FFCP PHASE1:Hg19::chr6:82462435..82462450,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:82462435..82462450,- to FFCP PHASE1:Hg19::chr6:82462435..82462450,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55603 | |EntrezGene=55603 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18345 | |HGNC=18345 | ||
|TSSclassifier=strong | |||
|UniProt=Q96IP4 | |UniProt=Q96IP4 | ||
|association_with_transcript=-7bp_to_NM_017633,uc003pjg.2_5end | |||
|cluster_id=chr6:82462435..82462450,- | |||
|description=CAGE_peak_4_at_FAM46A_5end | |||
|id=chr6:82462435..82462450,- | |||
|ontology_enrichment_celltype=CL:0000839!2.19e-13!70;CL:0000557!3.26e-13!71;CL:0000766!8.60e-13!76;CL:0002009!1.76e-11!65;CL:0002194!3.19e-11!63;CL:0000576!3.19e-11!63;CL:0000040!3.19e-11!63;CL:0000559!3.19e-11!63;CL:0000763!5.15e-10!112;CL:0000049!5.15e-10!112;CL:0000738!2.85e-09!140;CL:0002031!7.24e-09!124;CL:0000860!2.23e-08!45;CL:0000037!7.04e-08!172;CL:0000566!7.04e-08!172;CL:0002087!2.64e-07!119;CL:0002032!2.68e-07!165;CL:0000837!2.68e-07!165;CL:0002057!4.51e-07!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.47e-12,72;CL:0000839,1.09e-11,66;CL:0000557,2.14e-11,67;CL:0002194,2.92e-09,59;CL:0000576,2.92e-09,59;CL:0000040,2.92e-09,59;CL:0000559,2.92e-09,59;CL:0000738,6.69e-09,136;CL:0002009,9.44e-09,61;CL:0002031,1.28e-08,120;CL:0000763,8.29e-08,108;CL:0000049,8.29e-08,108;CL:0000473,2.30e-07,48;CL:0000234,2.30e-07,48;CL:0000037,2.95e-07,168;CL:0002087,4.38e-07,115;CL:0002032,6.05e-07,161;CL:0000837,6.05e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.05e-11!102;UBERON:0003061!1.05e-11!102;UBERON:0002371!2.07e-11!80;UBERON:0001474!2.43e-10!86;UBERON:0004765!1.11e-09!101;UBERON:0001434!1.11e-09!101;UBERON:0002193!4.23e-09!112;UBERON:0002405!1.09e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;6.84e-08;4!UBERON:0010133;6.84e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.33e-10,98;UBERON:0003061,3.33e-10,98;UBERON:0002371,6.29e-10,76;UBERON:0001474,2.37e-09,82;UBERON:0002193,4.41e-09,108;UBERON:0007023,5.37e-09,114;UBERON:0002405,5.10e-08,93;UBERON:0004765,7.82e-08,90;UBERON:0001434,1.55e-07,100;UBERON:0003296,1.60e-07,4;UBERON:0010133,1.60e-07,4 | |||
|phase1_expression=0,0.856402095563933,0.563817616383885,0,0.893922188854576,0,0,0,0.522371256399677,0,0,0.218441372130172,0.527533956456907,0.37129905888014,0.331397375727916,0,0,0,0,0.246242116153576,0,0,0,0.684372125364421,0.125542639594803,1.29902789771517,1.23150884174919,1.18066171970519,0.393364276848904,0.383829398097213,1.39334510984468,0,0,0,0,0,0.293600439334847,0.553995408531877,1.20326668482085,0.868043482863407,2.23915474239924,1.29557466407592,1.80302897343931,0.581592955118259,0.377875943688809,0.485168122375632,0.232429036905685,0.411167888021826,0.309706370895104,0.575384784644301,0.256160706529101,0.709446689665756,0,0,1.35426486594342,0.188242339542605,0,0.449446968890169,1.22433556948361,0.641858054152187,1.27867425159808,2.63881040149373,1.79517291859469,2.98357325372886,1.45104619314292,0,0.622822248995575,1.25624332628372,0.521482918420201,1.08594422352558,3.02699751316684,1.10483290796269,0.949387162322653,0.633765858935825,1.06302149982522,0.209658645508376,1.01095768031846,1.20141514273205,0.964353520182481,1.42506371870624,0.79566670879636,0.730656615058536,1.75996244461323,1.09227722252426,0.889509253863555,0.853460445133014,1.20118796110804,1.72425731986345,0,0,0.569212969109448,0,0,1.32171328579026,0,0.263384084775077,0.196709770113833,0,0.822405995998037,0.167186495390678,0.651844533267181,0,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0.260118695119756,0,0,0,0.296573126324121,0,0,0.113309342697566,0,0,0.253019692019503,0,0.651083453856419,1.90090408889675,0,0.127986611154418,0,0.710331756132051,0,0.403213486449465,0.267440195783507,0.289648807765598,0,0,0.383587685530591,0.722878304769133,1.00267582127178,0.434539556882471,0,0.973269740605272,0.472674085820339,0,0.527008714158756,0.392937226493138,0,0,0,0.696518949197069,0.398873881556595,1.43094374583205,2.28797964312051,0.371457501329565,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0.760272105718513,0,0,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0.993943903390637,0.633152558322899,0.132409180813219,0.860509862246441,0,0.560677600142307,0,0.24666754841716,0.622422070799533,0.134710672069688,0.490385709340376,0.151