FFCP PHASE1:Hg19::chr7:142494400..142494439,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:142494400..142494439,+ to FFCP PHASE1:Hg19::chr7:142494400..142494439,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=33bp_to_uc003wbh.3_5end | |||
|cluster_id=chr7:142494400..142494439,+ | |||
|coexpression_cluster_id=C861 | |||
|description=CAGE_peak_1_at_uc003wbh.3_5end | |||
|id=chr7:142494400..142494439,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.79e-23!53;CL:0000051!2.79e-23!53;CL:0000838!1.53e-22!52;CL:0000084!9.36e-14!25;CL:0000827!9.36e-14!25;CL:0000791!5.33e-13!18;CL:0000789!5.33e-13!18;CL:0002420!5.33e-13!18;CL:0002419!5.33e-13!18;CL:0000790!5.33e-13!18;CL:0000236!3.78e-10!14;CL:0002087!4.18e-09!119;CL:0000625!5.95e-09!11;CL:0000738!2.44e-08!140;CL:0000945!3.14e-08!24;CL:0000826!3.14e-08!24;CL:0002031!4.24e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000084;8.87e-19;25!CL:0000542;1.07e-18;53!CL:0000791;4.27e-17;18!CL:0000789;4.27e-17;18!CL:0002419;4.27e-17;18!CL:0000236;1.04e-12;13!CL:0000625;1.33e-11;11!CL:0000945;1.32e-10;24!CL:0000071;2.74e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.23e-31,53;CL:0000051,1.23e-31,53;CL:0000838,1.26e-30,52;CL:0000084,9.47e-19,25;CL:0000827,9.47e-19,25;CL:0000791,4.49e-17,18;CL:0000789,4.49e-17,18;CL:0002420,4.49e-17,18;CL:0002419,4.49e-17,18;CL:0000790,4.49e-17,18;CL:0000236,1.44e-13,14;CL:0002087,6.80e-12,115;CL:0000625,1.38e-11,11;CL:0000945,1.35e-10,24;CL:0000826,1.35e-10,24;CL:0000738,3.63e-10,136;CL:0002031,3.63e-08,120;CL:0000037,9.07e-08,168;CL:0000988,1.67e-07,177;CL:0000071,2.60e-07,18;CL:0002546,2.60e-07,18;CL:0002032,6.70e-07,161;CL:0000837,6.70e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000051;1.07e-18;53!CL:0000790;4.27e-17;18!CL:0002546;2.74e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.69e-07!115;UBERON:0001009!5.56e-07!113;UBERON:0004535!8.33e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.24e-07;15!UBERON:0000179;1.24e-07;15!UBERON:0000463;1.24e-07;15!UBERON:0004638;2.74e-07;18!UBERON:0001986;2.74e-07;18!UBERON:0004852;2.74e-07;18!UBERON:0001638;3.86e-07;9!UBERON:0003920;3.86e-07;9!UBERON:0004582;3.86e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.27e-07,15;UBERON:0000179,1.27e-07,15;UBERON:0000463,1.27e-07,15;UBERON:0004638,2.60e-07,18;UBERON:0001986,2.60e-07,18;UBERON:0004852,2.60e-07,18;UBERON:0001638,3.55e-07,9;UBERON:0003920,3.55e-07,9;UBERON:0004582,3.55e-07,9;UBERON:0004535,7.09e-07,109 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,13.2696325710815,11.8626198555313,19.6597234917155,20.0462903453625,0,0.662794751455832,0,0,0,0,1.47745269692145,7.95602695852587,0,0,0.136874425072884,0,9.32243550125005,8.37426012389447,6.92654875560377,11.8009283054671,11.1310525448192,9.90823189222886,0,0,0,0,17.9133232934151,17.6160263600908,3.32397245119126,5.21415563422368,5.64228263861215,0.895661896959697,3.2389366601898,0.515151135268373,0.145398238779565,0,0,0,0,0.309706370895104,0,0.512321413058201,0,0,1.29096936716765,0,0.188242339542605,0,0.224723484445085,0.306083892370903,1.92557416245656,0,0,0.797854630486527,0,0,1.13477044938228,0.622822248995575,0.502497330513487,0,0,0,1.10483290796269,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0,66.8785728953026,64.9904947401936,60.4866292627217,75.1045191717053,82.0811773423826,68.3955403545835,69.4097116424105,74.4161928537584,32.4451392392386,22.9022503854666,25.2300330562651,14.5388461436928,6.72610275577843,6.847986204152,4.91774425284583,9.03924754323079,6.16804496998528,18.2233279975839,20.5331027979162,16.0972253949809,15.5861382726329,19.1625985842499,20.6224135232386,17.2796437775224,13.8109970520158,15.2428670473553,13.1359941035477,10.6884637992389,12.9884508359349,16.2289728011629,12.4560713056131,9.36392898313996,14.6349733326968,14.9568332360787,13.7959377696692,19.5867643925099,17.7113784413652,22.936709831335,24.7411712465439,39.9189858668317,22.8874180998215,23.0375900077953,13.742379920758,20.1260664237414,23.8127119107104,15.7253259715291,16.848732334361,6.08262496307756,0,0,0,0,0,0,0,0,0.0945348171640679,2.4390233720882,12.560374354117,1.11332214173056,0,0,0.324547393654683,0.174129737299267,0.531831842075461,0.476981248610684,0.571994910780128,0,3.57772333260069,5.16140757063675,5.20710752411391,4.52246353539208,8.80948816040802,4.12677062910101,2.71693456497854,0,0.35576626268671,0,0,0,0,3.67663080345869,5.67099363517232,3.66128885964727,3.81699933464489,4.50445921933289,9.19899824795299,5.69559395740877,8.42728022079873,0,3.87780264148325,0,0,5.31848148991235,0,0.860509862246441,5.32002573297536,0,1.06748995729705