FFCP PHASE1:Hg19::chr6:28891654..28891685,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:28891654..28891685,- to FFCP PHASE1:Hg19::chr6:28891654..28891685,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5987 | |EntrezGene=5987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9975 | |HGNC=9975 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_ENST00000481474_5end | |||
|cluster_id=chr6:28891654..28891685,- | |||
|description=CAGE_peak_2_at_TRIM27_5end | |||
|id=chr6:28891654..28891685,- | |||
|ontology_enrichment_celltype=CL:0000066!1.48e-20!254;CL:0000012!1.18e-17!682;CL:0000548!1.30e-17!679;CL:0000004!1.30e-17!679;CL:0000255!1.30e-17!679;CL:0000222!3.54e-14!119;CL:0000220!5.19e-13!246;CL:0002321!2.32e-12!248;CL:0000213!8.09e-12!57;CL:0000215!8.09e-12!57;CL:0000003!8.58e-12!722;CL:0000063!2.59e-11!578;CL:0000144!3.35e-09!625;CL:0000115!4.37e-09!35;CL:0002078!5.50e-09!44;CL:0000076!1.44e-08!62;CL:0002139!2.32e-08!24;CL:0000071!3.17e-08!18;CL:0002546!3.17e-08!18;CL:0002371!2.70e-07!591;CL:0000181!9.89e-07!12;CL:0000417!9.89e-07!12;CL:0000668!9.89e-07!12;CL:0000414!9.89e-07!12;CL:0000412!9.89e-07!12;CL:0000182!9.89e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.27e-08;24!CL:0000071;2.87e-08;18!CL:0000115;4.69e-08;36!CL:0000213;9.63e-08;58!CL:0000215;9.63e-08;58!CL:0002078;7.39e-07;45!CL:0000182;9.46e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.24e-21,253;CL:0000222,2.70e-14,121;CL:0002321,1.72e-12,250;CL:0000213,2.76e-12,58;CL:0000215,2.76e-12,58;CL:0000115,1.44e-09,36;CL:0002078,1.94e-09,45;CL:0000076,2.30e-08,63;CL:0002139,2.31e-08,24;CL:0000071,3.15e-08,18;CL:0002546,3.15e-08,18;CL:0000182,9.85e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;2.87e-08;18 | |||
|ontology_enrichment_disease=DOID:305!2.21e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.26e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0003914!1.42e-17!118;UBERON:0000490!1.19e-12!138;UBERON:0000055!2.72e-12!69;UBERON:0002049!3.96e-12!79;UBERON:0007798!3.96e-12!79;UBERON:0001981!3.06e-11!60;UBERON:0007500!3.06e-11!60;UBERON:0004537!3.06e-11!60;UBERON:0006965!3.06e-11!60;UBERON:0004535!1.42e-10!110;UBERON:0001637!4.55e-10!42;UBERON:0003509!4.55e-10!42;UBERON:0004572!4.55e-10!42;UBERON:0000926!7.48e-10!448;UBERON:0004120!7.48e-10!448;UBERON:0006603!7.48e-10!448;UBERON:0001009!7.66e-10!113;UBERON:0009569!3.97e-09!113;UBERON:0005172!1.62e-08!55;UBERON:0005173!1.62e-08!55;UBERON:0004872!1.75e-08!84;UBERON:0003104!2.55e-08!238;UBERON:0009142!2.55e-08!238;UBERON:0001986!3.17e-08!18;UBERON:0004638!3.17e-08!18;UBERON:0004852!3.17e-08!18;UBERON:0009497!4.15e-08!25;UBERON:0000015!4.15e-08!25;UBERON:0002423!4.15e-08!25;UBERON:0006235!4.15e-08!25;UBERON:0004161!4.15e-08!25;UBERON:0004573!5.42e-08!33;UBERON:0004571!5.42e-08!33;UBERON:0002100!7.46e-08!216;UBERON:0005256!2.06e-07!143;UBERON:0002417!2.41e-07!61;UBERON:0000916!2.41e-07!61;UBERON:0001048!2.76e-07!168;UBERON:0008835!2.94e-07!22;UBERON:0003894!2.94e-07!22;UBERON:0002107!6.78e-07!19;UBERON:0006925!6.78e-07!19;UBERON:0008836!6.78e-07!19;UBERON:0009854!8.70e-07!23;UBERON:0007499!8.99e-07!25;UBERON:0000487!9.84e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.87e-08;18!UBERON:0001986;2.87e-08;18!UBERON:0004852;2.87e-08;18!UBERON:0001637;3.43e-08;42!UBERON:0003509;3.43e-08;42!UBERON:0004572;3.43e-08;42!UBERON:0002423;5.24e-08;25!UBERON:0004573;3.26e-07;33!UBERON:0004571;3.26e-07;33!UBERON:0003914;5.61e-07;74!UBERON:0007500;6.25e-07;56!UBERON:0001981;6.25e-07;56!UBERON:0004537;6.25e-07;56!UBERON:0000487;6.30e-07;22!UBERON:0002107;8.18e-07;19!UBERON:0006925;8.18e-07;19!UBERON:0000055;8.80e-07;65 | |||
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| ||
|short_description=p2@TRIM27 | |||
}} | }} |
Latest revision as of 13:28, 17 September 2015
Short description: | p2@TRIM27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRIM27_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_ENST00000481474_5end |
EntrezGene: | TRIM27 |
HGNC: | 9975 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.24e-21 | 253 |
mesodermal cell | 2.70e-14 | 121 |
embryonic cell | 1.72e-12 | 250 |
lining cell | 2.76e-12 | 58 |
barrier cell | 2.76e-12 | 58 |
endothelial cell | 1.44e-09 | 36 |
meso-epithelial cell | 1.94e-09 | 45 |
squamous epithelial cell | 2.30e-08 | 63 |
endothelial cell of vascular tree | 2.31e-08 | 24 |
blood vessel endothelial cell | 3.15e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.15e-08 | 18 |
hepatocyte | 9.85e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.26e-07 | 106 |