FFCP PHASE1:Hg19::chr6:94129359..94129404,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:94129359..94129404,- to FFCP PHASE1:Hg19::chr6:94129359..94129404,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2045 | |EntrezGene=2045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3390 | |HGNC=3390 | ||
|TSSclassifier=strong | |||
|UniProt=Q15375 | |UniProt=Q15375 | ||
|association_with_transcript=-59bp_to_NM_004440,uc003poe.2,uc003pof.2,uc003pog.3,uc011eac.1_5end | |||
|cluster_id=chr6:94129359..94129404,- | |||
|coexpression_cluster_id=C112 | |||
|description=CAGE_peak_3_at_EPHA7_5end | |||
|id=chr6:94129359..94129404,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.96e-12;2!CL:0002549;2.90e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002549,3.24e-12,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.68e-42!82;UBERON:0005743!7.59e-40!86;UBERON:0000073!4.89e-38!94;UBERON:0001016!4.89e-38!94;UBERON:0000955!1.73e-36!69;UBERON:0006238!1.73e-36!69;UBERON:0002616!3.68e-36!59;UBERON:0001049!1.38e-35!57;UBERON:0005068!1.38e-35!57;UBERON:0006241!1.38e-35!57;UBERON:0007135!1.38e-35!57;UBERON:0002780!1.23e-31!41;UBERON:0001890!1.23e-31!41;UBERON:0006240!1.23e-31!41;UBERON:0003080!1.12e-30!42;UBERON:0003075!3.67e-27!86;UBERON:0007284!3.67e-27!86;UBERON:0002346!7.52e-27!90;UBERON:0007023!6.17e-26!115;UBERON:0001893!8.39e-26!34;UBERON:0001869!1.43e-25!32;UBERON:0002791!1.25e-24!33;UBERON:0002020!1.03e-23!34;UBERON:0003528!1.03e-23!34;UBERON:0003056!6.66e-20!61;UBERON:0000153!1.16e-19!129;UBERON:0007811!1.16e-19!129;UBERON:0000924!1.98e-19!173;UBERON:0006601!1.98e-19!173;UBERON:0004121!2.68e-19!169;UBERON:0000033!3.55e-19!123;UBERON:0002619!8.26e-19!22;UBERON:0001950!2.31e-18!20;UBERON:0000956!4.97e-18!25;UBERON:0000203!4.97e-18!25;UBERON:0001872!5.75e-10!5;UBERON:0009663!2.01e-09!7;UBERON:0002420!2.41e-09!9;UBERON:0007245!2.41e-09!9;UBERON:0010009!2.41e-09!9;UBERON:0010011!2.41e-09!9;UBERON:0000454!2.41e-09!9;UBERON:0000369!9.78e-09!4;UBERON:0002435!9.78e-09!4;UBERON:0000204!9.78e-09!4;UBERON:0010082!9.78e-09!4;UBERON:0000475!3.56e-08!365;UBERON:0000025!1.33e-07!194;UBERON:0000922!2.83e-07!612;UBERON:0001894!3.11e-07!7;UBERON:0006222!3.11e-07!7;UBERON:0002308!4.01e-07!9;UBERON:0000125!4.01e-07!9;UBERON:0001871!4.61e-07!7;UBERON:0005383!4.76e-07!3;UBERON:0005382!4.76e-07!3;UBERON:0000477!5.97e-07!286;UBERON:0000200!7.08e-07!6;UBERON:0002240!9.89e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.90e-12;2!UBERON:0005629;2.90e-12;2!UBERON:0002757;2.90e-12;2!UBERON:0010134;2.90e-12;2!UBERON:0005358;2.90e-12;2!UBERON:0005408;2.90e-12;2!UBERON:0001886;2.90e-12;2!UBERON:0004086;2.90e-12;2!UBERON:0001899;2.90e-12;2!UBERON:0005282;2.90e-12;2!UBERON:0005281;2.90e-12;2!UBERON:0002369;8.96e-09;3!UBERON:0001235;8.96e-09;3!UBERON:0006858;8.96e-09;3!UBERON:0002114;1.30e-08;2!UBERON:0003296;9.10e-07;4!UBERON:0010133;9.10e-07;4!UBERON:0002784;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,3.24e-12,2;UBERON:0005358,3.24e-12,2;UBERON:0001886,3.24e-12,2;UBERON:0004086,3.24e-12,2;UBERON:0005282,3.24e-12,2;UBERON:0005281,3.24e-12,2;UBERON:0001905,3.62e-12,2;UBERON:0002757,3.62e-12,2;UBERON:0010134,3.62e-12,2;UBERON:0005408,3.62e-12,2;UBERON:0001899,3.62e-12,2;UBERON:0002369,8.96e-09,3;UBERON:0001235,8.96e-09,3;UBERON:0006858,8.96e-09,3;UBERON:0002114,1.30e-08,2;UBERON:0001017,8.95e-07,81 