FFCP PHASE1:Hg19::chr7:51384451..51384522,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:51384451..51384522,- to FFCP PHASE1:Hg19::chr7:51384451..51384522,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23242 | |EntrezGene=23242 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22199 | |HGNC=22199 | ||
|TSSclassifier=strong | |||
|UniProt=O75128 | |UniProt=O75128 | ||
|association_with_transcript=0bp_to_ENST00000265136,ENST00000395540,ENST00000395542,ENST00000441453,NM_015198,uc003tpr.3,uc003tps.2,uc003tpt.2,uc010kzc.2,uc011kcl.1_5end | |||
|cluster_id=chr7:51384451..51384522,- | |||
|description=CAGE_peak_1_at_COBL_5end | |||
|id=chr7:51384451..51384522,- | |||
|ontology_enrichment_celltype=CL:0000066!3.93e-08!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.30e-11;29!UBERON:0006601;8.69e-10;82!UBERON:0002532;5.07e-09;206!UBERON:0010316;5.07e-09;206!UBERON:0006595;4.11e-08;86!UBERON:0001041;4.09e-07;30 | |||
|ontology_enrichment_disease=DOID:305!9.85e-19!106;DOID:0050687!4.45e-13!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.14e-17,106;DOID:0050687,4.18e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.09e-43!115;UBERON:0001049!3.89e-28!57;UBERON:0005068!3.89e-28!57;UBERON:0006241!3.89e-28!57;UBERON:0007135!3.89e-28!57;UBERON:0001017!2.63e-26!82;UBERON:0005743!2.62e-25!86;UBERON:0003080!1.60e-24!42;UBERON:0002780!2.66e-24!41;UBERON:0001890!2.66e-24!41;UBERON:0006240!2.66e-24!41;UBERON:0002616!2.14e-23!59;UBERON:0000955!1.89e-22!69;UBERON:0006238!1.89e-22!69;UBERON:0003075!7.85e-22!86;UBERON:0007284!7.85e-22!86;UBERON:0000073!3.24e-21!94;UBERON:0001016!3.24e-21!94;UBERON:0001893!3.83e-21!34;UBERON:0002020!1.15e-20!34;UBERON:0003528!1.15e-20!34;UBERON:0002791!2.15e-20!33;UBERON:0000481!5.30e-20!347;UBERON:0000062!1.32e-19!511;UBERON:0001869!1.32e-19!32;UBERON:0002346!1.40e-19!90;UBERON:0004121!9.19e-18!169;UBERON:0000064!2.41e-17!219;UBERON:0004921!3.68e-17!129;UBERON:0004185!3.68e-17!129;UBERON:0000153!1.19e-16!129;UBERON:0007811!1.19e-16!129;UBERON:0000924!1.79e-16!173;UBERON:0006601!1.79e-16!173;UBERON:0003056!2.65e-16!61;UBERON:0000033!2.82e-16!123;UBERON:0000956!8.17e-15!25;UBERON:0000203!8.17e-15!25;UBERON:0001007!8.18e-15!155;UBERON:0001555!8.18e-15!155;UBERON:0007026!8.18e-15!155;UBERON:0002619!2.83e-14!22;UBERON:0000077!8.86e-14!130;UBERON:0001041!1.14e-13!98;UBERON:0000922!1.15e-13!612;UBERON:0004119!1.64e-13!169;UBERON:0000925!1.64e-13!169;UBERON:0006595!1.64e-13!169;UBERON:0001950!2.39e-13!20;UBERON:0000475!2.91e-12!365;UBERON:0000468!3.93e-12!659;UBERON:0004111!1.78e-11!241;UBERON:0000025!1.78e-11!194;UBERON:0000467!2.44e-11!625;UBERON:0002050!2.70e-11!605;UBERON:0005423!2.70e-11!605;UBERON:0000480!3.50e-11!626;UBERON:0000923!4.55e-11!604;UBERON:0005291!4.55e-11!604;UBERON:0006598!4.55e-11!604;UBERON:0002532!4.55e-11!604;UBERON:0000477!7.30e-11!286;UBERON:0008947!1.02e-10!38;UBERON:0003258!1.02e-10!38;UBERON:0000065!1.43e-10!53;UBERON:0001004!1.80e-10!72;UBERON:0000483!1.16e-09!309;UBERON:0000119!3.60e-09!312;UBERON:0000072!7.02e-09!46;UBERON:0000063!1.04e-08!97;UBERON:0000466!6.07e-08!126;UBERON:0002420!1.99e-07!9;UBERON:0007245!1.99e-07!9;UBERON:0010009!1.99e-07!9;UBERON:0010011!1.99e-07!9;UBERON:0000454!1.99e-07!9;UBERON:0002308!2.29e-07!9;UBERON:0000125!2.29e-07!9;UBERON:0005177!2.45e-07!107;UBERON:0001048!3.59e-07!168;UBERON:0003104!7.34e-07!238;UBERON:0009142!7.34e-07!238;UBERON:0001737!7.65e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;8.29e-21;34!UBERON:0001869;2.82e-20;32!UBERON:0002791;2.85e-20;32!UBERON:0003528;3.69e-20;34!UBERON:0002020;3.69e-20;34!UBERON:0002780;3.99e-20;41!UBERON:0001890;3.99e-20;41!UBERON:0000073;1.62e-17;53!UBERON:0002616;1.62e-17;53!UBERON:0000956;7.55e-17;25!UBERON:0000203;7.55e-17;25!UBERON:0002619;3.25e-16;22!UBERON:0001950;3.83e-15;20!UBERON:0007023;1.30e-13;114!UBERON:0000955;1.28e-11;68!UBERON:0001017;4.16e-11;75!UBERON:0001016;1.37e-09;83!UBERON:0004921;1.08e-08;33!UBERON:0002420;2.76e-08;9!UBERON:0007245;2.76e-08;9!UBERON:0010009;2.76e-08;9!UBERON:0010011;2.76e-08;9!UBERON:0000454;2.76e-08;9!UBERON:0000125;3.12e-08;9!UBERON:0002308;3.12e-08;9!UBERON:0005409;1.15e-07;22!UBERON:0001737;1.26e-07;9!UBERON:0001557;1.26e-07;9!UBERON:0009663;4.97e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.19e-49,114;UBERON:0011216,6.63e-38,223;UBERON:0001049,2.13e-31,56;UBERON:0005068,2.13e-31,56;UBERON:0006241,2.13e-31,56;UBERON:0007135,2.13e-31,56;UBERON:0000073,3.98e-30,53;UBERON:0002616,3.98e-30,53;UBERON:0002780,1.03e-27,41;UBERON:0001890,1.03e-27,41;UBERON:0003080,1.03e-27,41;UBERON:0006240,1.03e-27,41;UBERON:0001017,1.25e-27,81;UBERON:0001893,4.46e-24,34;UBERON:0000955,5.97e-24,68;UBERON:0006238,5.97e-24,68;UBERON:0001016,1.22e-23,89;UBERON:0003528,1.58e-23,34;UBERON:0002020,1.58e-23,34;UBERON:0001869,2.61e-22,32;UBERON:0002791,2.83e-22,32;UBERON:0003075,4.41e-22,82;UBERON:0007284,4.41e-22,82;UBERON:0002346,5.54e-20,86;UBERON:0010371,8.55e-20,104;UBERON:0003056,9.10e-18,61;UBERON:0000956,8.52e-17,25;UBERON:0000203,8.52e-17,25;UBERON:0002619,3.57e-16,22;UBERON:0004921,5.50e-16,118;UBERON:0001950,4.14e-15,20;UBERON:0004121,5.15e-15,171;UBERON:0000924,5.15e-15,171;UBERON:0006601,5.15e-15,171;UBERON:0004111,5.53e-14,240;UBERON:0000025,1.10e-13,192;UBERON:0010314,3.41e-13,132;UBERON:0001007,3.95e-13,145;UBERON:0001555,3.95e-13,145;UBERON:0007026,3.95e-13,145;UBERON:0001041,1.32e-12,87;UBERON:0000922,5.07e-12,592;UBERON:0004119,2.35e-11,160;UBERON:0000925,2.35e-11,160;UBERON:0006595,2.35e-11,160;UBERON:0005423,3.16e-10,581;UBERON:0000483,3.01e-09,306;UBERON:0000119,7.72e-09,309;UBERON:0002050,1.28e-08,564;UBERON:0002420,2.62e-08,9;UBERON:0007245,2.62e-08,9;UBERON:0010009,2.62e-08,9;UBERON:0010011,2.62e-08,9;UBERON:0000454,2.62e-08,9;UBERON:0000125,3.09e-08,9;UBERON:0002308,3.09e-08,9;UBERON:0008947,3.45e-08,38;UBERON:0003258,3.45e-08,38;UBERON:0000923,3.46e-08,560;UBERON:0010316,3.46e-08,560;UBERON:0005291,3.46e-08,560;UBERON:0006598,3.46e-08,560;UBERON:0010317,3.46e-08,560;UBERON:0002532,3.46e-08,560;UBERON:0001004,6.68e-08,74;UBERON:0000065,1.13e-07,54;UBERON:0001737,1.23e-07,9;UBERON:0009663,4.83e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,8.3549538410513,9.07141518364156,0,0,0,0,0,0,0,0,0.123121058076788,0,0,4.00730381983479,3.69560947696787,7.28147309649856,0,0.0821005894499457,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0.087834785693126,14.604166917995,0.364295288292542,1.48313777113772,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,1.36373060295417,1.72082757233402,27.2001364668998,20.9397033947947,14.2918549729508,19.0736341228282,14.3822884999108,4.37972830890996,0,0,0,0,0,28.1570184094828,26.467796342262,23.8600919584647,26.4705534557745,23.9667388501647,23.7270619111097,21.5730093056263,25.508790466295,21.5458407889979,0,0,1.2347220339942,0,30.4212083572394,12.7767538168091,37.2197641209285,0,31.6080287055802,0,1.64625428112938,3.37205259772859,0.301586917234893,0.833296006426766,0,0,0,1.507095264676,0,0,0,0,8.69224837755203,4.29243081047436,0,0.234004265139238,0,5.62403003920662,0.503946384596579,1.84307626415102,0,0,1.53353071666084,0,0.176096868026452,5.39053100406007,2.88239906833923,15.7803041782975,0.126995788584338,0,2.34434894420094,0,0.616964956219941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