FFCP PHASE1:Hg19::chr7:100781146..100781169,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:100781146..100781169,+ to FFCP PHASE1:Hg19::chr7:100781146..100781169,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:100781146..100781169,+ | |||
|coexpression_cluster_id=C4633 | |||
|description=CAGE_peak_at_chr7:100781146..100781169,+ | |||
|id=chr7:100781146..100781169,+ | |||
|ontology_enrichment_celltype=CL:0000222!5.28e-28!119;CL:0000055!3.57e-21!180;CL:0000680!9.42e-21!57;CL:0000056!9.42e-21!57;CL:0000355!9.42e-21!57;CL:0000359!2.68e-20!32;CL:0000187!2.28e-19!54;CL:0000183!1.52e-18!59;CL:0000192!3.07e-18!42;CL:0000514!3.07e-18!42;CL:0000393!6.82e-16!60;CL:0000211!6.82e-16!60;CL:0000220!2.92e-15!246;CL:0002321!7.13e-15!248;CL:0000144!1.29e-14!625;CL:0002371!2.41e-13!591;CL:0000548!3.99e-12!679;CL:0000004!3.99e-12!679;CL:0000255!3.99e-12!679;CL:0000012!8.92e-12!682;CL:0002139!2.91e-10!24;CL:0000115!4.04e-09!35;CL:0002539!4.47e-09!10;CL:0000213!4.97e-09!57;CL:0000215!4.97e-09!57;CL:0002078!4.89e-08!44;CL:0000057!1.30e-07!75;CL:0000003!1.67e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.31e-20;32!CL:0000192;1.07e-11;43!CL:0000187;9.06e-11;55!CL:0002592;5.26e-10;3!CL:0002541;1.12e-09;3!CL:0002595;2.47e-09;5!CL:0002188;6.90e-09;5!CL:0000393;7.06e-09;61!CL:0000211;7.06e-09;61!CL:0002539;3.65e-07;10!CL:0002593;3.82e-07;2!CL:0002594;5.54e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,9.54e-22,32;CL:0000222,2.92e-19,121;CL:0000680,7.37e-18,58;CL:0000056,7.37e-18,58;CL:0000355,7.37e-18,58;CL:0000187,2.55e-17,55;CL:0000192,4.43e-17,43;CL:0000514,4.43e-17,43;CL:0000393,4.57e-15,61;CL:0000211,4.57e-15,61;CL:0002592,7.32e-10,3;CL:0002541,1.34e-09,3;CL:0002595,3.65e-09,5;CL:0002188,7.25e-09,5;CL:0002539,3.30e-07,10;CL:0002593,4.52e-07,2;CL:0002594,5.69e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;1.07e-11;43!CL:0000355;9.67e-11;58 | |||
|ontology_enrichment_disease=DOID:2394!7.25e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.87e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.56e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000055!6.72e-31!69;UBERON:0002049!1.12e-30!79;UBERON:0007798!1.12e-30!79;UBERON:0001981!7.51e-26!60;UBERON:0007500!7.51e-26!60;UBERON:0004537!7.51e-26!60;UBERON:0006965!7.51e-26!60;UBERON:0001637!5.49e-25!42;UBERON:0003509!5.49e-25!42;UBERON:0004572!5.49e-25!42;UBERON:0004535!2.37e-23!110;UBERON:0003914!4.79e-23!118;UBERON:0001009!8.18e-23!113;UBERON:0004872!1.76e-22!84;UBERON:0004573!1.85e-22!33;UBERON:0004571!1.85e-22!33;UBERON:0004290!1.59e-18!70;UBERON:0001134!2.66e-18!61;UBERON:0002036!2.66e-18!61;UBERON:0003082!2.66e-18!61;UBERON:0000490!1.91e-17!138;UBERON:0000486!1.96e-17!82;UBERON:0002385!3.33e-17!63;UBERON:0001015!3.33e-17!63;UBERON:0000383!3.33e-17!63;UBERON:0000914!3.74e-15!83;UBERON:0002329!3.74e-15!83;UBERON:0003077!3.74e-15!83;UBERON:0003059!3.74e-15!83;UBERON:0007282!3.74e-15!83;UBERON:0009618!3.74e-15!83;UBERON:0007285!3.74e-15!83;UBERON:0000947!2.10e-14!21;UBERON:0010191!2.10e-14!21;UBERON:0005256!2.88e-13!143;UBERON:0002100!1.34e-10!216;UBERON:0004237!4.47e-09!10;UBERON:0004695!4.47e-09!10;UBERON:0002111!4.47e-09!10;UBERON:0004178!4.47e-09!10;UBERON:0000119!7.94e-09!312;UBERON:0000483!3.14e-08!309;UBERON:0000025!7.15e-08!194;UBERON:0001473!2.24e-07!8;UBERON:0004536!2.24e-07!8;UBERON:0006558!2.24e-07!8;UBERON:0004111!7.83e-07!241;UBERON:0001135!9.67e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.64e-20;33!UBERON:0004571;2.64e-20;33!UBERON:0001637;1.22e-17;42!UBERON:0003509;1.22e-17;42!UBERON:0004572;1.22e-17;42!UBERON:0000055;1.11e-13;65!UBERON:0007500;8.23e-11;56!UBERON:0001981;8.23e-11;56!UBERON:0004537;8.23e-11;56!UBERON:0003513;4.29e-10;7!UBERON:0003498;5.26e-10;3!UBERON:0005985;5.26e-10;3!UBERON:0001621;5.26e-10;3!UBERON:0003124;1.12e-09;3!UBERON:0000920;1.12e-09;3!UBERON:0000947;1.92e-09;21!UBERON:0010191;1.92e-09;21!UBERON:0003834;2.47e-09;5!UBERON:0001533;2.47e-09;5!UBERON:0002049;1.35e-08;75!UBERON:0007798;1.35e-08;75!UBERON:0003914;1.94e-08;74!UBERON:0004237;3.65e-07;10!UBERON:0004695;3.65e-07;10!UBERON:0002111;3.65e-07;10!UBERON:0004178;3.65e-07;10!UBERON:0002456;3.82e-07;2!UBERON:0001310;5.54e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.12e-24,42;UBERON:0003509,2.12e-24,42;UBERON:0004572,2.12e-24,42;UBERON:0004573,1.95e-23,33;UBERON:0004571,1.95e-23,33;UBERON:0000055,1.94e-21,68;UBERON:0007503,6.12e-19,78;UBERON:0002049,8.85e-18,78;UBERON:0007798,8.85e-18,78;UBERON:0007500,1.43e-17,59;UBERON:0001981,1.43e-17,59;UBERON:0004537,1.43e-17,59;UBERON:0006965,1.43e-17,59;UBERON:0001134,2.51e-16,62;UBERON:0002036,2.51e-16,62;UBERON:0003082,2.51e-16,62;UBERON:0003914,5.29e-16,117;UBERON:0002385,1.24e-15,64;UBERON:0001015,1.24e-15,64;UBERON:0000383,1.24e-15,64;UBERON:0005256,6.02e-15,122;UBERON:0002329,6.41e-15,71;UBERON:0003059,6.41e-15,71;UBERON:0007282,6.41e-15,71;UBERON:0004290,6.41e-15,71;UBERON:0009618,6.41e-15,71;UBERON:0003077,1.25e-14,72;UBERON:0007285,1.25e-14,72;UBERON:0007524,2.40e-14,73;UBERON:0004872,2.71e-13,83;UBERON:0004535,5.87e-13,109;UBERON:0001009,2.03e-12,112;UBERON:0000486,6.65e-12,83;UBERON:0003104,3.16e-11,160;UBERON:0009142,3.16e-11,160;UBERON:0000490,5.31e-11,148;UBERON:0003513,5.20e-10,7;UBERON:0001621,7.32e-10,3;UBERON:0000920,1.34e-09,3;UBERON:0000947,2.21e-09,21;UBERON:0010191,2.21e-09,21;UBERON:0003834,3.65e-09,5;UBERON:0001533,3.65e-09,5;UBERON:0002100,2.06e-07,199;UBERON:0004237,3.30e-07,10;UBERON:0004695,3.30e-07,10;UBERON:0002111,3.30e-07,10;UBERON:0004178,3.30e-07,10;UBERON:0000926,4.34e-07,315;UBERON:0004120,4.34e-07,315;UBERON:0006603,4.34e-07,315;UBERON:0002456,4.52e-07,2;UBERON:0001310,5.69e-07,4 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,2.61701557230111,0,2.52687949370732,0,0.982935746006035,0,0.218441372130172,0.527533956456907,0,0,2.6893005858071,0.602694528023977,0.730310090387373,1.46379839637152,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0.50133791063589,0.144846518960824,0.795285947051099,1.45990461090791,0.0945348171640679,0.665188192387692,0.263504357079378,0,0,0,0,0,0,0.238490624305342,0,0,0.39752481473341,2.58070378531837,2.42998351125316,0.56530794192401,0,0.275118041940067,0.417989933073621,0.516833518338658,0.71153252537342,0.33472061276467,0.805658634218294,0.760272105718513,0,0.735326160691737,0.81014194788176,0.267899184852239,0.673588117878509,0.563057402416611,0,0,0.183201743930407,0,0,0,2.98183171017191,1.2663051166458,1.05927344650575,0.573673241497627,0,0,1.06748995729705,0.98667019366864,0.622422070799533,0.808264032418128,0.653847612453835,0,0,0,0,1.1409436430889,0.149448680551801,0,0.485618833104395,0.280901613404497,0,0,0,0,0,2.73048408581408,0.718618141816238,0,0,0,0,0.30648779579902,0.45071417671979,0.680593098960126,0.358779271377724,0.427114777637135,0.635795703478686,0.300091096084402,0.412210116953756,0,0.37223371266318,1.35021065793013,0.194874010322397,0,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0.8231480226628,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,2.23076519048061,2.30986316417718,2.77791307545966,1.33177906564219,0,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.22001485746285,1.03417372606222,0,0,0,0,0,0,0.266422179016099,0.857867961948885,0,3.29296134712308,0.977208552881205,0,0.791951872933429,1.80863626235752,1.74306691720059,0.99972991182057,0,0,0,0.958499421966331,0,1.42636905040718,1.30303176000821,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