FFCP PHASE1:Hg19::chr7:105318442..105318495,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:105318442..105318495,- to FFCP PHASE1:Hg19::chr7:105318442..105318495,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=222255 | |EntrezGene=222255 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22210 | |HGNC=22210 | ||
|TSSclassifier=strong | |||
|UniProt=F8WDE7 | |UniProt=F8WDE7 | ||
|association_with_transcript=0bp_to_ENST00000472910,ENST00000474433,uc003vdh.3,uc011klr.1_5end | |||
|cluster_id=chr7:105318442..105318495,- | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_4_at_ATXN7L1_5end | |||
|id=chr7:105318442..105318495,- | |||
|ontology_enrichment_celltype=CL:0000037!1.78e-77!172;CL:0000566!1.78e-77!172;CL:0000988!1.22e-74!182;CL:0002032!1.23e-71!165;CL:0000837!1.23e-71!165;CL:0000738!1.06e-69!140;CL:0002031!1.80e-59!124;CL:0002087!4.84e-59!119;CL:0000763!6.45e-35!112;CL:0000049!6.45e-35!112;CL:0000542!3.72e-34!53;CL:0000051!3.72e-34!53;CL:0000838!3.58e-33!52;CL:0000766!8.34e-27!76;CL:0000839!2.29e-25!70;CL:0000557!8.20e-25!71;CL:0002194!6.87e-22!63;CL:0000576!6.87e-22!63;CL:0000040!6.87e-22!63;CL:0000559!6.87e-22!63;CL:0002009!7.56e-22!65;CL:0000084!2.57e-19!25;CL:0000827!2.57e-19!25;CL:0002057!1.43e-15!42;CL:0000134!3.48e-15!358;CL:0002320!4.05e-14!365;CL:0000860!9.12e-14!45;CL:0000791!2.50e-13!18;CL:0000789!2.50e-13!18;CL:0002420!2.50e-13!18;CL:0002419!2.50e-13!18;CL:0000790!2.50e-13!18;CL:0000945!1.41e-12!24;CL:0000826!1.41e-12!24;CL:0000219!8.09e-11!390;CL:0000236!7.75e-09!14;CL:0000625!9.80e-08!11;CL:0000048!8.02e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.67e-24;25!CL:0000542;5.16e-21;53!CL:0000791;4.64e-16;18!CL:0000789;4.64e-16;18!CL:0002419;4.64e-16;18!CL:0002087;1.66e-14;104!CL:0000738;1.91e-14;136!CL:0000945;3.36e-11;24!CL:0000988;4.16e-11;177!CL:0000235;3.81e-09;6!CL:0000625;1.09e-08;11!CL:0000097;4.64e-08;5!CL:0000236;6.12e-08;13!CL:0000624;1.68e-07;6!CL:0000766;3.93e-07;69!CL:0000763;6.02e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.06e-59,136;CL:0000037,7.82e-59,168;CL:0000988,3.78e-56,177;CL:0002032,2.20e-55,161;CL:0000837,2.20e-55,161;CL:0002031,9.55e-50,120;CL:0002087,1.73e-49,115;CL:0000542,1.08e-38,53;CL:0000051,1.08e-38,53;CL:0000838,3.58e-37,52;CL:0000084,3.21e-24,25;CL:0000827,3.21e-24,25;CL:0000763,7.49e-20,108;CL:0000049,7.49e-20,108;CL:0000766,1.30e-16,72;CL:0000791,3.26e-16,18;CL:0000789,3.26e-16,18;CL:0002420,3.26e-16,18;CL:0002419,3.26e-16,18;CL:0000790,3.26e-16,18;CL:0000557,1.17e-15,67;CL:0000134,3.26e-15,354;CL:0000839,6.22e-15,66;CL:0002320,1.78e-14,361;CL:0000219,6.51e-12,386;CL:0002009,8.59e-12,61;CL:0002194,1.96e-11,59;CL:0000576,1.96e-11,59;CL:0000040,1.96e-11,59;CL:0000559,1.96e-11,59;CL:0000945,4.50e-11,24;CL:0000826,4.50e-11,24;CL:0000235,3.87e-09,6;CL:0000236,4.85e-09,14;CL:0000048,7.32e-09,427;CL:0000625,7.94e-09,11;CL:0000473,1.16e-08,48;CL:0000234,1.16e-08,48;CL:0000723,1.88e-08,433;CL:0000034,2.52e-08,441;CL:0000097,3.03e-08,5;CL:0002028,3.03e-08,5;CL:0000624,1.68e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000051;5.16e-21;53!CL:0000790;4.64e-16;18 | |||