,4.31960861178188,3.90419561572865,3.09315525111078,0.837581326671744,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.20601190002797,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,20.9086847793506,0.200506470303285,1.93370076765382,0,0,0,2.70719767744447,2.92658280996776,2.35304930753057,1.46139224653261,1.68882606228601,0,0,0,0,0,0,6.626783099171,6.64860807142979,0.447749509444357,0,0,0,0,0.325378394664303,19.8869152480104,0,0,1.14853107599234,0.650060246036521,0,2.70678011217942,0,2.14905144616581,3.03240459465967,0,1.16013355131383,2.30111894023472,21.7238166978039,0.991709492165869,2.49847087574638,1.78657797492418,4.8555734810664,0,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,1.08890984861323,19.2994791592397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,16.6555080963316,4.10222901961303,0.970884173996107,0,0.284136146806413,35.0954392564404,3.26661148915902,24.5728561679386,19.882952955326,25.1798255374818,0,0,1.05562704063997,3.18796781201712,7.45966571934099,17.1314268540908,0,0,0,22.556956137979,7.16084698702437,0,1.97286811273867,0,0,44.5893063203801,40.0758184059197,3.99227596002388,5.98983850496036,1.57427999993152,5.07499702804355,0.341380344856499,3.55955110409873,51.2961269436422,3.44743373241465,0.874813840149763,0.347249989866585,29.2294657318567,28.0989701997201,13.7323562685375,25.101492004388,20.3927857077948,25.0099352755529,18.3016618711903,10.177933332338,3.07801034015188,0,32.2789466143284,29.6200226552248,29.2261430470202,12.4410452295449,1.28236630762607,3.73124343213044,0,0,0,0,0,0.335643173951685,0.75901493089674,0,1.89898258075224,4.73375143661528,25.1608467152415,0,15.9241908972561,36.7098892688858,23.8301756524114,0,0.123563938946503,0.313265848516366,74.2086474117254,15.248975298677,40.2934846647583,0,8.60924323301195,4.12726645207958,8.68085686268659,13.308978765353,7.34574627913176,1.70603764996917,5.71228993775072,8.81349626876601,0,0,0,0,0,0,1.90915712168644,0.0979923974143777,0,13.2792267863943,0.51595809741485,21.576661877466,24.7772784922169,24.6346371159628,12.8025501764714,0.353024506766001,7.45736444575757,0.137041924646751,0,45.7103946801444,32.8526322994469,4.24841747333129,16.8627865844089,9.79067086952438,17.2908500584927,1.4889757501569,25.0528696878468,7.34679469739563,0.372757606696298,40.5393739540888,0.271808412147228,0.104602846312333,0,0,31.8222753016188,36.9644523008381,0,0.429765441419957,0,8.09918963689537,28.1867321534371,17.2289525898435,27.3560230683618,47.2148652950228,64.0502082858174,32.9199015184959,0,1.16495949527454,5.04212366766231,7.25259553754265,7.27958273625197,5.80722140937018,0,10.3379859675209,24.5166131000836,7.07313853246084,10.4529971813898,7.89336642255452,1.799791132412,63.4517602737519,46.716409070021,0.670869375198532,14.6578615576509,14.7921938540695,0.105600336519406,10.9365276993035,50.4736968950141,12.8645158747206,45.6843459552148,0,0,0,0,0,0.656740165994712,0,0,22.1293872853905,21.2011022259554,20.5559900614865,21.2894488805731,3.25064991980226,24.6685257810835,16.7656237731281,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| ||
|short_description=p1@COBL | |||
}} | }} |
Latest revision as of 23:21, 18 September 2015
Short description: | p1@COBL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COBL_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000265136, ENST00000395540, ENST00000395542, ENST00000441453, NM_015198, uc003tpr.3, uc003tps.2, uc003tpt.2, uc010kzc.2, uc011kcl.1_5end |
EntrezGene: | COBL |
HGNC: | 22199 |
UniProt: | O75128 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.14e-17 | 106 |
cell type cancer | 4.18e-11 | 143 |