous cell carcinoma | 1.05e-10 | 14 |
adenocarcinoma | 2.08e-10 | 25 |