|ontology_enrichment_disease=DOID:2531!3.99e-20!51;DOID:0060083!3.99e-20!51;DOID:1240!6.60e-15!39;DOID:8692!6.90e-09!31;DOID:0060058!9.84e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:2531;1.42e-10;51!DOID:0060083;1.42e-10;51!DOID:0060058;1.89e-10;10!DOID:1240;4.30e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.31e-18,51;DOID:0060083,3.31e-18,51;DOID:1240,5.44e-12,39;DOID:0060058,3.02e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.47e-36!102;UBERON:0003061!1.47e-36!102;UBERON:0002193!5.38e-33!112;UBERON:0002371!4.75e-22!80;UBERON:0001474!7.54e-20!86;UBERON:0002405!3.02e-18!115;UBERON:0004765!4.24e-14!101;UBERON:0001434!4.24e-14!101;UBERON:0002384!4.06e-13!375;UBERON:0000178!9.91e-11!15;UBERON:0000179!9.91e-11!15;UBERON:0000463!9.91e-11!15;UBERON:0003081!4.00e-08!216;UBERON:0004177!2.10e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.52e-13;15!UBERON:0000179;1.52e-13;15!UBERON:0000463;1.52e-13;15!UBERON:0002390;3.21e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.18e-29,98;UBERON:0003061,2.18e-29,98;UBERON:0002193,1.77e-26,108;UBERON:0002405,7.71e-17,93;UBERON:0002371,7.16e-14,76;UBERON:0002384,1.77e-13,371;UBERON:0000178,2.13e-13,15;UBERON:0000179,2.13e-13,15;UBERON:0000463,2.13e-13,15;UBERON:0001474,3.23e-12,82;UBERON:0004765,2.24e-10,90;UBERON:0004177,4.44e-09,7;UBERON:0005057,4.44e-09,7;UBERON:0002370,8.06e-09,4;UBERON:0005058,8.06e-09,4;UBERON:0009113,8.06e-09,4;UBERON:0003295,8.06e-09,4;UBERON:0005562,8.06e-09,4;UBERON:0001434,1.59e-08,100;UBERON:0003081,7.37e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.328402357799783,0,0.393364276848904,2.68680578668049,0.619264493264304,0,0,0,0.0774672005803016,1.13735385989937,0.880801318004542,2.76997704265939,3.60980005446255,1.73608696572681,1.34349284543955,3.2389366601898,2.83333124397605,2.18097358169347,0,2.91100873425379,1.16214518452842,0,0,0,0.768482119587302,0.236482229888585,0.344745680736619,0.645484683583826,0,0.376484679085209,0.272906150057846,0.224723484445085,1.22433556948361,0.641858054152187,1.91801137739712,0.329851300186716,0.398927315243264,0.852449501065388,5.5139755339431,1.70215567407342,3.73693349397345,0.251248665256743,0,0.868755378820466,6.65939452896706,6.62899744777616,6.0127853613768,0.633765858935825,0.212604299965044,0.419317291016752,0.673971786878971,0.600707571366025,0.803627933485401,0,0.39783335439818,0.547992461293902,1.75996244461323,0,2.66852776159066,0.426730222566507,1.60158394814405,1.14950487990897,1.32208974556972,1.90810750907073,0.569212969109448,1.76171156811282,0.764546456250458,0,0.560508562981536,1.05353633910031,2.16380747125216,3.53709686474248,3.90642848099067,1.33749196312542,0.32592226663359,0.946895611469467,0,5.34770193048833,2.3568472597987,1.99380505125259,0.812411591295047,3.45846563259323,3.12142434143708,2.30213066445147,2.76350017785848,3.18783394308558,0.296573126324121,0.535081656179426,1.04535523804977,8.3848913596199,4.59864592322305,5.15441168223945,2.78321661221453,0.318565414324097,0.651083453856419,1.90090408889675,1.95747654801105,3.4556385011693,3.74792179657038,3.07810427657222,0,2.41928091869679,5.61624411145365,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,7.72776545436505,0,0,0.324547393654683,0.870648686496336,0.664789802594326,1.66943437013739,0.571994910780128,0.74291500265913,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3609667836102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70838706696137,1.17002132569619,1.93220510975347,0,0,0,0,0,0,2.95597942737566,1.67292024625129,2.28060927094849,1.72943944100354,3.28230326908588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,1.50677127429638,2.10833939483032,0,0,0,0,0,0,18.3819636