FFCP PHASE1:Hg19::chr6:25279747..25279756,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55604 | |EntrezGene=55604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21581 | |HGNC=21581 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VZK9 | |UniProt=Q5VZK9 | ||
|association_with_transcript=91bp_to_ENST00000329474,ENST00000399313,NM_001173977,NM_017640_5end | |||
|cluster_id=chr6:25279747..25279756,+ | |||
|description=CAGE_peak_9_at_LRRC16A_5end | |||
|id=chr6:25279747..25279756,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;1.78e-29;1!CL:0002097;1.78e-15;2!CL:0000174;8.99e-11;3!CL:0002577;8.99e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,2.37e-29,1;CL:0002097,2.37e-15,2;CL:0002577,6.73e-11,3;CL:0000174,1.09e-10,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.39e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.58e-11!169;UBERON:0000925!2.58e-11!169;UBERON:0006595!2.58e-11!169;UBERON:0001007!7.41e-10!155;UBERON:0001555!7.41e-10!155;UBERON:0007026!7.41e-10!155;UBERON:0004921!5.73e-09!129;UBERON:0004185!5.73e-09!129;UBERON:0000077!2.66e-08!130;UBERON:0000481!2.36e-07!347;UBERON:0007023!2.36e-07!115;UBERON:0000064!3.27e-07!219;UBERON:0000062!4.70e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.78e-15;2!UBERON:0002757;1.78e-15;2!UBERON:0010134;1.78e-15;2!UBERON:0000078;1.78e-15;2!UBERON:0005408;1.78e-15;2!UBERON:0002012;1.78e-15;2!UBERON:0001899;1.78e-15;2!UBERON:0008886;1.78e-15;2!UBERON:0002369;8.99e-11;3!UBERON:0001235;8.99e-11;3!UBERON:0006858;8.99e-11;3!UBERON:0001987;2.11e-08;4!UBERON:0003296;2.11e-08;4!UBERON:0010133;2.11e-08;4!UBERON:0002784;2.11e-08;4!UBERON:0002108;5.70e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,2.05e-15,2;UBERON:0007497,2.05e-15,2;UBERON:0003643,2.05e-15,2;UBERON:0003504,2.05e-15,2;UBERON:0003469,2.05e-15,2;UBERON:0003496,2.05e-15,2;UBERON:0002012,2.05e-15,2;UBERON:0008886,2.05e-15,2;UBERON:0007303,2.05e-15,2;UBERON:0002061,2.05e-15,2;UBERON:0005432,2.05e-15,2;UBERON:0004363,2.05e-15,2;UBERON:0001905,2.74e-15,2;UBERON:0002757,2.74e-15,2;UBERON:0010134,2.74e-15,2;UBERON:0005408,2.74e-15,2;UBERON:0001899,2.74e-15,2;UBERON:0004145,9.90e-11,3;UBERON:0002369,1.09e-10,3;UBERON:0001235,1.09e-10,3;UBERON:0006858,1.09e-10,3;UBERON:0001987,1.70e-08,4;UBERON:0004340,1.70e-08,4;UBERON:0003296,2.61e-08,4;UBERON:0010133,2.61e-08,4;UBERON:0002784,2.61e-08,4;UBERON:0002108,5.08e-07,4;UBERON:0003498,6.04e-07,5;UBERON:0005985,6.04e-07,5 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.362578348774867,0,0.184161977871793,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.37428108081644,0,0.121360521749513,0,0,0.47748896947538,0,0.307160702099232,0,0,0,0,0,0.398495976502139,0.276283915531148,0.503865495708552,0,0,0,0,0.358042349351218,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0.262379999988587,0,0,0,0.236387681767936,0,0.291604613383254,0,0.885741385813839,0,0,0.110579259931225,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0.426905989478705,0.19980960958213,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.321506296930038,0.275078873194468,0,0.2249738915515,0.77380195455795,0.0607495566580247,0,0.315222829196793,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0.129282956361551,0.13223260174269,0.342173675768659,0.704815022316672,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0.415045904808692,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07220795687463,0,0,0,0,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0.294443155503077,0,0.366857197043358,0,0,0,0,0.0752103283492573,0,0,0,0,0.295712172434091,0,0,0,0.126831620387814,0,0,0,0,0,0,1.00885116665647,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0.280272163313789,0,0,0,0.0714765441766563,0.158013611732727,0.116241425368125,0,0,0,0.3414369541879,0,0,0,0,0,0,0,0,0.111855431797792,0.098150233615