.713715955188647,0.157702415033935,0.585707074963566,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,0.767309866440312,0.280660094433074,0.384417447767103,0.511707249066704,1.44768529029247,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,1.00253235151642,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,1.13733384070897,1.19065593693561,2.59099099322567,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0.512900250232778,0,0.650756789328606,0.309123034943167,0,0,0,0,0,0.096670718292122,0.308097234229289,0,1.10269257987624,0.214840489736547,0.145016693914229,0.255679882248303,0,0.165284915360978,0.960950336825531,0.382838137483752,0.10115778085555,0.464845549297286,3.46293581513704,0.6970372701606,0.616067160352178,2.12922412126809,3.47973196830029,1.29726953372744,1.86062352764589,0,0.632758849437452,0.571890581771475,0,0.42793898803392,0.318203247925937,0.78494864019923,0.179872457583315,0,0.117812402345686,3.03273722359974,7.92551605865041,2.10629228119491,0.975267478179181,2.19342140668156,4.22600587027022,0.136499911407986,0,0,1.10273068709225,0,1.31535265576129,2.31510213706675,0,2.02910376962704,1.54911749049875,0.281695602532241,0.573645408816206,0.982490410131212,2.1400263088875,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0.43050537267123,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13654458722565,0.71623345421307,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,4.66559381492711,0,0,0,0,0,3.33410970433911,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,5.42301971544263,1.19076871422421,5.86338253620498,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.261177619741208,0,0.51595809741485,0,0,0,0,0,0,0.274083849293502,0,0,0,0.801588202515337,0,0.19980960958213,0,0,0,0,0,0,0.271808412147228,0.418411385249333,0,0,0,0,0,1.28929632425987,0,0.279282401272254,0,0,0.199679000498991,0,0,0,6.12509802022086,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,1.5476039091159,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0.25426853765475,0,1.72844298240254,0,0,0,0.340776043570843,0,0.146552233678082,1.32506888912221,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0.705797459094515,0,0,0.149254802886874,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0.147855149989634,0.796483835818512,0.449803112163605,1.08684069813382,0,1.06336685823198,0.521745061811734,1.6528336989694,1.52322084867518,1.62748293281865,0.363697318405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| ||
|short_description=p@chr7:100781146..100781169,+ | |||
}} | }} |
Latest revision as of 04:17, 31 July 2015
Short description: | p@chr7:100781146..100781169, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:100781146..100781169, + |
Coexpression cluster: | C4633_hepatic_spindle_chorionic_bone_Smooth_Fibroblast_basal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 9.54e-22 | 32 |
mesodermal cell | 2.92e-19 | 121 |
muscle precursor cell | 7.37e-18 | 58 |
myoblast | 7.37e-18 | 58 |
multi-potent skeletal muscle stem cell | 7.37e-18 | 58 |
muscle cell | 2.55e-17 | 55 |
smooth muscle cell | 4.43e-17 | 43 |
smooth muscle myoblast | 4.43e-17 | 43 |
electrically responsive cell | 4.57e-15 | 61 |
electrically active cell | 4.57e-15 | 61 |
smooth muscle cell of the coronary artery | 7.32e-10 | 3 |
chorionic membrane mesenchymal stem cell | 1.34e-09 | 3 |
smooth muscle cell of the subclavian artery | 3.65e-09 | 5 |
glomerular endothelial cell | 7.25e-09 | 5 |
aortic smooth muscle cell | 3.30e-07 | 10 |
smooth muscle cell of the internal thoracic artery | 4.52e-07 | 2 |
smooth muscle cell of the umbilical artery | 5.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.56e-08 | 14 |