,0.49333509683432,0.311211035399766,0.269421344139376,0.653847612453835,2.4217188423189,1.72852777344,4.92075006850973,0,0.570471821544449,0,0,0,0.140450806702248,0,0.245668634623536,0,0,0,4.55080680969013,11.4978902690598,0,0,0,0,0,0,1.47461838108027,0,0,0,0,0,0,0,0,0,0,0,0.484938170456436,0,0,1.69560592310488,0,0,0,0.609868530647977,0.265059536642971,0.929551542956147,0.621966330092223,1.7662459561294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0.4115740113314,1.47008711385542,0,0,0,0,0,0.857839051492628,0,0,0,0.185176890317059,9.12263254868909,2.07986957055916,7.21656710126366,0.231860809950154,3.87448690978212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0.448524337381443,1.30788020649984,0.36669142910475,0.646358578788889,0,0,5.05282421511254,3.12022310734098,0.257207374262142,0,1.0656887160644,0,10.3098105024374,14.8183260620538,0,0.710783897485092,15.0470855857352,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,39.4539706857216,25.6139988262505,37.087942875837,26.6953515461877,0,0,3.09315525111078,1.50764638800914,1.27587750330633,0,0,2.07207756718018,0.12269149171914,1.00034104211935,1.62759014219841,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,1.03473071292505,3.32112799267718,0.184369168541703,0.347534457872331,0.587403472388222,1.37257369524342,8.47748907103838,8.62856803274467,12.3803967051995,2.42502057157008,26.6296703216795,16.9338564264621,0,0,0,0,0,0,0,0.462629081407967,0,0.246381468041427,0.519254429183621,0.116210378459959,0,0.40101294060657,0,5.51109351190112,4.37018803216121,0.131124414959424,6.31679458070376,0.924184045252977,3.92174884588428,1.46139224653261,1.89992932007176,1.13733384070897,0,0.215915916102139,0,3.79325012561394,1.00337954770971,2.54876273045038,3.3243040357149,2.0148727924996,0.438519753291869,0.522870902049801,0,0,0,0.618246069886334,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0.137836572484531,0.107420244868274,0.290033387828457,0.681813019328807,0,0.826424576804891,0.768760269460425,0,0.30347334256665,1.39453664789186,0.31481234683064,0,0,9.04920251538937,1.73986598415015,0.37064843820784,3.00562262158182,0.744316738719335,13.9206946876239,0.190630193923825,2.303080121802,0,0.318203247925937,0.78494864019923,1.79872457583315,1.64722217841633,3.88780927740765,5.0545620393329,0,0,3.90106991271672,0.487426979262569,0,9.69149370996699,1.69686518344455,0,1.10273068709225,0,0.876901770507525,2.89387767133344,8.52663177660623,0,5.88664646389525,10.1410416911607,17.9264190255064,9.53015697827275,0,5.67617702512956,0.211107635297664,0,10.2457756916743,2.79947776195986,0,0,0,0.188287601553558,3.01353760869861,0,0.886860307073351,3.67557440331135,10.1489521846434,9.1756464857085,9.68400218196076,12.8645158747206,15.6317663772754,7.78167973431261,7.02040868409549,12.6900028207083,0,0,0,34.187784223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| ||
|short_description=p1@uc003wbh.3 | |||
}} | }} |
Latest revision as of 06:57, 31 July 2015
Short description: | p1@uc003wbh.3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc003wbh.3_5end |
Coexpression cluster: | C861_CD19_chronic_NK_Natural_lymphangiectasia_acute_CD8 |
Association with transcript: | 33bp_to_uc003wbh.3_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.23e-31 | 53 |
common lymphoid progenitor | 1.23e-31 | 53 |
lymphoid lineage restricted progenitor cell | 1.26e-30 | 52 |
T cell | 9.47e-19 | 25 |
pro-T cell | 9.47e-19 | 25 |
mature alpha-beta T cell | 4.49e-17 | 18 |
alpha-beta T cell | 4.49e-17 | 18 |
immature T cell | 4.49e-17 | 18 |
mature T cell | 4.49e-17 | 18 |
immature alpha-beta T cell | 4.49e-17 | 18 |
B cell | 1.44e-13 | 14 |
nongranular leukocyte | 6.80e-12 | 115 |
CD8-positive, alpha-beta T cell | 1.38e-11 | 11 |
lymphocyte of B lineage | 1.35e-10 | 24 |
pro-B cell | 1.35e-10 | 24 |
leukocyte | 3.63e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 3.63e-08 | 120 |
hematopoietic stem cell | 9.07e-08 | 168 |
hematopoietic cell | 1.67e-07 | 177 |
blood vessel endothelial cell | 2.60e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.60e-07 | 18 |
hematopoietic oligopotent progenitor cell | 6.70e-07 | 161 |
hematopoietic multipotent progenitor cell | 6.70e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 1.27e-07 | 15 |
haemolymphatic fluid | 1.27e-07 | 15 |
organism substance | 1.27e-07 | 15 |
blood vessel endothelium | 2.60e-07 | 18 |
endothelium | 2.60e-07 | 18 |
cardiovascular system endothelium | 2.60e-07 | 18 |
vein | 3.55e-07 | 9 |
venous blood vessel | 3.55e-07 | 9 |
venous system | 3.55e-07 | 9 |
cardiovascular system | 7.09e-07 | 109 |