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.302714855289863,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464775771478074,0,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0,2.60279707715243,0,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94666556572616,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,1.99613798001194,0,0,0,0,0,0,0,0,0.173624994933292,0.885741385813839,0.964771509003264,0,0.774054819518572,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0.937057782901357,0,0,0,0,0,0.30607276163049,0,0.901940516486955,0.518440956986236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0.316553979779393,0,0,0,0,0,7.44487875078452,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,1.5256112259285,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.250381861413,0,0.110929051536852,0.248385611765534,0.138348634936231,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0.260994291965212,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.449604575675217,0,0.319267718114302,0,0.756215088665154,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0.781078098613847,0.206686796501184,0.317079050969534,2.7348740450911,0,0,0,0,1.07140367175657,0.336283722218824,0,0.455324382702595,0,0,0,0.271878931907327,0.328863867814245,0,0,0.313972371402056,0.471346769748006,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0.245148321753905,0,0.588925401344836,0.297046400327086,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0.203974470572744,1.30905207102113,0,0,0,0,0.883164973845552,0.218531143927391,0,0,0,0.275684698604535,0,0.0757786982182394,0,0,0.413731983447581,0.213233981900981,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0.302714855289863,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464775771478074,0,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0,2.60279707715243,0,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94666556572616,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,1.99613798001194,0,0,0,0,0,0,0,0,0.173624994933292,0.885741385813839,0.964771509003264,0,0.774054819518572,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0.937057782901357,0,0,0,0,0,0.30607276163049,0,0.901940516486955,0.518440956986236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0.316553979779393,0,0,0,0,0,7.44487875078452,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,1.5256112259285,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.250381861413,0,0.110929051536852,0.248385611765534,0.138348634936231,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0.260994291965212,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.449604575675217,0,0.319267718114302,0,0.756215088665154,0.138314504928436,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0.781078098613847,0.206686796501184,0.317079050969534,2.7348740450911,0,0,0,0,1.07140367175657,0.336283722218824,0,0.455324382702595,0,0,0,0.271878931907327,0.328863867814245,0,0,0.313972371402056,0.471346769748006,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0.245148321753905,0,0.588925401344836,0.297046400327086,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0.203974470572744,1.30905207102113,0,0,0,0,0.883164973845552,0.218531143927391,0,0,0,0.275684698604535,0,0.0757786982182394,0,0,0.413731983447581,0.213233981900981,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p3@EPHA7 | |||
}} | }} |
Latest revision as of 04:51, 20 September 2015
Short description: | p3@EPHA7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EPHA7_5end |
Coexpression cluster: | C112_gastric_pancreas_temporal_duodenum_small_extraskeletal_adrenal |
Association with transcript: | -59bp_to_NM_004440, uc003poe.2, uc003pof.2, uc003pog.3, uc011eac.1_5end |
EntrezGene: | EPHA7 |
HGNC: | 3390 |
UniProt: | Q15375 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 3.24e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 3.24e-12 | 2 |
ventricle of nervous system | 3.24e-12 | 2 |
choroid plexus | 3.24e-12 | 2 |
brain ventricle | 3.24e-12 | 2 |
ventricular system of brain | 3.24e-12 | 2 |
ventricular system of central nervous system | 3.24e-12 | 2 |
pineal body | 3.62e-12 | 2 |
regional part of epithalamus | 3.62e-12 | 2 |
secretory circumventricular organ | 3.62e-12 | 2 |
circumventricular organ | 3.62e-12 | 2 |
epithalamus | 3.62e-12 | 2 |
adrenal gland | 8.96e-09 | 3 |
adrenal cortex | 8.96e-09 | 3 |
adrenal/interrenal gland | 8.96e-09 | 3 |
duodenum | 1.30e-08 | 2 |
central nervous system | 8.95e-07 | 81 |