243,0.121917924982269,0,0,0,0,0.233939463462106,1.19370465096821,0,0,0.109940516745429,0.150962843566674,1.62065732026684,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0,0,0,0.203977659483963,0,0,0,0.378893491091197,0,0,0,0,0,0.129177819672012,0.0620747142958579,0,0.0636471582781649,0,0,0,0.0673520530145875,0.430333232356058,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.362578348774867,0,0.184161977871793,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.37428108081644,0,0.121360521749513,0,0,0.47748896947538,0,0.307160702099232,0,0,0,0,0,0.398495976502139,0.276283915531148,0.503865495708552,0,0,0,0,0.358042349351218,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0.262379999988587,0,0,0,0.236387681767936,0,0.291604613383254,0,0.885741385813839,0,0,0.110579259931225,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0.426905989478705,0.19980960958213,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.321506296930038,0.275078873194468,0,0.2249738915515,0.77380195455795,0.0607495566580247,0,0.315222829196793,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0.129282956361551,0.13223260174269,0.342173675768659,0.704815022316672,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0.415045904808692,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07220795687463,0,0,0,0,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0.294443155503077,0,0.366857197043358,0,0,0,0,0.0752103283492573,0,0,0,0,0.295712172434091,0,0,0,0.126831620387814,0,0,0,0,0,0,1.00885116665647,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0.280272163313789,0,0,0,0.0714765441766563,0.158013611732727,0.116241425368125,0,0,0,0.3414369541879,0,0,0,0,0,0,0,0,0.111855431797792,0.098150233615243,0.121917924982269,0,0,0,0,0.233939463462106,1.19370465096821,0,0,0.109940516745429,0.150962843566674,1.62065732026684,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0,0,0,0.203977659483963,0,0,0,0.378893491091197,0,0,0,0,0,0.129177819672012,0.0620747142958579,0,0.0636471582781649,0,0,0,0.0673520530145875,0.430333232356058,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 | ||
|short_description=p9@LRRC16A | |||
}} | }} |
Latest revision as of 07:39, 17 September 2015
Short description: | p9@LRRC16A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LRRC16A_5end |
Coexpression cluster: | NA |
Association with transcript: | 91bp_to_ENST00000329474, ENST00000399313, NM_001173977, NM_017640_5end |
EntrezGene: | LRRC16A |
HGNC: | 21581 |
UniProt: | Q5VZK9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 2.37e-29 | 1 |
cortical cell of adrenal gland | 2.37e-15 | 2 |
placental epithelial cell | 6.73e-11 | 3 |
steroid hormone secreting cell | 1.09e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 2.05e-15 | 2 |
developing epithelial placode | 2.05e-15 | 2 |
respiratory system arterial blood vessel | 2.05e-15 | 2 |
respiratory system blood vessel | 2.05e-15 | 2 |
respiratory system artery | 2.05e-15 | 2 |
head blood vessel | 2.05e-15 | 2 |
pulmonary artery | 2.05e-15 | 2 |
pulmonary vascular system | 2.05e-15 | 2 |
pharyngeal vasculature | 2.05e-15 | 2 |
truncus arteriosus | 2.05e-15 | 2 |
aortic sac | 2.05e-15 | 2 |
pharyngeal arch artery | 2.05e-15 | 2 |
pineal body | 2.74e-15 | 2 |
regional part of epithalamus | 2.74e-15 | 2 |
secretory circumventricular organ | 2.74e-15 | 2 |
circumventricular organ | 2.74e-15 | 2 |
epithalamus | 2.74e-15 | 2 |
outflow tract | 9.90e-11 | 3 |
adrenal gland | 1.09e-10 | 3 |
adrenal cortex | 1.09e-10 | 3 |
adrenal/interrenal gland | 1.09e-10 | 3 |
placenta | 1.70e-08 | 4 |
allantois | 1.70e-08 | 4 |
gland of diencephalon | 2.61e-08 | 4 |
neuroendocrine gland | 2.61e-08 | 4 |
regional part of diencephalon | 2.61e-08 | 4 |
small intestine | 5.08e-07 | 4 |
heart blood vessel | 6.04e-07 | 5 |
coronary vessel | 6.04e-07 | 5 |