FFCP PHASE1:Hg19::chr7:140225639..140225651,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:140225639..140225651,- | |||
|description=CAGE_peak_at_chr7:140225639..140225651,- | |||
|id=chr7:140225639..140225651,- | |||
|ontology_enrichment_celltype=CL:0000239!1.22e-10!3;CL:1000615!1.22e-10!3;CL:0002306!1.22e-10!3;CL:0002166!3.27e-10!3;CL:0002621!3.58e-10!3;CL:0000066!4.71e-09!254;CL:0000342!4.72e-08!1;CL:0002565!4.72e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000239;9.45e-18;3!CL:1000615;9.45e-18;3!CL:0000322;9.45e-18;3!CL:0000346;9.45e-18;3!CL:1000428;9.45e-18;3!CL:0002306;9.45e-18;3!CL:0002559;3.26e-11;5!CL:0000039;1.89e-08;7!CL:0000586;1.89e-08;7!CL:0002202;8.37e-07;9!CL:0002632;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,8.00e-18,3;CL:1000428,8.00e-18,3;CL:0000239,9.46e-18,3;CL:1000615,9.46e-18,3;CL:0002306,9.46e-18,3;CL:0000322,1.12e-17,3;CL:0002559,2.94e-11,5;CL:0000039,1.89e-08,7;CL:0000586,1.89e-08,7;CL:0002202,8.85e-07,9;CL:0002632,8.85e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4468!1.80e-14!2;DOID:3111!3.57e-08!1;DOID:3603!3.57e-08!1;DOID:2355!6.24e-08!1;DOID:305!3.22e-07!106;DOID:0050687!7.75e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3910;7.14e-26;2!DOID:3908;3.26e-11;5!DOID:1325;2.18e-08;7!DOID:3904;2.18e-08;7!DOID:3905;8.37e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,9.18e-26,2;DOID:3908,3.60e-11,5;DOID:1325,2.35e-08,7;DOID:3904,2.35e-08,7;DOID:3905,8.85e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0006853!1.22e-10!3;UBERON:0007685!1.22e-10!3;UBERON:0004134!1.22e-10!3;UBERON:0001949!3.58e-10!3;UBERON:0002506!4.72e-08!1;UBERON:0001769!4.72e-08!1;UBERON:0001708!7.18e-08!4;UBERON:0001704!7.18e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;7.14e-26;2!UBERON:0002173;7.14e-26;2!UBERON:0002186;7.14e-26;2!UBERON:0004821;9.45e-18;3!UBERON:0007499;9.45e-18;3!UBERON:0003215;9.45e-18;3!UBERON:0006853;9.45e-18;3!UBERON:0007685;9.45e-18;3!UBERON:0010368;9.45e-18;3!UBERON:0009911;9.45e-18;3!UBERON:0002299;9.45e-18;3!UBERON:0000412;9.45e-18;3!UBERON:0004134;9.45e-18;3!UBERON:0001992;9.45e-18;3!UBERON:0006524;9.45e-18;3!UBERON:0008874;9.45e-18;3!UBERON:0002169;9.45e-18;3!UBERON:0004894;9.45e-18;3!UBERON:0009856;1.13e-13;4!UBERON:0002073;3.26e-11;5!UBERON:0000473;1.49e-07;8!UBERON:0002067;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,9.18e-26,2;UBERON:0002173,9.18e-26,2;UBERON:0002186,9.18e-26,2;UBERON:0000412,8.00e-18,3;UBERON:0001992,8.00e-18,3;UBERON:0006853,9.46e-18,3;UBERON:0007685,9.46e-18,3;UBERON:0004134,9.46e-18,3;UBERON:0004821,1.12e-17,3;UBERON:0003215,1.12e-17,3;UBERON:0010368,1.12e-17,3;UBERON:0009911,1.12e-17,3;UBERON:0002299,1.12e-17,3;UBERON:0006524,1.12e-17,3;UBERON:0008874,1.12e-17,3;UBERON:0002169,1.12e-17,3;UBERON:0004894,1.12e-17,3;UBERON:0002073,2.94e-11,5;UBERON:0005086,2.94e-11,5;UBERON:0000473,1.49e-07,8;UBERON:0002067,7.91e-07,9;UBERON:0004016,7.91e-07,9;UBERON:0010083,7.91e-07,9 | |||
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|short_description=p@chr7:140225639..140225651,- | |||
}} | }} |
Latest revision as of 06:42, 31 July 2015
Short description: | p@chr7:140225639..140225651, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:140225639..140225651, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 8.00e-18 | 3 |
stem cell of epidermis | 8.00e-18 | 3 |
brush border epithelial cell | 9.46e-18 | 3 |
kidney cortex tubule cell | 9.46e-18 | 3 |
epithelial cell of proximal tubule | 9.46e-18 | 3 |
pneumocyte | 1.12e-17 | 3 |
hair follicle cell | 2.94e-11 | 5 |
germ line cell | 1.89e-08 | 7 |
germ cell | 1.89e-08 | 7 |
epithelial cell of tracheobronchial tree | 8.85e-07 | 9 |
epithelial cell of lower respiratory tract | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 9.18e-26 | 2 |
alveolar duct | 9.18e-26 | 2 |
bronchiole | 9.18e-26 | 2 |
dermal papilla | 8.00e-18 | 3 |
papillary layer of dermis | 8.00e-18 | 3 |
renal cortex tubule | 9.46e-18 | 3 |
region of nephron tubule | 9.46e-18 | 3 |
proximal tubule | 9.46e-18 | 3 |
pulmonary alveolus epithelium | 1.12e-17 | 3 |
alveolus | 1.12e-17 | 3 |
pulmonary lobule | 1.12e-17 | 3 |
lobule | 1.12e-17 | 3 |
alveolus of lung | 1.12e-17 | 3 |
alveolar system | 1.12e-17 | 3 |
pulmonary acinus | 1.12e-17 | 3 |
alveolar sac | 1.12e-17 | 3 |
alveolar wall | 1.12e-17 | 3 |
hair follicle | 2.94e-11 | 5 |
hair follicle placode | 2.94e-11 | 5 |
testis | 1.49e-07 | 8 |
dermis | 7.91e-07 | 9 |
dermatome | 7.91e-07 | 9 |
future dermis | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 9.18e-26 | 2 |
non-small cell lung carcinoma | 3.60e-11 | 5 |
bronchus cancer | 2.35e-08 | 7 |
bronchogenic carcinoma | 2.35e-08 | 7 |
lung carcinoma | 8.85e-07 | 9 |