149385,3.74358444383662,4.09692392233083,2.05348858047597,0,0,0,0,0,2.99602809578873,0,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27444828735176,1.50999940573032,3.09509917629989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0,0,0,0,0.309123034943167,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,2.53723804616085,2.29391162142713,2.84823593587081,3.09701308095126,2.87953591160336,2.59389324477087,2.16012574895246,1.58625035258854,0,0,0,4.27347302789153,1.00988449083511,7.11418433484141,2.23196781820351,0.997896857164083,0.5745161103971,0.211673582723883,0.324621940274555,1.96558024679421,3.87998954356427,1.56679895773023,0,0.50787533340481,2.72999727676289,0,0.425846237690326,1.71752672377882,0.921722292925374,2.46043718681657,1.66849141711908,2.9308214310306,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0,0.586032717087576,0,9.47268766358566,0,0,0.296964680832639,0,0,0,0,0.329607748453519,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,2.04628948090749,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,3.2076507472158,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,3.06579894587209,1.56980256395025,0.831058409500782,0,0,0,0,2.06617552674492,0,0,0,0,0,0.0884575645033392,0,2.07564790076435,0.741383633679017,0.730953646538188,0,0,0,5.29118888725431,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,7.88662062837944,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,1.35477331305255,0,0,0,0,0,1.1248694577575,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,1.23138781124008,0,0,0.146552233678082,1.32506888912221,0,0,0,0,0.747511887973863,0.314408610199332,0.414239055347196,0.992332043623902,0.790446527591777,4.26274094333136,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11776494143022,2.79016164658062,0.817826971279221,0,0,0,9.19942020932677,0.533458648470704,2.58322469491223,0,0,0,0.622077260032973,0,0,0,0,0.169732529954025,0,0.991486114072017,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0.527613733078862,0,0.535701835878287,0,0.606965604236632,0,0.354809480650555,2.07421177600403,0,0,0,0,0,0.1569861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| ||
|short_description=p4@ATXN7L1 | |||
}} | }} |
Latest revision as of 21:46, 24 September 2015
Short description: | p4@ATXN7L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ATXN7L1_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 0bp_to_ENST00000472910, ENST00000474433, uc003vdh.3, uc011klr.1_5end |
EntrezGene: | ATXN7L1 |
HGNC: | 22210 |
UniProt: | F8WDE7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.18e-29 | 98 |
blood island | 2.18e-29 | 98 |
hemolymphoid system | 1.77e-26 | 108 |
immune system | 7.71e-17 | 93 |
bone marrow | 7.16e-14 | 76 |
connective tissue | 1.77e-13 | 371 |
blood | 2.13e-13 | 15 |
haemolymphatic fluid | 2.13e-13 | 15 |
organism substance | 2.13e-13 | 15 |
bone element | 3.23e-12 | 82 |
skeletal element | 2.24e-10 | 90 |
hemopoietic organ | 4.44e-09 | 7 |
immune organ | 4.44e-09 | 7 |
thymus | 8.06e-09 | 4 |
hemolymphoid system gland | 8.06e-09 | 4 |
thymic region | 8.06e-09 | 4 |
pharyngeal gland | 8.06e-09 | 4 |
thymus primordium | 8.06e-09 | 4 |
skeletal system | 1.59e-08 | 100 |
lateral plate mesoderm | 7.37e-08 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.31e-18 | 51 |
immune system cancer | 3.31e-18 | 51 |
leukemia | 5.44e-12 | 39 |
lymphoma | 3.02e-10 | 10 |