FFCP PHASE1:Hg19::chr6:88876353..88876383,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:88876353..88876383,- to FFCP PHASE1:Hg19::chr6:88876353..88876383,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1268 | |EntrezGene=1268 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2159 | |HGNC=2159 | ||
|TSSclassifier=strong | |||
|UniProt=P21554 | |UniProt=P21554 | ||
|association_with_transcript=-275bp_to_ENST00000369501_5end | |||
|cluster_id=chr6:88876353..88876383,- | |||
|coexpression_cluster_id=C2248 | |||
|description=CAGE_peak_4_at_CNR1_5end | |||
|id=chr6:88876353..88876383,- | |||
|ontology_enrichment_celltype=CL:0000128!8.18e-11!7;CL:0000126!8.18e-11!7;CL:0000127!8.18e-11!7;CL:0002453!8.18e-11!7;CL:0002319!1.18e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002605;2.44e-24;3!CL:0000128;4.37e-18;7!CL:0000126;4.37e-18;7!CL:0000127;4.37e-18;7!CL:0002561;1.27e-16;2!CL:0002602;1.80e-16;2!CL:0002319;3.10e-13;25!CL:0000095;4.62e-10;17!CL:0000362;2.83e-08;9!CL:0000243;1.54e-07;15!CL:0000125;1.54e-07;15!CL:0002559;3.57e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.09e-24,3;CL:0000128,4.01e-18,7;CL:0000126,4.01e-18,7;CL:0000127,4.01e-18,7;CL:0002453,4.01e-18,7;CL:0002602,1.00e-16,2;CL:0002561,1.37e-16,2;CL:0002319,3.29e-13,25;CL:0000095,4.90e-10,17;CL:0000123,4.90e-10,17;CL:0000362,3.29e-08,9;CL:0000243,1.49e-07,15;CL:0000125,1.49e-07,15;CL:0000030,1.49e-07,15;CL:0000339,1.49e-07,15;CL:0002559,3.68e-07,5;CL:0000221,4.28e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000339;1.54e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;7.26e-09;1!DOID:0060061;7.26e-09;1!DOID:8691;7.26e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,5.31e-09,1;DOID:0060061,5.31e-09,1;DOID:8691,5.31e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!6.10e-29!82;UBERON:0005743!5.36e-28!86;UBERON:0000073!4.07e-25!94;UBERON:0001016!4.07e-25!94;UBERON:0001049!5.08e-25!57;UBERON:0005068!5.08e-25!57;UBERON:0006241!5.08e-25!57;UBERON:0007135!5.08e-25!57;UBERON:0002616!5.09e-25!59;UBERON:0000955!9.53e-22!69;UBERON:0006238!9.53e-22!69;UBERON:0003075!5.00e-18!86;UBERON:0007284!5.00e-18!86;UBERON:0002780!7.80e-18!41;UBERON:0001890!7.80e-18!41;UBERON:0006240!7.80e-18!41;UBERON:0003080!3.33e-17!42;UBERON:0002346!1.29e-16!90;UBERON:0002020!2.57e-16!34;UBERON:0003528!2.57e-16!34;UBERON:0001893!3.27e-16!34;UBERON:0002791!2.33e-15!33;UBERON:0001869!8.04e-15!32;UBERON:0007023!5.81e-13!115;UBERON:0004121!2.17e-12!169;UBERON:0000033!2.55e-12!123;UBERON:0003056!5.73e-12!61;UBERON:0000924!1.01e-11!173;UBERON:0006601!1.01e-11!173;UBERON:0000153!1.11e-11!129;UBERON:0007811!1.11e-11!129;UBERON:0000956!3.93e-10!25;UBERON:0000203!3.93e-10!25;UBERON:0003076!4.03e-09!15;UBERON:0003057!4.03e-09!15;UBERON:0002420!8.27e-09!9;UBERON:0007245!8.27e-09!9;UBERON:0010009!8.27e-09!9;UBERON:0010011!8.27e-09!9;UBERON:0000454!8.27e-09!9;UBERON:0004733!2.94e-08!12;UBERON:0002028!2.94e-08!12;UBERON:0007277!2.94e-08!12;UBERON:0002308!3.28e-08!9;UBERON:0000125!3.28e-08!9;UBERON:0001950!3.52e-08