357427644931,0,0,0,0,0.149448680551801,0.469737994575059,0.485618833104395,0.561803226808994,0,0.245668634623536,0.516628905878827,1.18800285728205,1.23633464639278,0,0,0.168336113954066,0.500474079487857,0.554128230968366,0,0.30648779579902,1.05166641234618,0.453728732640084,1.07633781413317,0.213557388818567,0,0,0.412210116953756,0.515281080091258,0.37223371266318,0.843881661206331,0.389748020644795,1.26216887122057,0.644349290496095,0.161646056818812,0,0.302256294682921,0.339121184620975,0.57978255948989,0.272746120590835,0,0.365921118388786,0.265059536642971,0.116193942869518,0.414644220061482,0.504641701751257,0,1.56449532329816,0,0,0.928735856063958,0,1.41968160047813,0.505754070234305,0.723033089650446,0.55146986366197,0.435758888184812,0.237270619111097,0.674156540800822,0.392442930250692,0.769494313892781,0,0,0,0,1.26755034821831,0.982827216677626,1.18157981336281,0,0.491953754172454,0.514703430895577,0,0,0.402115889646523,0.462942225792648,0.325808305310325,0,0,0.231860809950154,0.352226082707465,0,0,0,0.790204397959275,0.858486162094873,1.23108503043699,1.17002132569619,1.33768046059855,0,0.16798212819886,0.141775097242386,0.179117045405697,0,0.383382679165211,0.985326475791887,1.40877494421162,2.48793738648926,1.8735593944205,2.39860623510122,0.317489471460845,0.763976851116555,0,0,0.822619941626588,0.300343057843917,0.285826432630578,0,0.43596006883328,0.1466765716419,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0.823240336780769,0.325736184293735,0,0,0,0.871533458600294,0.199945982364114,1.2162378064119,0,0,0.239624855491583,0,0,0.434343920002738,0.821905290201534,0.179060963239896,0,1.57624608161542,0.646882724578552,0.898401253958239,1.01637849688985,0,0,0,0,0.749007023947182,0,1.24324654030811,0.981531933753119,0,0.271265023699736,0,0.178428988797162,0,0.35142424497814,0.601892199455438,0,2.0694614258501,0,0.368738337083406,1.21637060255316,0,0.343143423810856,0.620304078368662,1.07857100409308,0.853820462427555,0,0,0.604780586659361,0.496215615637554,0.460385919864187,0.280660094433074,0.512556597022804,0,0.482561763430822,0,0.308419387605311,0.887808626565635,1.31403449622095,1.03850885836724,0.581051892299796,1.0877350463246,0,0.368323955743585,0.229628896329213,0.364182336013434,0.524497659837696,0,0.308061348417659,0,0,0.527758144464379,0,0,0,0,0.270946437543853,0,0,0,0,0.438519753291869,0.261435451024901,1.02580050046556,0,0.325378394664303,1.23649213977267,0.824125183365091,1.07262349896764,0,0,3.21367859688319,0.096670718292122,0.154048617114644,0.460511024178389,0.137836572484531,0.429680979473094,0.290033387828457,0.170453254832202,0.267096106940212,0.661139661443912,0,0.255225424989168,0.708104465988849,0,0,0,0.924100740528266,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0.316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| ||
|short_description=p4@FAM46A | |||
}} | }} |
Latest revision as of 23:14, 19 September 2015
Short description: | p4@FAM46A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM46A_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_NM_017633, uc003pjg.2_5end |
EntrezGene: | FAM46A |
HGNC: | 18345 |
UniProt: | Q96IP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.47e-12 | 72 |
myeloid lineage restricted progenitor cell | 1.09e-11 | 66 |
granulocyte monocyte progenitor cell | 2.14e-11 | 67 |
monopoietic cell | 2.92e-09 | 59 |
monocyte | 2.92e-09 | 59 |
monoblast | 2.92e-09 | 59 |
promonocyte | 2.92e-09 | 59 |
leukocyte | 6.69e-09 | 136 |
macrophage dendritic cell progenitor | 9.44e-09 | 61 |
hematopoietic lineage restricted progenitor cell | 1.28e-08 | 120 |
myeloid cell | 8.29e-08 | 108 |
common myeloid progenitor | 8.29e-08 | 108 |
defensive cell | 2.30e-07 | 48 |
phagocyte | 2.30e-07 | 48 |
hematopoietic stem cell | 2.95e-07 | 168 |
nongranular leukocyte | 4.38e-07 | 115 |
hematopoietic oligopotent progenitor cell | 6.05e-07 | 161 |
hematopoietic multipotent progenitor cell | 6.05e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.33e-10 | 98 |
blood island | 3.33e-10 | 98 |
bone marrow | 6.29e-10 | 76 |
bone element | 2.37e-09 | 82 |
hemolymphoid system | 4.41e-09 | 108 |
adult organism | 5.37e-09 | 114 |
immune system | 5.10e-08 | 93 |
skeletal element | 7.82e-08 | 90 |
skeletal system | 1.55e-07 | 100 |
gland of diencephalon | 1.60e-07 | 4 |
neuroendocrine gland | 1.60e-07 | 4 |