!20;UBERON:0004732!1.90e-07!13;UBERON:0002619!3.65e-07!22;UBERON:0002680!5.32e-07!9;UBERON:0001895!5.32e-07!9;UBERON:0010092!5.32e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0005933;1.27e-16;2!UBERON:0005942;1.27e-16;2!UBERON:0005932;1.27e-16;2!UBERON:0006444;1.80e-16;2!UBERON:0001995;1.80e-16;2!UBERON:0004715;1.80e-16;2!UBERON:0011135;1.42e-14;5!UBERON:0002216;1.42e-14;5!UBERON:0011134;1.42e-14;5!UBERON:0002209;1.42e-14;5!UBERON:0002213;1.42e-14;5!UBERON:0007844;1.42e-14;5!UBERON:0011138;1.42e-14;5!UBERON:0001130;1.42e-14;5!UBERON:0001066;1.42e-14;5!UBERON:0001468;1.42e-14;5!UBERON:0002418;2.71e-11;3!UBERON:0004755;2.71e-11;3!UBERON:0004905;2.64e-09;8!UBERON:0000982;2.64e-09;8!UBERON:0004770;2.64e-09;8!UBERON:0002331;8.11e-08;10!UBERON:0002073;3.57e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006444,1.00e-16,2;UBERON:0001995,1.00e-16,2;UBERON:0004715,1.00e-16,2;UBERON:0005933,1.37e-16,2;UBERON:0005942,1.37e-16,2;UBERON:0005932,1.37e-16,2;UBERON:0011135,9.14e-15,5;UBERON:0002216,9.14e-15,5;UBERON:0011134,9.14e-15,5;UBERON:0002209,9.14e-15,5;UBERON:0002213,9.14e-15,5;UBERON:0005856,9.14e-15,5;UBERON:0005866,9.14e-15,5;UBERON:0005863,9.14e-15,5;UBERON:0007844,9.14e-15,5;UBERON:0011138,9.14e-15,5;UBERON:0001130,9.14e-15,5;UBERON:0001066,9.14e-15,5;UBERON:0001468,9.14e-15,5;UBERON:0002418,1.84e-11,3;UBERON:0004755,1.84e-11,3;UBERON:0004905,2.02e-09,8;UBERON:0000982,2.02e-09,8;UBERON:0004770,2.02e-09,8;UBERON:0002331,8.11e-08,10;UBERON:0000358,8.11e-08,10;UBERON:0000307,8.11e-08,10;UBERON:0000091,8.11e-08,10;UBERON:0000087,8.11e-08,10;UBERON:0007010,8.11e-08,10;UBERON:0007806,8.11e-08,10;UBERON:0008780,8.11e-08,10;UBERON:0005728,8.11e-08,10;UBERON:0001017,1.38e-07,81;UBERON:0002073,3.68e-07,5;UBERON:0005086,3.68e-07,5 | |||
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| ||
|short_description=p4@CNR1 | |||
}} | }} |
Latest revision as of 02:23, 20 September 2015
Short description: | p4@CNR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CNR1_5end |
Coexpression cluster: | C2248_anaplastic_cord_Mast_leukemia_mycosis_chronic_Fibroblast |
Association with transcript: | -275bp_to_ENST00000369501_5end |
EntrezGene: | CNR1 |
HGNC: | 2159 |
UniProt: | P21554 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.09e-24 | 3 |
oligodendrocyte | 4.01e-18 | 7 |
macroglial cell | 4.01e-18 | 7 |
astrocyte | 4.01e-18 | 7 |
oligodendrocyte precursor cell | 4.01e-18 | 7 |
annulus pulposus cell | 1.00e-16 | 2 |
outer root sheath cell | 1.37e-16 | 2 |
neural cell | 3.29e-13 | 25 |
neuron associated cell | 4.90e-10 | 17 |
neuron associated cell (sensu Vertebrata) | 4.90e-10 | 17 |
epidermal cell | 3.29e-08 | 9 |
glial cell (sensu Vertebrata) | 1.49e-07 | 15 |
glial cell | 1.49e-07 | 15 |
glioblast | 1.49e-07 | 15 |
glioblast (sensu Vertebrata) | 1.49e-07 | 15 |
hair follicle cell | 3.68e-07 | 5 |
ectodermal cell | 4.28e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 5.31e-09 | 1 |
cutaneous T cell lymphoma | 5.31e-09 | 1 |
mycosis fungoides | 5.31e-09 | 1 |